TcoF overview
TcoF: CBX1
GeneID: 55536
Name: Chromobox protein homolog 1
Ensembl: ENSG00000108468
Species: Human
Class: class 2
Family: Others
Disease: 2
Go term: 18
Pathway: --
Hallmark: --
Super Enhancer:

--
Enhancer:

chr17:45886840-45887950 chr17:45897730-45899030 chr17:45918210-45918570 chr17:45973660-45975750 chr17:46048520-46048720 chr17:46048770-46050880 chr17:46114290-46114520 chr17:46125820-46127970 chr17:46103840-46105830 chr17:45786820-45787860 chr17:45888040-45888130 chr17:45776140-45776680 chr17:45925850-45928280 chr17:45568560-45569750 chr17:45648750-45651220 chr17:45720730-45722200 chr17:45736030-45738480 chr17:45742520-45743800 chr17:45917740-45918030 chr17:46023770-46023970 chr17:46190020-46190660 chr17:46055410-46056190 chr17:45740540-45741520 chr17:46188130-46189390 chr17:46189450-46189930 chr17:46922460-46923390 chr17:45608920-45611110 chr17:45917010-45917550 chr17:45981620-45982080 chr17:45982150-45983700 chr17:45984150-45984650 chr17:45985230-45985880 chr17:46128990-46131430 chr17:46132080-46133740 chr17:46176550-46178110 chr17:46152460-46152650 chr17:46064140-46065730 chr17:46072050-46074200 chr17:46269040-46270410 chr17:45681420-45682690 chr17:45588540-45590990 chr17:45741640-45742420 chr17:45897460-45897560 chr17:46041180-46042890 chr17:46053380-46054070 chr17:45820130-45820430 chr17:46212380-46212970 chr17:45778540-45780380 chr17:45780550-45781000 chr17:45783360-45785750 chr17:45811310-45813520 chr17:45818440-45819970 chr17:46190760-46192380 chr17:46502910-46504440 chr17:46555170-46556500 chr17:46587820-46589710 chr17:46589920-46592110 chr17:46239930-46241840 chr17:46582200-46584690 chr17:46621780-46621880 chr17:46687340-46687880 chr17:45888200-45890010 chr17:45897140-45897330 chr17:45696530-45697100 chr17:45697150-45699130 chr17:45728740-45730050 chr17:45774560-45775960 chr17:46113300-46114210 chr17:46011980-46013890 chr17:46271320-46273520 chr17:46323900-46325030 chr17:46563560-46565150 chr17:45951700-45953800 chr17:46075900-46078180 chr17:46143060-46145040 chr17:46593410-46593830 chr17:45949270-45951340 chr17:45992760-45993520 chr17:46203930-46205760 chr17:46030630-46032360 chr17:46133960-46134390 chr17:46134480-46134700 chr17:46134860-46135650 chr17:46162310-46163520 chr17:46276140-46277020 chr17:46320850-46322890 chr17:46341720-46343970 chr17:46409860-46411680 chr17:46547660-46548880 chr17:46548930-46550950 chr17:46598950-46601340 chr17:46630000-46630990 chr17:46631100-46632890 chr17:46681410-46681840 chr17:46677910-46678780 chr17:46002910-46003330 chr17:45797990-45798970 chr17:45799070-45799910 chr17:46141470-46142050 chr17:45913910-45914110 chr17:45916060-45916150 chr17:46074950-46075690 chr17:45947320-45947910 chr17:45954510-45956950 chr17:46367260-46368360 chr17:46105870-46106490 chr17:46233220-46233780 chr17:46216590-46218720 chr17:46573920-46576360 chr17:46577180-46579420 chr17:46701640-46703110 chr17:46058160-46058520 chr17:46120170-46120680 chr17:46632980-46635440 chr17:46679030-46679430 chr17:46681980-46682220

Promoter:

chr17:46147414-46178840

 ChIP-seq based regulatory details of CBX1
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
TcoF_00_10081 CBX1 cell line K562 - Bone Marrow ENCODE
TcoF_00_20568 CBX1 cell line HepG2 - Liver Cistrome
TcoF_00_20712 CBX1 cell line K562 - Bone Marrow Cistrome
TcoF_00_20416 CBX1 cell line HEK293 GSM971950 Embryonic Kidney Cistrome
 Downstream target genes of CBX1
 Protein-protein interaction of CBX1
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
CBX1 C11orf30 Reconstituted Complex 14651845 9606 9606 BIOGRID
CBX1 SUV39H1 Affinity Capture-Western 10202156 9606 9606 BIOGRID
CBX1 RPL12 Two-hybrid 16169070 9606 9606 BIOGRID
CBX1 UCHL1 Two-hybrid 16169070 9606 9606 BIOGRID
CBX1 LRIF1 Two-hybrid 16169070 9606 9606 BIOGRID
CBX1 TRIM28 Affinity Capture-Western 11336697 9606 9606 BIOGRID
CBX1 CBX1 Affinity Capture-Western 11336697 9606 9606 BIOGRID
CBX1 CBX3 Affinity Capture-Western 11336697 9606 9606 BIOGRID
CBX1 CBX5 Affinity Capture-Western 11336697 9606 9606 BIOGRID
CBX1 CBX1 Reconstituted Complex 11336697 9606 9606 BIOGRID
CBX1 CBX3 Reconstituted Complex 11336697 9606 9606 BIOGRID
CBX1 CBX5 Reconstituted Complex 11336697 9606 9606 BIOGRID
CBX1 C11orf30 Co-crystal Structure 16615912 9606 9606 BIOGRID
CBX1 CBX1 Co-crystal Structure 16615912 9606 9606 BIOGRID
CBX1 TRIM28 Affinity Capture-Western 18590578 9606 9606 BIOGRID
CBX1 TRIM28 Reconstituted Complex 18590578 9606 9606 BIOGRID
CBX1 HIST1H3A Reconstituted Complex 15960974 9606 9606 BIOGRID
CBX1 TRIM28 Reconstituted Complex 10330177 9606 9606 BIOGRID
CBX1 CBX3 Co-localization 17314413 9606 9606 BIOGRID
CBX1 CBX5 Co-localization 17314413 9606 9606 BIOGRID
CBX1 HIST1H3A Co-crystal Structure 11882902 9606 9606 BIOGRID
CBX1 CHD4 Affinity Capture-MS 21888893 9606 9606 BIOGRID
CBX1 POGZ Affinity Capture-MS 21888893 9606 9606 BIOGRID
CBX1 ADNP Affinity Capture-MS 21888893 9606 9606 BIOGRID
CBX1 ADNP2 Affinity Capture-MS 21888893 9606 9606 BIOGRID
CBX1 TRIM28 Affinity Capture-MS 21888893 9606 9606 BIOGRID
CBX1 XRCC6 Affinity Capture-MS 21888893 9606 9606 BIOGRID
CBX1 CHAF1A Affinity Capture-MS 21888893 9606 9606 BIOGRID
CBX1 CBX3 Affinity Capture-MS 21888893 9606 9606 BIOGRID
CBX1 CBX5 Affinity Capture-MS 21888893 9606 9606 BIOGRID
CBX1 H2AFB1 Affinity Capture-MS 21888893 9606 9606 BIOGRID
CBX1 HIST1H4F Affinity Capture-MS 21888893 9606 9606 BIOGRID
CBX1 ADNP Affinity Capture-Western 21888893 9606 9606 BIOGRID
CBX1 ADNP2 Affinity Capture-Western 21888893 9606 9606 BIOGRID
CBX1 PCNA PCA 22617335 9606 9606 BIOGRID
CBX1 HIST3H3 Protein-peptide 22606318 9606 9606 BIOGRID
CBX1 HIST3H3 Affinity Capture-Western 22606318 9606 9606 BIOGRID
CBX1 KLF11 Reconstituted Complex 22318730 9606 9606 BIOGRID
CBX1 VTN Two-hybrid 21988832 9606 9606 BIOGRID
CBX1 ZNF280D Affinity Capture-MS 20850016 9606 9606 BIOGRID
CBX1 ADNP Affinity Capture-MS 20850016 9606 9606 BIOGRID
CBX1 AHDC1 Affinity Capture-MS 20850016 9606 9606 BIOGRID
CBX1 CHD4 Affinity Capture-MS 20850016 9606 9606 BIOGRID
CBX1 POGZ Affinity Capture-MS 20850016 9606 9606 BIOGRID
CBX1 CHAMP1 Affinity Capture-MS 20850016 9606 9606 BIOGRID
CBX1 THRAP3 Affinity Capture-MS 20850016 9606 9606 BIOGRID
CBX1 CUL4B Affinity Capture-Western 24292684 9606 9606 BIOGRID
CBX1 ADNP Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 ADNP2 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 AHDC1 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 ARG1 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 CHAF1A Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 CHAF1B Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 CBX3 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 CBX5 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 CCDC71L Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 CHAMP1 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 CHD4 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 C19orf68 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 DSN1 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 DYNLL1 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 E2F6 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 EHMT1 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 EHMT2 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 H3F3A Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 H3F3B Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 HDAC2 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 KPNA6 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 L3MBTL2 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 LRIF1 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 MAX Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 MAD2L2 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 MGA Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 MIS12 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 NSL1 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 PCGF6 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 PMF1-BGLAP Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 PMF1 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 POGZ Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 PRR14 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 RBBP4 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 RING1 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 RNF2 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 RYBP Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 SCAI Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 SCGB2A1 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 SPRR1B Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 CCT3 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 TFDP1 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 TRIM28 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 WDR5 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 WIZ Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 YAF2 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 ZNF280C Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 ZNF280D Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 ZNF518A Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 ZNF518B Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 ZMYM4 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 ZNF292 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 ZNF462 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 ZNF581 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 ZNF644 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX1 HECW2 Affinity Capture-Western 30208514 9606 9606 BIOGRID
CBX1 BAHD1 Two-hybrid 32296183 9606 9606 BIOGRID
CBX1 ATXN7L2 Two-hybrid 32296183 9606 9606 BIOGRID
CBX1 MIS12 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX1 MGA Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX1 S100A9 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX1 ZNF581 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX1 SPRR2E Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX1 Suv39h1 Affinity Capture-Western 10202156 9606 10090 BIOGRID
 Annotation of CBX1
 TCGA cancer survival map of CBX1


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  CBX1