TcoF overview
| TcoF: | DDX1 | |
| GeneID: | 3337 | |
| Name: | ATP-dependent RNA helicase DDX1 | |
| Ensembl: | ENSG00000079785 | |
| Species: | Human | |
| Class: | NA | |
| Family: | RNA helicase | |
| Disease: | 14 | |
| Go term: | 36 | |
| Pathway: | 4 | |
| Hallmark: | 1 | |
| Super Enhancer: |
chr2:15693822-15703829 chr2:15691532-15703370 chr2:15779459-15879067 chr2:15682734-15706942 chr2:15699183-15703396 chr2:15693662-15703608 chr2:15731068-15752057 chr2:15728362-15755812 chr2:15869808-15886820 chr2:15808166-15816715 chr2:15869668-15926619 chr2:15870000-15941912 chr2:15870365-15941994 chr2:15867548-15888719 chr2:15808317-15849733 chr2:15867245-15873780 |
|
| Enhancer: |
chr2:15556060-15556710 chr2:15637270-15637900 chr2:15698820-15701310 chr2:15417940-15420020 chr2:15440180-15442290 chr2:16127240-16128230 chr2:15770790-15770890 chr2:16143960-16144690 chr2:15438440-15439530 chr2:15679480-15681520 chr2:15316220-15318180 chr2:15641890-15643430 chr2:15672900-15674660 chr2:15747440-15749090 chr2:15768960-15769720 chr2:15363640-15365140 chr2:15499770-15501030 chr2:15638650-15639170 chr2:15589390-15590690 chr2:15950150-15952250 chr2:15521720-15522530 chr2:15634270-15636150 chr2:15639750-15641280 chr2:15667660-15669490 chr2:15749240-15750380 chr2:15760520-15761180 chr2:15843510-15845850 chr2:15848090-15850590 chr2:15670800-15672480 chr2:15682840-15684190 chr2:15696940-15698700 chr2:15281440-15283740 chr2:15478120-15478350 chr2:15774730-15776160 chr2:15766190-15766910 chr2:15779690-15781560 chr2:15494820-15496100 chr2:16081220-16081650 chr2:16119200-16121580 chr2:16129600-16130440 chr2:16131300-16132320 chr2:15399220-15401420 chr2:16121630-16123560 chr2:16123700-16125950 |
|
| Promoter: |
chr2:15731302-15771235 |
ChIP-seq based regulatory details of DDX1
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|
Downstream target genes of DDX1
Upstream regulatory details of DDX1
Protein-protein interaction of DDX1
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| DDX1 | CSTF2 | Affinity Capture-Western | 11598190 | 9606 | 9606 | BIOGRID |
| DDX1 | HNRNPK | Reconstituted Complex | 12183465 | 9606 | 9606 | BIOGRID |
| DDX1 | ATM | Affinity Capture-Western | 18710941 | 9606 | 9606 | BIOGRID |
| DDX1 | MRE11A | Affinity Capture-Western | 18710941 | 9606 | 9606 | BIOGRID |
| DDX1 | RAD50 | Affinity Capture-Western | 18710941 | 9606 | 9606 | BIOGRID |
| DDX1 | NBN | Affinity Capture-Western | 18710941 | 9606 | 9606 | BIOGRID |
| DDX1 | APP | Reconstituted Complex | 21832049 | 9606 | 9606 | BIOGRID |
| DDX1 | HNRNPM | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | PPP1CA | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | EEF1A1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | HNRNPA1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | FAM98B | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | RNF168 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | RANBP9 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | GEMIN5 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | STRN | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | TMED9 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | HMCN1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | PLOD3 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | SCARB2 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | XPO1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | FGFR1OP2 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | SAP30BP | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | EIF2S1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | MCCC1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | RPA2 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | UBE2I | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | ALDH18A1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | TPR | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | VASP | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | HEXIM1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | KATNAL2 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | STRIP1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | POP1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | HAS1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | HNRNPD | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | PLOD1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | LSM14A | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | RBM4 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | RC3H1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | RHOA | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | NUP133 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | HSPA1A | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| DDX1 | NME7 | Two-hybrid | 21988832 | 9606 | 9606 | BIOGRID |
| DDX1 | ABCF1 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| DDX1 | C14orf166 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| DDX1 | RTCB | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| DDX1 | NELFB | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| DDX1 | YBX3 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| DDX1 | EIF3K | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| DDX1 | HNRNPA2B1 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| DDX1 | HNRNPM | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| DDX1 | HNRNPU | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| DDX1 | IGF2BP3 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| DDX1 | ILF2 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| DDX1 | KRT18 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| DDX1 | MRE11A | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| DDX1 | NMT1 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| DDX1 | PDCD6 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| DDX1 | POLR1C | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| DDX1 | QARS | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| DDX1 | RFC2 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| DDX1 | RFC4 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| DDX1 | RPL26L1 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| DDX1 | RPL27 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| DDX1 | YBX1 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| DDX1 | C14orf166 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| DDX1 | EEF1A1 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| DDX1 | EIF4EBP1 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| DDX1 | FAM98A | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| DDX1 | FAM98B | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| DDX1 | PICALM | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| DDX1 | RAVER1 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| DDX1 | RTCB | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| DDX1 | THUMPD1 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| DDX1 | TSTA3 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| DDX1 | HDAC1 | Affinity Capture-MS | 27173435 | 9606 | 9606 | BIOGRID |
| DDX1 | XYLT2 | Affinity Capture-MS | 27173435 | 9606 | 9606 | BIOGRID |
| DDX1 | RTCB | Affinity Capture-MS | 27173435 | 9606 | 9606 | BIOGRID |
| DDX1 | RIF1 | Affinity Capture-MS | 28544931 | 9606 | 9606 | BIOGRID |
| DDX1 | RIF1 | Affinity Capture-Western | 28544931 | 9606 | 9606 | BIOGRID |
| DDX1 | RIF1 | Co-localization | 28544931 | 9606 | 9606 | BIOGRID |
| DDX1 | ERCC6 | Affinity Capture-Western | 26030138 | 9606 | 9606 | BIOGRID |
| DDX1 | ZFP64 | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
| DDX1 | C14orf166 | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
| DDX1 | C14orf166 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| DDX1 | C2orf49 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| DDX1 | CUL1 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| DDX1 | FAM98A | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| DDX1 | FAM98C | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| DDX1 | FBXO42 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| DDX1 | LMAN1 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| DDX1 | RTCB | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| DDX1 | C2orf44 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
Annotation of DDX1
TCGA cancer survival map of DDX1
Expression of DDX1
Disease information of DDX1