TcoF overview
TcoF: BRIP1
GeneID: 811
Name: Fanconi anemia group J protein
Ensembl: ENSG00000136492
Species: Human
Class: NA
Family: Others
Disease: 28
Go term: 29
Pathway: 11
Hallmark: 2
Super Enhancer:

chr17:59948013-59984351 chr17:59948374-59993070 chr17:59720774-59790459 chr17:59720761-59793172 chr17:59936525-59942345

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Enhancer:

chr17:59910510-59911700 chr17:59761500-59763190 chr17:59938930-59940640 chr17:60004020-60005010 chr17:60140660-60142500 chr17:60036850-60038050 chr17:60102360-60103720 chr17:59981950-59982870 chr17:60157370-60159470 chr17:59886460-59888140 chr17:60214990-60215270 chr17:60218010-60218350 chr17:60676320-60678010 chr17:60039180-60040110 chr17:60127160-60128320 chr17:60327160-60329080 chr17:60345120-60345500 chr17:59998100-59999070 chr17:60169930-60172380 chr17:59573800-59574220 chr17:59571450-59573560 chr17:59882480-59883820 chr17:60240310-60240680 chr17:60196230-60197340 chr17:60198310-60199030 chr17:60283760-60285140 chr17:59570150-59570840

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Promoter:

chr17:59758627-59940882

False
 ChIP-seq based regulatory details of BRIP1
select * from encode where Experiment_target='BRIP1'
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
 Downstream target genes of BRIP1
 Protein-protein interaction of BRIP1
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
BRIP1 BRCA1 Affinity Capture-Western 15242590 9606 9606 BIOGRID
BRIP1 BLM Affinity Capture-Western 21240188 9606 9606 BIOGRID
BRIP1 BRCA1 Affinity Capture-Western 21240188 9606 9606 BIOGRID
BRIP1 BLM Reconstituted Complex 21240188 9606 9606 BIOGRID
BRIP1 PMS2 Affinity Capture-Western 20978114 9606 9606 BIOGRID
BRIP1 MLH1 Affinity Capture-Western 20978114 9606 9606 BIOGRID
BRIP1 MLH1 Affinity Capture-Western 20173781 9606 9606 BIOGRID
BRIP1 BRCA1 Affinity Capture-Western 20173781 9606 9606 BIOGRID
BRIP1 TOPBP1 Affinity Capture-Western 20159562 9606 9606 BIOGRID
BRIP1 RPA1 Co-localization 20159562 9606 9606 BIOGRID
BRIP1 RPA1 Affinity Capture-Western 17596542 9606 9606 BIOGRID
BRIP1 MLH1 Affinity Capture-Western 17581638 9606 9606 BIOGRID
BRIP1 PMS2 Affinity Capture-Western 17581638 9606 9606 BIOGRID
BRIP1 BRCA1 Affinity Capture-Western 17581638 9606 9606 BIOGRID
BRIP1 PMS2 Affinity Capture-MS 17581638 9606 9606 BIOGRID
BRIP1 BRCA1 Affinity Capture-MS 17581638 9606 9606 BIOGRID
BRIP1 MLH1 Affinity Capture-MS 17581638 9606 9606 BIOGRID
BRIP1 BRCA1 Affinity Capture-Western 17596542 9606 9606 BIOGRID
BRIP1 BRCA1 Affinity Capture-Western 22032289 9606 9606 BIOGRID
BRIP1 BARD1 Affinity Capture-Western 27399284 9606 9606 BIOGRID
BRIP1 BRCA1 Affinity Capture-Western 27399284 9606 9606 BIOGRID
BRIP1 CBX3 Affinity Capture-Western 27399284 9606 9606 BIOGRID
BRIP1 HIST1H3A Affinity Capture-Western 27399284 9606 9606 BIOGRID
BRIP1 MLH1 Affinity Capture-Western 24966277 9606 9606 BIOGRID
BRIP1 MSH2 Phenotypic Suppression 24966277 9606 9606 BIOGRID
BRIP1 MLH1 Affinity Capture-Western 22968820 9606 9606 BIOGRID
BRIP1 PMS2 Affinity Capture-Western 22968820 9606 9606 BIOGRID
BRIP1 FANCD2 Affinity Capture-Western 26336824 9606 9606 BIOGRID
BRIP1 BRIP1 Co-purification 22582397 9606 9606 BIOGRID
BRIP1 BRIP1 Reconstituted Complex 22582397 9606 9606 BIOGRID
BRIP1 MRE11A Affinity Capture-Western 23530059 9606 9606 BIOGRID
BRIP1 RAD50 Affinity Capture-Western 23530059 9606 9606 BIOGRID
BRIP1 BRCA1 Affinity Capture-Western 23530059 9606 9606 BIOGRID
BRIP1 MRE11A Reconstituted Complex 23530059 9606 9606 BIOGRID
BRIP1 TOPBP1 Affinity Capture-Western 23157317 9606 9606 BIOGRID
BRIP1 FANCD2 Affinity Capture-Western 25070891 9606 9606 BIOGRID
BRIP1 FANCD2 Co-fractionation 25070891 9606 9606 BIOGRID
BRIP1 FANCD2 Reconstituted Complex 25070891 9606 9606 BIOGRID
BRIP1 SPTA1 Affinity Capture-Western 16889989 9606 9606 BIOGRID
BRIP1 BRIP1 Co-fractionation 24573678 9606 9606 BIOGRID
BRIP1 TOPBP1 Affinity Capture-Western 24573678 9606 9606 BIOGRID
BRIP1 MLH1 Affinity Capture-Western 24573678 9606 9606 BIOGRID
BRIP1 BRCA1 Affinity Capture-Western 24573678 9606 9606 BIOGRID
BRIP1 POLN Affinity Capture-Western 26269593 9606 9606 BIOGRID
BRIP1 MMS19 Affinity Capture-Western 23585563 9606 9606 BIOGRID
BRIP1 MLH1 Affinity Capture-Western 23585563 9606 9606 BIOGRID
BRIP1 FAM96B Affinity Capture-Western 23585563 9606 9606 BIOGRID
BRIP1 NARFL Affinity Capture-Western 23585563 9606 9606 BIOGRID
BRIP1 BRCA1 Affinity Capture-Western 17525340 9606 9606 BIOGRID
BRIP1 BARD1 Affinity Capture-Western 17664283 9606 9606 BIOGRID
BRIP1 BRCA2 Affinity Capture-Western 17664283 9606 9606 BIOGRID
BRIP1 BRCA1 Affinity Capture-Western 17664283 9606 9606 BIOGRID
BRIP1 BARD1 Affinity Capture-Western 16391231 9606 9606 BIOGRID
BRIP1 TOPBP1 Affinity Capture-Western 16391231 9606 9606 BIOGRID
BRIP1 MLH1 Affinity Capture-Western 16391231 9606 9606 BIOGRID
BRIP1 MRE11A Affinity Capture-Western 16391231 9606 9606 BIOGRID
BRIP1 NBN Affinity Capture-Western 16391231 9606 9606 BIOGRID
BRIP1 BRCA1 Affinity Capture-Western 16391231 9606 9606 BIOGRID
BRIP1 TOPBP1 Affinity Capture-Western 21127055 9606 9606 BIOGRID
BRIP1 BRCA1 Affinity Capture-Western 18628483 9606 9606 BIOGRID
BRIP1 BARD1 Affinity Capture-Western 18628483 9606 9606 BIOGRID
BRIP1 BRCA1 Affinity Capture-Western 28911102 9606 9606 BIOGRID
 Annotation of BRIP1
 TCGA cancer survival map of BRIP1


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  BRIP1