TcoF overview
TcoF: BPTF
GeneID: 9044
Name: Nucleosome-remodeling factor subunit BPTF
Ensembl: ENSG00000171634
Species: Human
Class: NA
Family: Bromodomain
Disease: 4
Go term: 20
Pathway: 1
Hallmark: --
Super Enhancer:

chr17:65958101-65972319 chr17:65796291-65833769 chr17:65797083-65826243 chr17:65800307-65831888 chr17:65796398-65827525 chr17:65807506-65824412 chr17:65796166-65856253 chr17:65820548-65865863 chr17:65796557-65824104

Enhancer:

chr17:65505590-65507080 chr17:65628360-65630860 chr17:65584620-65586120 chr17:65822450-65824280 chr17:65988220-65989010 chr17:65989350-65989530 chr17:66031960-66033220 chr17:66221000-66221700 chr17:66227450-66229880 chr17:65515420-65517400 chr17:65645200-65646620 chr17:65646830-65647440 chr17:65808700-65810420 chr17:65571930-65574300 chr17:65824840-65826250 chr17:65714200-65715790 chr17:65666900-65668630 chr17:65438860-65439670 chr17:65439770-65440820 chr17:65974470-65975350 chr17:66057020-66058730 chr17:66098100-66099080 chr17:65256010-65257470 chr17:65482410-65483960 chr17:65507100-65507720 chr17:65530320-65532400 chr17:66045020-66045790 chr17:65207450-65208680 chr17:65407350-65407850 chr17:65407930-65408670 chr17:65413950-65414460 chr17:65420480-65420990 chr17:65463500-65464640 chr17:65464870-65465990 chr17:65466250-65466650 chr17:65510580-65512900 chr17:65526840-65528910 chr17:65542150-65544450 chr17:65571070-65571850 chr17:65578770-65579500 chr17:65580830-65581950 chr17:66085140-66086920 chr17:66099200-66099770 chr17:66244850-66246320 chr17:65502460-65504440 chr17:66255570-66257500 chr17:65660710-65661580 chr17:65918200-65918950 chr17:65172560-65174740 chr17:65826410-65827940 chr17:65842760-65843200 chr17:65848810-65849640 chr17:65973230-65973700 chr17:66179020-66179680 chr17:65851360-65853830 chr17:66209140-66210720 chr17:66230460-66232320 chr17:65331550-65334020 chr17:65360170-65362520 chr17:65643810-65644060 chr17:65644220-65645160 chr17:65431120-65432990 chr17:65444470-65444990 chr17:65513980-65515090 chr17:65887140-65887950 chr17:65863570-65865420 chr17:65434640-65435270 chr17:65995350-65995910 chr17:65462390-65463170

Promoter:

chr17:65821619-65980494

 ChIP-seq based regulatory details of BPTF
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
TcoF_00_31278 BPTF cell line T-47D GSM1571861 Breast ChIP-Atlas
TcoF_00_31279 BPTF cell line T-47D GSM1571862 Breast ChIP-Atlas
TcoF_00_30481 BPTF cell line Erythroid Cells GSM1698350 Blood ChIP-Atlas
 Downstream target genes of BPTF
 Protein-protein interaction of BPTF
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
BPTF MAZ Two-hybrid 10727212 9606 9606 BIOGRID
BPTF MAZ Reconstituted Complex 10727212 9606 9606 BIOGRID
BPTF HIST1H3A Affinity Capture-Western 16728976 9606 9606 BIOGRID
BPTF RBBP4 Affinity Capture-Western 14609955 9606 9606 BIOGRID
BPTF RBBP7 Affinity Capture-Western 14609955 9606 9606 BIOGRID
BPTF SMARCA1 Affinity Capture-Western 14609955 9606 9606 BIOGRID
BPTF H3F3A Reconstituted Complex 16728978 9606 9606 BIOGRID
BPTF H3F3A Co-crystal Structure 16728978 9606 9606 BIOGRID
BPTF HIST1H4I Reconstituted Complex 21596426 9606 9606 BIOGRID
BPTF HIST1H4I Co-crystal Structure 21596426 9606 9606 BIOGRID
BPTF KEAP1 Two-hybrid 15379550 9606 9606 BIOGRID
BPTF MAZ Two-hybrid 15379550 9606 9606 BIOGRID
BPTF KEAP1 Reconstituted Complex 15379550 9606 9606 BIOGRID
BPTF KEAP1 Co-localization 15379550 9606 9606 BIOGRID
BPTF HMGXB4 Co-fractionation 22939629 9606 9606 BIOGRID
BPTF NCOR1 Co-fractionation 22939629 9606 9606 BIOGRID
BPTF SMARCD2 Co-fractionation 22939629 9606 9606 BIOGRID
BPTF NFE2L2 Reconstituted Complex 15379550 9606 9606 BIOGRID
BPTF TFAP4 Co-fractionation 26344197 9606 9606 BIOGRID
BPTF HIST1H2BH Proximity Label-MS 30021884 9606 9606 BIOGRID
BPTF LIN9 Affinity Capture-MS 24981860 9606 9606 BIOGRID
BPTF SMARCA5 Affinity Capture-MS 24981860 9606 9606 BIOGRID
BPTF CHD5 Affinity Capture-MS 24981860 9606 9606 BIOGRID
BPTF H3.1 Reconstituted Complex 24420930 9606 9913 BIOGRID
 Annotation of BPTF
 TCGA cancer survival map of BPTF


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  BPTF