TcoF overview
TcoF: CDKN1C
GeneID: 51142
Name: Cyclin-dependent kinase inhibitor 1C
Ensembl: ENSG00000129757
Species: Human
Class: class HC
Family: Cyclin
Disease: 25
Go term: 15
Pathway: 4
Hallmark: 1
Super Enhancer:

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Enhancer:

chr11:2923600-2923810 chr11:2923940-2924440 chr11:2949900-2950120 chr11:2905360-2905890 chr11:2905150-2905220 chr11:3121490-3122830 chr11:3111930-3113660 chr11:3076240-3078570 chr11:2892100-2893070 chr11:3115560-3117850 chr11:3062260-3063390 chr11:2290360-2290960 chr11:2308200-2309970 chr11:2798260-2799200 chr11:2846220-2848480 chr11:3109570-3111070 chr11:3114280-3114750 chr11:2944220-2946230 chr11:3100730-3103000 chr11:3122930-3123410 chr11:3123510-3124460 chr11:3124550-3125420 chr11:3147790-3150240 chr11:3421510-3422980 chr11:3423100-3423840 chr11:2790150-2791820 chr11:2793560-2794420 chr11:2837840-2839040 chr11:2960800-2963250 chr11:2966880-2968760 chr11:2972550-2973000 chr11:2973030-2974810 chr11:3031780-3032660 chr11:3163610-3166070 chr11:3170470-3171470 chr11:3171580-3172780 chr11:3173750-3176120 chr11:3222140-3224640 chr11:3251980-3253370 chr11:3394910-3397190 chr11:2947550-2949500 chr11:2964700-2965650 chr11:3063490-3065700 chr11:2992480-2992670 chr11:3003420-3004170 chr11:2549250-2551250 chr11:2587380-2587990 chr11:2598890-2599270 chr11:2799270-2801560 chr11:2809180-2810960 chr11:2812500-2813980 chr11:2880540-2882920 chr11:2940640-2942160 chr11:3008070-3008310 chr11:3008370-3008830 chr11:3136530-3137240 chr11:2570690-2572750 chr11:2620810-2621560 chr11:2792070-2792680 chr11:2797280-2797500 chr11:3023830-3026080 chr11:3107180-3108340 chr11:3126190-3126910 chr11:3022480-3023190 chr11:3027770-3028100 chr11:3028190-3029640 chr11:3029870-3030440 chr11:3031160-3031330 chr11:3114890-3114960 chr11:3115070-3115460 chr11:2867170-2868270 chr11:2970490-2972480 chr11:2802450-2803500 chr11:3074470-3075720

Promoter:

chr11:2904443-2907003

 ChIP-seq based regulatory details of CDKN1C
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
 Downstream target genes of CDKN1C
 Protein-protein interaction of CDKN1C
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
CDKN1C LIMK1 Two-hybrid 14530263 9606 9606 BIOGRID
CDKN1C LIMK1 Affinity Capture-Western 14530263 9606 9606 BIOGRID
CDKN1C SKP2 Affinity Capture-Western 12925736 9606 9606 BIOGRID
CDKN1C PCNA Two-hybrid 9465025 9606 9606 BIOGRID
CDKN1C PCNA Affinity Capture-Western 9465025 9606 9606 BIOGRID
CDKN1C PCNA Reconstituted Complex 9465025 9606 9606 BIOGRID
CDKN1C MYOD1 Affinity Capture-Western 10764802 9606 9606 BIOGRID
CDKN1C MYOD1 Reconstituted Complex 10764802 9606 9606 BIOGRID
CDKN1C CCND1 Reconstituted Complex 10764802 9606 9606 BIOGRID
CDKN1C CCNE2 Two-hybrid 9840943 9606 9606 BIOGRID
CDKN1C AKT1 Affinity Capture-Western 23421998 9606 9606 BIOGRID
CDKN1C COPS5 Affinity Capture-Western 26606000 9606 9606 BIOGRID
CDKN1C CCND1 Reconstituted Complex 10713702 9606 9606 BIOGRID
CDKN1C CDKN1C Reconstituted Complex 10713702 9606 9606 BIOGRID
CDKN1C CDKN1C Affinity Capture-Western 10713702 9606 9606 BIOGRID
CDKN1C CDK4 Reconstituted Complex 10713702 9606 9606 BIOGRID
CDKN1C CDK4 Affinity Capture-Western 10713702 9606 9606 BIOGRID
CDKN1C CCND1 Affinity Capture-Western 10713702 9606 9606 BIOGRID
CDKN1C ASCL1 Affinity Capture-Western 19590511 9606 9606 BIOGRID
CDKN1C NEUROD6 Affinity Capture-Western 19590511 9606 9606 BIOGRID
CDKN1C NEUROD1 Affinity Capture-Western 19590511 9606 9606 BIOGRID
CDKN1C CDK7 Affinity Capture-Western 20106982 9606 9606 BIOGRID
CDKN1C CDK9 Affinity Capture-Western 20106982 9606 9606 BIOGRID
CDKN1C POLR2A Affinity Capture-Western 20106982 9606 9606 BIOGRID
CDKN1C E2F1 Co-localization 20106982 9606 9606 BIOGRID
CDKN1C E2F3 Co-localization 20106982 9606 9606 BIOGRID
CDKN1C CDKN2A Co-localization 20106982 9606 9606 BIOGRID
CDKN1C E2F1 Affinity Capture-Western 20106982 9606 9606 BIOGRID
CDKN1C VHL Two-hybrid 28425505 9606 9606 BIOGRID
 Annotation of CDKN1C
 TCGA cancer survival map of CDKN1C


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  CDKN1C