TcoF overview
TcoF: CBX6
GeneID: 595
Name: Chromobox protein homolog 6
Ensembl: ENSG00000183741
Species: Human
Class: class HC
Family: Chromobox
Disease: 0
Go term: 7
Pathway: 1
Hallmark: --
Super Enhancer:

chr22:39258289-39280325 chr22:39258513-39280435 chr22:39258585-39280884 chr22:39248759-39270497

Enhancer:

chr22:39078100-39078320 chr22:39187720-39190070 chr22:39267760-39267900 chr22:39144790-39145770 chr22:39145860-39146220 chr22:39175620-39176930 chr22:39267950-39268120 chr22:38890140-38890630 chr22:39148670-39150640 chr22:39177020-39178660 chr22:38982200-38983220 chr22:39021020-39022180 chr22:39147380-39148510 chr22:39150710-39151270 chr22:39267550-39267690 chr22:39378480-39380070 chr22:39388780-39388940 chr22:39389010-39389950 chr22:39410380-39411590 chr22:39417540-39418820 chr22:39436980-39438940 chr22:39439100-39440080 chr22:39473380-39474930 chr22:39928530-39928690 chr22:38944640-38945920 chr22:39104960-39107210 chr22:39445590-39448070 chr22:39475090-39476930 chr22:39496430-39497240 chr22:39117870-39118790 chr22:39078450-39078880 chr22:39227160-39227690 chr22:39235040-39237350 chr22:39238620-39239230 chr22:39543310-39545790 chr22:38899590-38901950 chr22:39112090-39112650 chr22:39129590-39130710 chr22:39146390-39146900 chr22:39147040-39147210 chr22:39132390-39134170 chr22:39726730-39729150 chr22:39629530-39631780 chr22:39739100-39740950 chr22:39925920-39928390 chr22:39917680-39917770 chr22:39925630-39925820 chr22:39459500-39460920 chr22:39461630-39463530 chr22:39509290-39511640 chr22:39661630-39663630 chr22:39506370-39507790 chr22:38984160-38985630 chr22:39017380-39018930 chr22:39039260-39041560 chr22:39135430-39135720 chr22:39427980-39428200 chr22:39448360-39448580 chr22:39625170-39626080 chr22:39626230-39627620 chr22:39709320-39709630 chr22:39030480-39032450 chr22:39134270-39134590 chr22:39134760-39134870 chr22:39134990-39135340 chr22:39135950-39136270 chr22:39136440-39137010 chr22:38609900-38610420 chr22:38612860-38615290 chr22:38638170-38640480 chr22:38652560-38654410 chr22:38710740-38713160 chr22:38792050-38794440 chr22:38886600-38887220 chr22:39001350-39003390 chr22:39178880-39180490 chr22:39574020-39574650 chr22:39601110-39602120 chr22:39783630-39786060 chr22:39800460-39802580 chr22:39869850-39871810 chr22:39898440-39900200 chr22:39918690-39919920 chr22:38730560-38732610 chr22:38628750-38629740 chr22:38630240-38630500 chr22:38630550-38630890 chr22:38685100-38686690 chr22:39024550-39024770 chr22:39125090-39125460 chr22:39900540-39902420 chr22:38631780-38633910 chr22:39143000-39144710 chr22:39634610-39636850 chr22:39795840-39798310 chr22:39034830-39035130 chr22:39070850-39072480 chr22:39380240-39381810 chr22:38286250-38288520 chr22:38513060-38513690 chr22:38516090-38516760 chr22:38864330-38866120 chr22:38868120-38870520 chr22:38873460-38874300 chr22:38877640-38878500 chr22:38897900-38898400 chr22:38927110-38928940 chr22:38626750-38627240 chr22:38642110-38642790 chr22:38746600-38747710 chr22:38849110-38850980 chr22:39110510-39111910 chr22:39181130-39183200 chr22:39677220-39678190 chr22:39692520-39695020 chr22:39695030-39697160 chr22:39760300-39761800 chr22:39809410-39811010 chr22:39811150-39811500 chr22:39828670-39828820 chr22:39828870-39829340 chr22:38748000-38750350 chr22:39108160-39110360 chr22:38962740-38963580 chr22:38811000-38812610 chr22:39441230-39441430 chr22:39441550-39442040

Promoter:

chr22:39257427-39268254

 ChIP-seq based regulatory details of CBX6
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
TcoF_00_20176 CBX6 tissue None GSM1295076 Mammary Gland Cistrome
TcoF_00_20246 CBX6 tissue None GSM1295087 Foreskin Cistrome
 Downstream target genes of CBX6
 Protein-protein interaction of CBX6
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
CBX6 RNF2 Affinity Capture-MS 22325352 9606 9606 BIOGRID
CBX6 BMI1 Affinity Capture-MS 22325352 9606 9606 BIOGRID
CBX6 RING1 Affinity Capture-MS 22325352 9606 9606 BIOGRID
CBX6 PHC1 Affinity Capture-MS 22325352 9606 9606 BIOGRID
CBX6 PHC2 Affinity Capture-MS 22325352 9606 9606 BIOGRID
CBX6 PHC3 Affinity Capture-MS 22325352 9606 9606 BIOGRID
CBX6 CBX4 Affinity Capture-MS 22325352 9606 9606 BIOGRID
CBX6 AHDC1 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 BPTF Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 CHAF1B Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 CEP350 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 CEP135 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 DACT1 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 DNMT1 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 ELP4 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 HIST1H1A Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 HIST1H1B Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 HIST1H2AB Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 HIST2H2BE Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 HIST3H3 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 IGF2BP1 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 IGF2BP2 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 IGF2BP3 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 ILF2 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 FOXK2 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 KHDRBS1 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 KRI1 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 SSB Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 LAS1L Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 MOV10 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 NCOR2 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 NCL Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 NUMA1 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 PAIP1 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 PHC2 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 RAD17 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 ERCC6 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 RGAG1 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 RING1 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 RNF2 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 ULK2 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 YBX1 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 TOPAZ1 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 ZMYM4 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 ZNF33A Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 BMI1 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 RNF213 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 CCDC158 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 ZKSCAN7 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX6 RING1 Affinity Capture-Western 21282530 9606 9606 BIOGRID
CBX6 RNF2 Affinity Capture-Western 21282530 9606 9606 BIOGRID
CBX6 BMI1 Affinity Capture-Western 21282530 9606 9606 BIOGRID
CBX6 PCGF3 Affinity Capture-Western 21282530 9606 9606 BIOGRID
CBX6 PCGF1 Reconstituted Complex 21282530 9606 9606 BIOGRID
CBX6 PCGF2 Reconstituted Complex 21282530 9606 9606 BIOGRID
CBX6 PCGF3 Reconstituted Complex 21282530 9606 9606 BIOGRID
CBX6 BMI1 Reconstituted Complex 21282530 9606 9606 BIOGRID
CBX6 PCGF5 Reconstituted Complex 21282530 9606 9606 BIOGRID
CBX6 PCGF6 Reconstituted Complex 21282530 9606 9606 BIOGRID
CBX6 RING1 Reconstituted Complex 21282530 9606 9606 BIOGRID
CBX6 RNF2 Reconstituted Complex 21282530 9606 9606 BIOGRID
CBX6 DCAF7 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX6 NUFIP2 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX6 COMMD3-BMI1 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX6 BMI1 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX6 PHC1 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX6 PHC2 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX6 PHC3 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX6 RING1 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX6 RNF2 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX6 RPL10 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX6 RPS3 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX6 SCML1 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX6 TUBA1C Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX6 TIMM50 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX6 RAB34 Proximity Label-MS 30021884 9606 9606 BIOGRID
CBX6 RPL36 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX6 PHC3 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX6 RNF2 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX6 RPL7A Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX6 PCGF3 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX6 BCOR Affinity Capture-MS 24981860 9606 9606 BIOGRID
 Annotation of CBX6
 TCGA cancer survival map of CBX6


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  CBX6