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TcoF overview
TcoF: BRIP1
GeneID: 811
Name: Fanconi anemia group J protein
Ensembl: ENSG00000136492
Species: Human
Class: NA
Family: Others
Disease: 28
Go term: 29
Pathway: 11
Hallmark: 2
Super Enhancer:

chr17:59948013-59984351 chr17:59948374-59993070 chr17:59720774-59790459 chr17:59720761-59793172 chr17:59936525-59942345
Enhancer:

chr17:59910510-59911700 chr17:59761500-59763190 chr17:59938930-59940640 chr17:60004020-60005010 chr17:60140660-60142500 chr17:60036850-60038050 chr17:60102360-60103720 chr17:59981950-59982870 chr17:60157370-60159470 chr17:59886460-59888140 chr17:60214990-60215270 chr17:60218010-60218350 chr17:60676320-60678010 chr17:60039180-60040110 chr17:60127160-60128320 chr17:60327160-60329080 chr17:60345120-60345500 chr17:59998100-59999070 chr17:60169930-60172380 chr17:59573800-59574220 chr17:59571450-59573560 chr17:59882480-59883820 chr17:60240310-60240680 chr17:60196230-60197340 chr17:60198310-60199030 chr17:60283760-60285140 chr17:59570150-59570840

Promoter:

chr17:59758627-59940882

 ChIP-seq based regulatory details of BRIP1
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
 Downstream target genes of BRIP1
 Upstream regulatory details of BRIP1
 Protein-protein interaction of BRIP1
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
BRIP1 BRCA1 Affinity Capture-Western 15242590 9606 9606 BIOGRID
BRIP1 BLM Affinity Capture-Western 21240188 9606 9606 BIOGRID
BRIP1 BRCA1 Affinity Capture-Western 21240188 9606 9606 BIOGRID
BRIP1 BLM Reconstituted Complex 21240188 9606 9606 BIOGRID
BRIP1 PMS2 Affinity Capture-Western 20978114 9606 9606 BIOGRID
BRIP1 MLH1 Affinity Capture-Western 20978114 9606 9606 BIOGRID
BRIP1 MLH1 Affinity Capture-Western 20173781 9606 9606 BIOGRID
BRIP1 BRCA1 Affinity Capture-Western 20173781 9606 9606 BIOGRID
BRIP1 TOPBP1 Affinity Capture-Western 20159562 9606 9606 BIOGRID
BRIP1 RPA1 Co-localization 20159562 9606 9606 BIOGRID
BRIP1 RPA1 Affinity Capture-Western 17596542 9606 9606 BIOGRID
BRIP1 MLH1 Affinity Capture-Western 17581638 9606 9606 BIOGRID
BRIP1 PMS2 Affinity Capture-Western 17581638 9606 9606 BIOGRID
BRIP1 BRCA1 Affinity Capture-Western 17581638 9606 9606 BIOGRID
BRIP1 PMS2 Affinity Capture-MS 17581638 9606 9606 BIOGRID
BRIP1 BRCA1 Affinity Capture-MS 17581638 9606 9606 BIOGRID
BRIP1 MLH1 Affinity Capture-MS 17581638 9606 9606 BIOGRID
BRIP1 BRCA1 Affinity Capture-Western 17596542 9606 9606 BIOGRID
BRIP1 BRCA1 Affinity Capture-Western 22032289 9606 9606 BIOGRID
BRIP1 BARD1 Affinity Capture-Western 27399284 9606 9606 BIOGRID
BRIP1 BRCA1 Affinity Capture-Western 27399284 9606 9606 BIOGRID
BRIP1 CBX3 Affinity Capture-Western 27399284 9606 9606 BIOGRID
BRIP1 HIST1H3A Affinity Capture-Western 27399284 9606 9606 BIOGRID
BRIP1 MLH1 Affinity Capture-Western 24966277 9606 9606 BIOGRID
BRIP1 MSH2 Phenotypic Suppression 24966277 9606 9606 BIOGRID
BRIP1 MLH1 Affinity Capture-Western 22968820 9606 9606 BIOGRID
BRIP1 PMS2 Affinity Capture-Western 22968820 9606 9606 BIOGRID
BRIP1 FANCD2 Affinity Capture-Western 26336824 9606 9606 BIOGRID
BRIP1 BRIP1 Co-purification 22582397 9606 9606 BIOGRID
BRIP1 BRIP1 Reconstituted Complex 22582397 9606 9606 BIOGRID
BRIP1 MRE11A Affinity Capture-Western 23530059 9606 9606 BIOGRID
BRIP1 RAD50 Affinity Capture-Western 23530059 9606 9606 BIOGRID
BRIP1 BRCA1 Affinity Capture-Western 23530059 9606 9606 BIOGRID
BRIP1 MRE11A Reconstituted Complex 23530059 9606 9606 BIOGRID
BRIP1 TOPBP1 Affinity Capture-Western 23157317 9606 9606 BIOGRID
BRIP1 FANCD2 Affinity Capture-Western 25070891 9606 9606 BIOGRID
BRIP1 FANCD2 Co-fractionation 25070891 9606 9606 BIOGRID
BRIP1 FANCD2 Reconstituted Complex 25070891 9606 9606 BIOGRID
BRIP1 SPTA1 Affinity Capture-Western 16889989 9606 9606 BIOGRID
BRIP1 BRIP1 Co-fractionation 24573678 9606 9606 BIOGRID
BRIP1 TOPBP1 Affinity Capture-Western 24573678 9606 9606 BIOGRID
BRIP1 MLH1 Affinity Capture-Western 24573678 9606 9606 BIOGRID
BRIP1 BRCA1 Affinity Capture-Western 24573678 9606 9606 BIOGRID
BRIP1 POLN Affinity Capture-Western 26269593 9606 9606 BIOGRID
BRIP1 MMS19 Affinity Capture-Western 23585563 9606 9606 BIOGRID
BRIP1 MLH1 Affinity Capture-Western 23585563 9606 9606 BIOGRID
BRIP1 FAM96B Affinity Capture-Western 23585563 9606 9606 BIOGRID
BRIP1 NARFL Affinity Capture-Western 23585563 9606 9606 BIOGRID
BRIP1 BRCA1 Affinity Capture-Western 17525340 9606 9606 BIOGRID
BRIP1 BARD1 Affinity Capture-Western 17664283 9606 9606 BIOGRID
BRIP1 BRCA2 Affinity Capture-Western 17664283 9606 9606 BIOGRID
BRIP1 BRCA1 Affinity Capture-Western 17664283 9606 9606 BIOGRID
BRIP1 BARD1 Affinity Capture-Western 16391231 9606 9606 BIOGRID
BRIP1 TOPBP1 Affinity Capture-Western 16391231 9606 9606 BIOGRID
BRIP1 MLH1 Affinity Capture-Western 16391231 9606 9606 BIOGRID
BRIP1 MRE11A Affinity Capture-Western 16391231 9606 9606 BIOGRID
BRIP1 NBN Affinity Capture-Western 16391231 9606 9606 BIOGRID
BRIP1 BRCA1 Affinity Capture-Western 16391231 9606 9606 BIOGRID
BRIP1 TOPBP1 Affinity Capture-Western 21127055 9606 9606 BIOGRID
BRIP1 BRCA1 Affinity Capture-Western 18628483 9606 9606 BIOGRID
BRIP1 BARD1 Affinity Capture-Western 18628483 9606 9606 BIOGRID
BRIP1 BRCA1 Affinity Capture-Western 28911102 9606 9606 BIOGRID
 Annotation of BRIP1
 TCGA cancer survival map of BRIP1


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Expression of  BRIP1
 Disease information of  BRIP1