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TcoF overview
TcoF: ATRX
GeneID: 221336
Name: Transcriptional regulator ATRX
Ensembl: ENSG00000085224
Species: Human
Class: NA
Family: Others
Disease: 36
Go term: 45
Pathway: --
Hallmark: 1
Super Enhancer:

--
Enhancer:

chrX:77039760-77041460 chrX:77394420-77395050 chrX:77317500-77318110 chrX:77319930-77322250 chrX:77323580-77326050 chrX:77359900-77362380 chrX:77436700-77437440 chrX:77442420-77443620 chrX:77445610-77447840 chrX:77166330-77168650 chrX:77192270-77194390 chrX:77422480-77423930 chrX:77363370-77364040

Promoter:

chrX:76760356-77041719

 ChIP-seq based regulatory details of ATRX
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
TcoF_00_30504 ATRX cell line K-562 GSM1821904 Bone Marrow ChIP-Atlas
TcoF_00_40299 ATRX cell line K-562_KOATRX GSM1821904 Bone Marrow ReMap
TcoF_00_30505 ATRX cell line K-562 GSM1821905 Bone Marrow ChIP-Atlas
TcoF_00_40300 ATRX cell line LAN6_KOATRX GSM1821905 Neural ReMap
TcoF_00_30650 ATRX cell line LAN-6 GSM2066632 Neural ChIP-Atlas
TcoF_00_30382 ATRX cell line Erythroblasts GSM551136 Blood ChIP-Atlas
TcoF_00_40672 ATRX cell line erythroid GSM551136 Blood ReMap
 Downstream target genes of ATRX
 Upstream regulatory details of ATRX
 Protein-protein interaction of ATRX
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
ATRX EZH2 Two-hybrid 9499421 9606 9606 BIOGRID
ATRX EZH2 Reconstituted Complex 9499421 9606 9606 BIOGRID
ATRX CCSER2 Two-hybrid 16169070 9606 9606 BIOGRID
ATRX KIAA1377 Two-hybrid 16169070 9606 9606 BIOGRID
ATRX LUC7L2 Two-hybrid 16169070 9606 9606 BIOGRID
ATRX PTN Two-hybrid 16169070 9606 9606 BIOGRID
ATRX PTPN4 Two-hybrid 16169070 9606 9606 BIOGRID
ATRX RAD51 Reconstituted Complex 10851248 9606 9606 BIOGRID
ATRX RAD51 Two-hybrid 10851248 9606 9606 BIOGRID
ATRX RAD51 Reconstituted Complex 15466868 9606 9606 BIOGRID
ATRX SMC1A Affinity Capture-Western 20159591 9606 9606 BIOGRID
ATRX H3F3A Affinity Capture-Western 20110566 9606 9606 BIOGRID
ATRX H3F3B Affinity Capture-Western 20110566 9606 9606 BIOGRID
ATRX DAXX Affinity Capture-Western 12953102 9606 9606 BIOGRID
ATRX DAXX Affinity Capture-MS 12953102 9606 9606 BIOGRID
ATRX DAXX Co-purification 12953102 9606 9606 BIOGRID
ATRX CBX5 Protein-peptide 15882967 9606 9606 BIOGRID
ATRX CBX5 Affinity Capture-Western 10699177 9606 9606 BIOGRID
ATRX DAXX Affinity Capture-Western 14990586 9606 9606 BIOGRID
ATRX DAXX Co-fractionation 14990586 9606 9606 BIOGRID
ATRX HIST1H3A Reconstituted Complex 21421568 9606 9606 BIOGRID
ATRX WRN Far Western 17118963 9606 9606 BIOGRID
ATRX ZBED1 Affinity Capture-Western 22021382 9606 9606 BIOGRID
ATRX ZBED1 Reconstituted Complex 22021382 9606 9606 BIOGRID
ATRX DAXX Affinity Capture-Western 20147399 9606 9606 BIOGRID
ATRX HIST2H3C Protein-peptide 21666679 9606 9606 BIOGRID
ATRX HIST2H3C Co-crystal Structure 21666679 9606 9606 BIOGRID
ATRX HIST2H3C Co-crystal Structure 21666677 9606 9606 BIOGRID
ATRX HIST2H3C Protein-peptide 21666677 9606 9606 BIOGRID
ATRX BLM Affinity Capture-Western 19671661 9606 9606 BIOGRID
ATRX BLM Reconstituted Complex 19671661 9606 9606 BIOGRID
ATRX RAD51 Affinity Capture-Western 19671661 9606 9606 BIOGRID
ATRX RAD51 Reconstituted Complex 19671661 9606 9606 BIOGRID
ATRX RAD51 Far Western 9321665 9606 9606 BIOGRID
ATRX RAD51 Reconstituted Complex 9321665 9606 9606 BIOGRID
ATRX RAD51 Two-hybrid 9321665 9606 9606 BIOGRID
ATRX DAXX Affinity Capture-Western 23135716 9606 9606 BIOGRID
ATRX DAXX Affinity Capture-MS 23329831 9606 9606 BIOGRID
ATRX PRKDC Affinity Capture-MS 23329831 9606 9606 BIOGRID
ATRX RAD50 Affinity Capture-MS 23329831 9606 9606 BIOGRID
ATRX XRCC5 Affinity Capture-MS 23329831 9606 9606 BIOGRID
ATRX MRE11A Affinity Capture-MS 23329831 9606 9606 BIOGRID
ATRX XRCC6 Affinity Capture-MS 23329831 9606 9606 BIOGRID
ATRX SUPT16H Affinity Capture-MS 23329831 9606 9606 BIOGRID
ATRX NBN Affinity Capture-MS 23329831 9606 9606 BIOGRID
ATRX SSRP1 Affinity Capture-MS 23329831 9606 9606 BIOGRID
ATRX HIST1H4J Affinity Capture-MS 23329831 9606 9606 BIOGRID
ATRX HIST2H2BE Affinity Capture-MS 23329831 9606 9606 BIOGRID
ATRX RPA1 Affinity Capture-MS 23329831 9606 9606 BIOGRID
ATRX TP53 Affinity Capture-MS 23329831 9606 9606 BIOGRID
ATRX HIST1H1C Affinity Capture-MS 23329831 9606 9606 BIOGRID
ATRX RAD9A Affinity Capture-MS 23329831 9606 9606 BIOGRID
ATRX HIST1H2BL Affinity Capture-MS 23329831 9606 9606 BIOGRID
ATRX HIST1H2AB Affinity Capture-MS 23329831 9606 9606 BIOGRID
ATRX RAD1 Affinity Capture-MS 23329831 9606 9606 BIOGRID
ATRX NBN Affinity Capture-Western 23329831 9606 9606 BIOGRID
ATRX RAD51 Reconstituted Complex 23801766 9606 9606 BIOGRID
ATRX ZNF274 Affinity Capture-Western 27029610 9606 9606 BIOGRID
ATRX TRIM28 Affinity Capture-Western 27029610 9606 9606 BIOGRID
ATRX SETDB1 Affinity Capture-Western 27029610 9606 9606 BIOGRID
ATRX DAXX Affinity Capture-Western 27029610 9606 9606 BIOGRID
ATRX EAF1 Affinity Capture-MS 27173435 9606 9606 BIOGRID
ATRX NAF1 Affinity Capture-MS 27173435 9606 9606 BIOGRID
ATRX POLD1 Affinity Capture-MS 27173435 9606 9606 BIOGRID
ATRX RBM14 Affinity Capture-MS 27173435 9606 9606 BIOGRID
ATRX MFAP1 Affinity Capture-MS 27173435 9606 9606 BIOGRID
ATRX MRE11A Affinity Capture-Western 27171262 9606 9606 BIOGRID
ATRX NBN Affinity Capture-Western 27171262 9606 9606 BIOGRID
ATRX H2AFX Co-localization 28190324 9606 9606 BIOGRID
ATRX RASSF1 Protein-peptide 28875283 9606 9606 BIOGRID
ATRX MDM2 Protein-peptide 28875283 9606 9606 BIOGRID
ATRX TP53 Protein-peptide 28875283 9606 9606 BIOGRID
ATRX MEN1 Affinity Capture-Western 27872097 9606 9606 BIOGRID
ATRX DAXX Affinity Capture-Western 27872097 9606 9606 BIOGRID
ATRX DAXX Reconstituted Complex 29084956 9606 9606 BIOGRID
ATRX RAD51 Far Western 28976962 9606 9606 BIOGRID
ATRX AKT1 Affinity Capture-Western 24462114 9606 9606 BIOGRID
ATRX PCNA Affinity Capture-Western 29937341 9606 9606 BIOGRID
ATRX RFC1 Affinity Capture-Western 29937341 9606 9606 BIOGRID
ATRX DAXX Affinity Capture-Western 29937341 9606 9606 BIOGRID
ATRX H3F3A Affinity Capture-Western 29937341 9606 9606 BIOGRID
ATRX H3F3B Affinity Capture-Western 29937341 9606 9606 BIOGRID
ATRX RAD51 Two-hybrid 16990250 9606 9606 BIOGRID
ATRX WWOX Co-localization 31180492 9606 9606 BIOGRID
ATRX HNRNPD Proximity Label-MS 30021884 9606 9606 BIOGRID
ATRX NOMO1 Proximity Label-MS 30021884 9606 9606 BIOGRID
ATRX RRBP1 Proximity Label-MS 30021884 9606 9606 BIOGRID
ATRX PLN Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX RRM2 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX STX18 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX PKMYT1 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX SMC1A Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX CDCA8 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX WDR33 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX WEE1 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX EIF2S3 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX IARS2 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX HSPA9 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX EIF3B Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX RABGGTA Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX POMK Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX VCP Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX TUBA1B Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX CABIN1 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX ASF1A Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX RNMT Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX MCM4 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX NUDCD3 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX SKA3 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX ATP6V1B2 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX RPL7A Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX RBM39 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX TIPIN Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX PSMA2 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX CSTF1 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX DYNLRB1 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX TRA2B Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX HAT1 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX TOPBP1 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX DDX46 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX RBM27 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX CENPN Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX PSMG4 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX DBR1 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX XKRX Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX SMC5 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX DGCR14 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX SMC6 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX BTF3L4 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX SMN1 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX SMARCD1 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX C6orf15 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX TRAPPC4 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX IL1R2 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX PDZD7 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX UBE2J1 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX C14orf166 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX CDK12 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX TUBB Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX RGPD6 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX COASY Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX FNTB Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX TUBGCP6 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX ZAP70 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX CSTF3 Synthetic Lethality 31551363 9606 9606 BIOGRID
ATRX DAXX Co-fractionation 31631027 9606 9606 BIOGRID
ATRX DAXX Affinity Capture-Western 31631027 9606 9606 BIOGRID
ATRX HAT1 Affinity Capture-MS 24981860 9606 9606 BIOGRID
ATRX RAD51 Affinity Capture-Western 32457312 9606 9606 BIOGRID
ATRX MUS81 Reconstituted Complex 19129197 9606 559292 BIOGRID
ATRX MMS4 Reconstituted Complex 19129197 9606 559292 BIOGRID
ATRX UL82 Affinity Capture-Western 23135716 9606 10359 BIOGRID
 Annotation of ATRX
 TCGA cancer survival map of ATRX


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Expression of  ATRX
 Disease information of  ATRX