TcoF overview
TcoF: CBX7
GeneID: 902
Name: Chromobox homolog 7, isoform CRA_b
Ensembl: ENSG00000100307
Species: Human
Class: class HC
Family: Chromobox
Disease: 1
Go term: 8
Pathway: --
Hallmark: --
Super Enhancer:

chr22:39568746-39581884 chr22:39566764-39574442 chr22:39566922-39582173 chr22:39568935-39574263 chr22:39566940-39582377 chr22:39568849-39582406 chr22:39568832-39576079 chr22:39569456-39576343 chr22:39568258-39581855 chr22:39566728-39577109 chr22:39565774-39581801 chr22:39565697-39576362 chr22:39565646-39576387 chr22:39566993-39577975 chr22:39565879-39576306 chr22:39597968-39653072 chr22:39566496-39582572 chr22:39567206-39576286 chr22:39566851-39575889 chr22:39566943-39573730 chr22:39566754-39574344 chr22:39566890-39575208 chr22:39567644-39581737 chr22:39566885-39582080 chr22:39570033-39572876 chr22:39569700-39572962 chr22:39568231-39582092 chr22:39567129-39581794 chr22:39567028-39581784 chr22:39565554-39582313 chr22:39565328-39577307 chr22:39564624-39579449 chr22:39567002-39582688 chr22:39566088-39581965 chr22:39571174-39580801 chr22:39566584-39582564 chr22:39569322-39572420 chr22:39567285-39573768 chr22:39565996-39576188 chr22:39566956-39581839 chr22:39527451-39549785 chr22:39539790-39549800 chr22:39539820-39549810 chr22:39526950-39549719 chr22:39525964-39550034 chr22:39539485-39549915 chr22:39526900-39550470 chr22:39526617-39550021 chr22:39539740-39550044 chr22:39539791-39549964 chr22:39535930-39549606 chr22:39526951-39549998 chr22:39506509-39545035 chr22:39524660-39545764 chr22:39541074-39549759

Enhancer:

chr22:39144790-39145770 chr22:39145860-39146220 chr22:39147380-39148510 chr22:39148670-39150640 chr22:39150710-39151270 chr22:39177020-39178660 chr22:39267550-39267690 chr22:39267760-39267900 chr22:39267950-39268120 chr22:39378480-39380070 chr22:39388780-39388940 chr22:39389010-39389950 chr22:39410380-39411590 chr22:39417540-39418820 chr22:39436980-39438940 chr22:39439100-39440080 chr22:39473380-39474930 chr22:40043930-40045500 chr22:39353730-39355540 chr22:38984160-38985630 chr22:39078100-39078320 chr22:39104960-39107210 chr22:39380240-39381810 chr22:39445590-39448070 chr22:39475090-39476930 chr22:39496430-39497240 chr22:39388160-39388400 chr22:39117870-39118790 chr22:39543310-39545790 chr22:39751940-39753470 chr22:39811150-39811500 chr22:39829920-39830120 chr22:39853560-39855070 chr22:39867510-39868520 chr22:39869850-39871810 chr22:39898440-39900200 chr22:39925630-39925820 chr22:39972120-39972990 chr22:39861870-39863940 chr22:39925920-39928390 chr22:39629530-39631780 chr22:39187720-39190070 chr22:39760300-39761800 chr22:39928530-39928690 chr22:39129590-39130710 chr22:39382100-39382300 chr22:39078450-39078880 chr22:39147040-39147210 chr22:39421010-39421070 chr22:39459500-39460920 chr22:39461630-39463530 chr22:39509290-39511640 chr22:39918690-39919920 chr22:39506370-39507790 chr22:39726730-39729150 chr22:39427980-39428200 chr22:39709320-39709630 chr22:39178880-39180490 chr22:39783630-39786060 chr22:39800460-39802580 chr22:39970020-39971930 chr22:39900540-39902420 chr22:39987980-39990450 chr22:39143000-39144710 chr22:39235040-39237350 chr22:39238620-39239230 chr22:39634610-39636850 chr22:39795840-39798310 chr22:39695030-39697160 chr22:39709740-39709820 chr22:39917680-39917770 chr22:40169190-40171090 chr22:39627830-39629430 chr22:39181130-39183200 chr22:39809410-39811010 chr22:39828670-39828820 chr22:39828870-39829340 chr22:40113870-40114870 chr22:39519290-39521670 chr22:39708990-39709190 chr22:39812880-39813270 chr22:39125090-39125460 chr22:39134990-39135340 chr22:39135430-39135720 chr22:39135950-39136270 chr22:39136440-39137010 chr22:39146390-39146900 chr22:39411760-39412080 chr22:39421360-39421560 chr22:39422320-39422680 chr22:39441230-39441430 chr22:39441550-39442040 chr22:39905410-39906120 chr22:39909330-39909520

Promoter:

chr22:39516172-39548685

 ChIP-seq based regulatory details of CBX7
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
TcoF_00_20177 CBX7 tissue None GSM1295077 Mammary Gland Cistrome
TcoF_00_20247 CBX7 tissue None GSM1295088 Foreskin Cistrome
TcoF_00_20251 CBX7 tissue None GSM1295097 Foreskin Cistrome
 Downstream target genes of CBX7
 Protein-protein interaction of CBX7
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
CBX7 RING1 Reconstituted Complex 14647293 9606 9606 BIOGRID
CBX7 RING1 Affinity Capture-Western 14647293 9606 9606 BIOGRID
CBX7 HDAC2 Affinity Capture-MS 19706751 9606 9606 BIOGRID
CBX7 HDAC2 Affinity Capture-Western 19706751 9606 9606 BIOGRID
CBX7 HDAC2 Reconstituted Complex 19706751 9606 9606 BIOGRID
CBX7 HDAC2 Biochemical Activity 19706751 9606 9606 BIOGRID
CBX7 RING1 Affinity Capture-MS 19636380 9606 9606 BIOGRID
CBX7 PCGF6 Affinity Capture-MS 19636380 9606 9606 BIOGRID
CBX7 BMI1 Affinity Capture-MS 19636380 9606 9606 BIOGRID
CBX7 PHC2 Affinity Capture-MS 19636380 9606 9606 BIOGRID
CBX7 RNF2 Affinity Capture-MS 19636380 9606 9606 BIOGRID
CBX7 PCGF2 Affinity Capture-Western 19636380 9606 9606 BIOGRID
CBX7 BMI1 Affinity Capture-Western 19636380 9606 9606 BIOGRID
CBX7 HIST1H3A Affinity Capture-Western 16537902 9606 9606 BIOGRID
CBX7 HIST1H4A Affinity Capture-Western 16537902 9606 9606 BIOGRID
CBX7 SUV39H2 PCA 21060834 9606 9606 BIOGRID
CBX7 HMGA1 Affinity Capture-Western 22214847 9606 9606 BIOGRID
CBX7 HMGA1 Co-localization 22214847 9606 9606 BIOGRID
CBX7 HDAC2 Co-localization 22214847 9606 9606 BIOGRID
CBX7 BMI1 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX7 CSNK2A1 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX7 CSNK2B Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX7 PCGF2 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX7 PCGF6 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX7 PHC2 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX7 RAD17 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX7 RING1 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX7 RNF2 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX7 CDC42SE1 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX7 SRBD1 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX7 TPR Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX7 UBE4A Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX7 UCHL5 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX7 DCAF7 Affinity Capture-MS 21282530 9606 9606 BIOGRID
CBX7 RING1 Affinity Capture-Western 21282530 9606 9606 BIOGRID
CBX7 RNF2 Affinity Capture-Western 21282530 9606 9606 BIOGRID
CBX7 BMI1 Affinity Capture-Western 21282530 9606 9606 BIOGRID
CBX7 PCGF3 Affinity Capture-Western 21282530 9606 9606 BIOGRID
CBX7 PCGF1 Reconstituted Complex 21282530 9606 9606 BIOGRID
CBX7 PCGF2 Reconstituted Complex 21282530 9606 9606 BIOGRID
CBX7 PCGF3 Reconstituted Complex 21282530 9606 9606 BIOGRID
CBX7 BMI1 Reconstituted Complex 21282530 9606 9606 BIOGRID
CBX7 PCGF5 Reconstituted Complex 21282530 9606 9606 BIOGRID
CBX7 PCGF6 Reconstituted Complex 21282530 9606 9606 BIOGRID
CBX7 RING1 Reconstituted Complex 21282530 9606 9606 BIOGRID
CBX7 RNF2 Reconstituted Complex 21282530 9606 9606 BIOGRID
CBX7 PHC3 Affinity Capture-MS 26186194 9606 9606 BIOGRID
CBX7 PHC2 Affinity Capture-MS 26186194 9606 9606 BIOGRID
CBX7 USP20 Affinity Capture-MS 26186194 9606 9606 BIOGRID
CBX7 BCOR Affinity Capture-MS 26186194 9606 9606 BIOGRID
CBX7 CSNK2B Affinity Capture-MS 26186194 9606 9606 BIOGRID
CBX7 RNF2 Affinity Capture-MS 26186194 9606 9606 BIOGRID
CBX7 PCGF1 Affinity Capture-MS 26186194 9606 9606 BIOGRID
CBX7 PCGF6 Affinity Capture-MS 26186194 9606 9606 BIOGRID
CBX7 BMI1 Affinity Capture-MS 26186194 9606 9606 BIOGRID
CBX7 PCGF3 Affinity Capture-MS 26186194 9606 9606 BIOGRID
CBX7 USP20 Affinity Capture-MS 28514442 9606 9606 BIOGRID
CBX7 PHC3 Affinity Capture-MS 28514442 9606 9606 BIOGRID
CBX7 PCGF1 Affinity Capture-MS 28514442 9606 9606 BIOGRID
CBX7 BMI1 Affinity Capture-MS 28514442 9606 9606 BIOGRID
CBX7 PHC2 Affinity Capture-MS 28514442 9606 9606 BIOGRID
CBX7 PCGF6 Affinity Capture-MS 28514442 9606 9606 BIOGRID
CBX7 PCGF3 Affinity Capture-MS 28514442 9606 9606 BIOGRID
CBX7 RNF2 Affinity Capture-MS 28514442 9606 9606 BIOGRID
CBX7 BCOR Affinity Capture-MS 28514442 9606 9606 BIOGRID
CBX7 NUFIP2 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX7 PCGF2 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX7 COMMD3-BMI1 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX7 BMI1 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX7 PCGF6 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX7 PHC1 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX7 PHC2 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX7 PHC3 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX7 RING1 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX7 RNF2 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX7 TUBA1C Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX7 TIMM50 Affinity Capture-MS 27705803 9606 9606 BIOGRID
CBX7 RNF2 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX7 BMI1 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX7 PHC2 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX7 PHC1 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX7 PHC3 Affinity Capture-MS 24981860 9606 9606 BIOGRID
CBX7 DCD Affinity Capture-MS 24981860 9606 9606 BIOGRID
 Annotation of CBX7
 TCGA cancer survival map of CBX7


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  CBX7