TcoF overview
TcoF: CBX2
GeneID: 9085
Name: Chromobox protein homolog 2
Ensembl: ENSG00000173894
Species: Human
Class: NA
Family: Chromobox
Disease: 4
Go term: 13
Pathway: 3
Hallmark: --
Super Enhancer:

chr17:77763701-77818975 chr17:77763765-77826024 chr17:77769519-77819856 chr17:77769634-77827094 chr17:77769822-77819819 chr17:77769438-77819891 chr17:77769937-77819655 chr17:77686374-77719006 chr17:77686556-77719902 chr17:77702106-77717929 chr17:77641720-77718829

Enhancer:

chr17:77752220-77753160 chr17:77770330-77770720 chr17:78075690-78077850 chr17:77752110-77752180 chr17:77809510-77811630 chr17:77811700-77812800 chr17:78143860-78145870 chr17:78186070-78187600 chr17:78359420-78360040 chr17:78360230-78360480 chr17:77770120-77770290 chr17:77895900-77896480 chr17:77924380-77924550 chr17:77905520-77906140 chr17:77812850-77812980 chr17:77494440-77495380 chr17:77916010-77917650 chr17:78272320-78273520 chr17:78289170-78290980 chr17:78324200-78325480 chr17:78351590-78353410 chr17:78360690-78361920 chr17:77898870-77899490 chr17:77769920-77770040 chr17:77881210-77883240 chr17:77922810-77923510 chr17:77923660-77924200 chr17:77753230-77755490 chr17:77809200-77809440 chr17:77705160-77707300 chr17:77895430-77895740 chr17:78199200-78199630 chr17:78213260-78215560 chr17:78353520-78354630 chr17:78355530-78356770 chr17:77541440-77543670 chr17:77897800-77898810 chr17:78019110-78020260 chr17:78161720-78162170 chr17:78179450-78180760 chr17:78227310-78229650 chr17:78340570-78341540 chr17:78341650-78341760 chr17:78341940-78343300 chr17:77711060-77711710 chr17:78060020-78061400 chr17:78165270-78166300 chr17:78169450-78171890 chr17:78171960-78172190 chr17:78265630-78266880 chr17:77766030-77768170 chr17:78001700-78002200 chr17:77969960-77972110 chr17:77920350-77921440 chr17:78043740-78045690 chr17:78078010-78078350 chr17:77769360-77769850 chr17:77804590-77806950 chr17:77875860-77876680 chr17:77893640-77895200 chr17:77933470-77935740 chr17:78037100-78039280 chr17:78082630-78083740 chr17:77839600-77841740 chr17:77871320-77873560 chr17:77787210-77789610 chr17:78097560-78099000 chr17:77921630-77922670 chr17:77826180-77827410 chr17:77835640-77837300 chr17:77838400-77839280 chr17:77948360-77949800 chr17:77950630-77951800 chr17:77952120-77954100 chr17:78027500-78028700 chr17:78164700-78165120 chr17:78169130-78169350 chr17:78184810-78185860 chr17:78253430-78255470 chr17:78263640-78264360 chr17:78394760-78395620 chr17:78396040-78397310 chr17:77954120-77956490 chr17:78133450-78135670 chr17:78216790-78218660 chr17:77966940-77968460 chr17:78102820-78103540 chr17:77782190-77783900 chr17:77711860-77713720

Promoter:

chr17:77751947-77761782

 ChIP-seq based regulatory details of CBX2
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
TcoF_00_30708 CBX2 cell line K-562 GSM1003567 Bone Marrow ChIP-Atlas
TcoF_00_40024 CBX2 cell line K-562 GSM1003567 Bone Marrow ReMap
TcoF_00_30538 CBX2 cell line K-562 GSM830986 Bone Marrow ChIP-Atlas
TcoF_00_30524 CBX2 cell line 293 GSM855014 Kidney ChIP-Atlas
TcoF_00_30526 CBX2 cell line 293 GSM855020 Kidney ChIP-Atlas
TcoF_00_40696 CBX2 cell line HEK293T GSM855020 Embryonic Kidney ReMap
 Downstream target genes of CBX2
 Protein-protein interaction of CBX2
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
CBX2 RING1 Reconstituted Complex 10369680 9606 9606 BIOGRID
CBX2 RNF2 Affinity Capture-MS 22325352 9606 9606 BIOGRID
CBX2 BMI1 Affinity Capture-MS 22325352 9606 9606 BIOGRID
CBX2 RING1 Affinity Capture-MS 22325352 9606 9606 BIOGRID
CBX2 PHC1 Affinity Capture-MS 22325352 9606 9606 BIOGRID
CBX2 PHC2 Affinity Capture-MS 22325352 9606 9606 BIOGRID
CBX2 PHC3 Affinity Capture-MS 22325352 9606 9606 BIOGRID
CBX2 CBX4 Affinity Capture-MS 22325352 9606 9606 BIOGRID
CBX2 SCML1 Affinity Capture-MS 22325352 9606 9606 BIOGRID
CBX2 MGA Affinity Capture-MS 22325352 9606 9606 BIOGRID
CBX2 MDFI Two-hybrid 19060904 9606 9606 BIOGRID
CBX2 ANKRD26 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX2 BMI1 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX2 CENPE Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX2 CSNK2A1 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX2 CSNK2A2 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX2 CSNK2B Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX2 DIS3L2 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX2 GTF2I Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX2 HIST1H2AB Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX2 HIST1H2BB Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX2 HIST4H4 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX2 DCAF6 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX2 KDM3A Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX2 TRANK1 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX2 MYCBP2 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX2 NPM1 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX2 PARP12 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX2 PARP1 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX2 PHC2 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX2 PSME3 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX2 RNF2 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX2 RNF213 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX2 CCDC158 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX2 ZKSCAN7 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX2 KRTAP2-4 Two-hybrid 25416956 9606 9606 BIOGRID
CBX2 DHX57 Two-hybrid 25416956 9606 9606 BIOGRID
CBX2 RBMY1F Two-hybrid 25416956 9606 9606 BIOGRID
CBX2 KRTAP10-7 Two-hybrid 25416956 9606 9606 BIOGRID
CBX2 KRTAP10-9 Two-hybrid 25416956 9606 9606 BIOGRID
CBX2 KRTAP10-1 Two-hybrid 25416956 9606 9606 BIOGRID
CBX2 KRTAP10-3 Two-hybrid 25416956 9606 9606 BIOGRID
CBX2 LMNB1 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX2 NUFIP2 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX2 SPATA7 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX2 ELP3 Negative Genetic 28481362 9606 9606 BIOGRID
CBX2 MCM2 Negative Genetic 28481362 9606 9606 BIOGRID
CBX2 GEMIN5 Negative Genetic 28481362 9606 9606 BIOGRID
CBX2 CENPA Positive Genetic 28481362 9606 9606 BIOGRID
CBX2 RTF1 Positive Genetic 28481362 9606 9606 BIOGRID
CBX2 PHC2 Reconstituted Complex 31093962 9606 9606 BIOGRID
CBX2 PCGF2 Reconstituted Complex 31093962 9606 9606 BIOGRID
CBX2 CYSRT1 Two-hybrid 32296183 9606 9606 BIOGRID
CBX2 KRTAP12-3 Two-hybrid 32296183 9606 9606 BIOGRID
CBX2 KRTAP12-2 Two-hybrid 32296183 9606 9606 BIOGRID
CBX2 RBMY1J Two-hybrid 32296183 9606 9606 BIOGRID
CBX2 SCMH1 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX2 PCGF2 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX2 CBX6 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX2 PHC1 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX2 CBX8 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX2 PHC3 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX2 BMI1 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX2 PCGF1 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX2 YAF2 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX2 RYBP Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX2 RNF2 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX2 PCGF3 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX2 PCGF5 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX2 PHC2 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX2 BCOR Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX2 KDM2B Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX2 BCORL1 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX2 PCGF6 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX2 RING1 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX2 SKP1 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX2 FBRS Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX2 CBX4 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX2 E2F6 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX2 SCML1 Affinity Capture-MS 24981860 9606 9606 BIOGRID
 Annotation of CBX2
 TCGA cancer survival map of CBX2


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  CBX2