TcoF overview
| TcoF: | CTR9 | |
| GeneID: | 55827 | |
| Name: | RNA polymerase-associated protein CTR9 homolog | |
| Ensembl: | ENSG00000198730 | |
| Species: | Human | |
| Class: | class HC | |
| Family: | Others | |
| Disease: | 0 | |
| Go term: | 31 | |
| Pathway: | 1 | |
| Hallmark: | -- | |
| Super Enhancer: |
chr11:10662824-10733263 chr11:10663464-10732795 chr11:10741109-10774778 chr11:10737479-10775409 chr11:10736542-10758566 chr11:10741743-10758515 |
|
| Enhancer: |
chr11:10773000-10774210 chr11:10792180-10793090 chr11:10884620-10886800 chr11:10613160-10615030 chr11:10626090-10628280 chr11:10523140-10524260 chr11:10524440-10526090 chr11:10602140-10603410 chr11:10622610-10624660 chr11:10645400-10647510 chr11:10610700-10613090 chr11:10783600-10784970 chr11:10516580-10517110 chr11:10518780-10519200 chr11:10519610-10520690 chr11:10521050-10521630 chr11:10521800-10522360 chr11:10624800-10625950 chr11:10621480-10622460 chr11:10557180-10557780 chr11:10369760-10371670 chr11:10781870-10783490 chr11:10130200-10132630 chr11:10138880-10141100 chr11:10255110-10255940 chr11:10285000-10286170 chr11:10313280-10315560 chr11:10330220-10332650 chr11:10341200-10342230 chr11:10392650-10393290 chr11:10394110-10395870 chr11:10400570-10401910 chr11:10404100-10404390 chr11:10406180-10407950 chr11:10408310-10410540 chr11:10410910-10412850 chr11:10417050-10417460 chr11:10529130-10529430 chr11:10607670-10609270 chr11:10628310-10630760 chr11:10638280-10639890 chr11:10690160-10692390 chr11:10713680-10715000 chr11:10797820-10800220 chr11:10838820-10841130 chr11:10888100-10889120 chr11:10912450-10914630 chr11:10914740-10917220 chr11:10920350-10922830 chr11:10923870-10924200 chr11:10946390-10947730 chr11:10948730-10949650 chr11:11048530-11050380 chr11:11369950-11370470 chr11:11370870-11373110 chr11:11412900-11414220 chr11:11414460-11414780 chr11:11429960-11432020 chr11:10419090-10421280 chr11:10865660-10866220 chr11:10941370-10942120 chr11:10538990-10540580 chr11:10778390-10779300 chr11:10816180-10818590 chr11:10862710-10863570 chr11:10864020-10865560 chr11:10905270-10905470 chr11:10905740-10906400 chr11:10917840-10918560 chr11:10504750-10506360 chr11:10580840-10581360 chr11:10581440-10582040 chr11:10582850-10584570 chr11:10779530-10781710 chr11:10144150-10144840 chr11:10540690-10542420 chr11:10543770-10544280 chr11:10545250-10546730 chr11:10610450-10610550 chr11:10869520-10870680 chr11:11155620-11156890 chr11:11200030-11201460 chr11:11232690-11234290 chr11:11242460-11242680 chr11:11252190-11253060 chr11:11334540-11336570 chr11:11349870-11351890 chr11:11351930-11352830 chr11:11433040-11433660 chr11:11157100-11159130 chr11:10526930-10527160 chr11:10227210-10227860 chr11:10449520-10451920 chr11:10805580-10807020 chr11:11022380-11022990 chr11:10598960-10600840 chr11:10517320-10518350 chr11:10441350-10442580 chr11:10457490-10458440 chr11:10458670-10460020 chr11:10789710-10789880 chr11:10790040-10791560 chr11:11041320-11042720 |
|
| Promoter: |
chr11:10772793-10823172 |
ChIP-seq based regulatory details of CTR9
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|---|---|---|---|---|---|
| TcoF_00_30339 | CTR9 | cell line | THP-1 | GSM1520910 | Blood | ChIP-Atlas |
Downstream target genes of CTR9
Upstream regulatory details of CTR9
Protein-protein interaction of CTR9
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| CTR9 | STAT3 | Affinity Capture-Western | 17911113 | 9606 | 9606 | BIOGRID |
| CTR9 | CDC73 | Affinity Capture-Western | 18469135 | 9606 | 9606 | BIOGRID |
| CTR9 | RTF1 | Affinity Capture-MS | 18469135 | 9606 | 9606 | BIOGRID |
| CTR9 | PAF1 | Affinity Capture-MS | 18469135 | 9606 | 9606 | BIOGRID |
| CTR9 | CDC73 | Affinity Capture-MS | 18469135 | 9606 | 9606 | BIOGRID |
| CTR9 | LEO1 | Affinity Capture-MS | 18469135 | 9606 | 9606 | BIOGRID |
| CTR9 | LEO1 | Affinity Capture-Western | 20178742 | 9606 | 9606 | BIOGRID |
| CTR9 | CDC73 | Affinity Capture-Western | 20178742 | 9606 | 9606 | BIOGRID |
| CTR9 | RTF1 | Affinity Capture-Western | 20178742 | 9606 | 9606 | BIOGRID |
| CTR9 | WDR61 | Affinity Capture-Western | 20178742 | 9606 | 9606 | BIOGRID |
| CTR9 | PAF1 | Affinity Capture-Western | 20178742 | 9606 | 9606 | BIOGRID |
| CTR9 | CDC73 | Affinity Capture-MS | 20305087 | 9606 | 9606 | BIOGRID |
| CTR9 | LEO1 | Affinity Capture-MS | 20305087 | 9606 | 9606 | BIOGRID |
| CTR9 | PAF1 | Affinity Capture-MS | 20305087 | 9606 | 9606 | BIOGRID |
| CTR9 | WDR61 | Affinity Capture-MS | 20305087 | 9606 | 9606 | BIOGRID |
| CTR9 | LEO1 | Affinity Capture-MS | 22532828 | 9606 | 9606 | BIOGRID |
| CTR9 | CDC73 | Affinity Capture-MS | 22532828 | 9606 | 9606 | BIOGRID |
| CTR9 | LEO1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| CTR9 | PAF1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| CTR9 | RTF1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| CTR9 | SUPT16H | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| CTR9 | SSRP1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| CTR9 | RPL12 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| CTR9 | CDC73 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| CTR9 | COG3 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| CTR9 | RABL6 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| CTR9 | CDC73 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| CTR9 | CHD1 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| CTR9 | CHD2 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| CTR9 | ADRBK1 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | ALDH3B1 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | CCNT1 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | CDK9 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | CETN2 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | FN1 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | G6PD | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | FOXK2 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | NFIC | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | PMS2 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | POLR2A | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | POLR2B | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | POLR2C | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | POLR2D | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | POLR2G | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | PPP1R10 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | PPP2R5D | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | SHMT2 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | SUPT5H | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | SUPT6H | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | TCEB1 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | TCEB2 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | TCEB3 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | VEZF1 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | ELL | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | AKR7A2 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | EIF4G3 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | NFS1 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | TOX4 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | ATP9A | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | RPP38 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | TACC2 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | PRSS23 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | ELL2 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | RPRD2 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | FKBP15 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | TMEM131 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | PRPF31 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | AFF4 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | TAOK3 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | DGCR8 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | PAF1 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | IWS1 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | FGD6 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | ACSS2 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | ERGIC1 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | ANO3 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | MAPKAP1 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | CDC73 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | WDR61 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | ZFP91 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | NDEL1 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | KLF16 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | FAM161A | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | ING5 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | TJAP1 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | LEO1 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | ACTBL2 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| CTR9 | MYC | Affinity Capture-Western | 26687678 | 9606 | 9606 | BIOGRID |
| CTR9 | AGO2 | Affinity Capture-Western | 26902284 | 9606 | 9606 | BIOGRID |
| CTR9 | POLR2A | Affinity Capture-Western | 26902284 | 9606 | 9606 | BIOGRID |
| CTR9 | PAF1 | Affinity Capture-Western | 26902284 | 9606 | 9606 | BIOGRID |
| CTR9 | PAF1 | Reconstituted Complex | 30228257 | 9606 | 9606 | BIOGRID |
| CTR9 | PAF1 | Co-crystal Structure | 30228257 | 9606 | 9606 | BIOGRID |
| CTR9 | MED15 | Negative Genetic | 28481362 | 9606 | 9606 | BIOGRID |
| CTR9 | KMT2A | Positive Genetic | 28481362 | 9606 | 9606 | BIOGRID |
| CTR9 | PAF1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| CTR9 | CDC73 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| CTR9 | WDR61 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| CTR9 | TCEB1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| CTR9 | TCEB2 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| CTR9 | ACACA | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
Annotation of CTR9
TCGA cancer survival map of CTR9
Expression of CTR9
Disease information of CTR9