TcoF overview
| TcoF: | DDX54 | |
| GeneID: | 78986 | |
| Name: | ATP-dependent RNA helicase DDX54 | |
| Ensembl: | ENSG00000123064 | |
| Species: | Human | |
| Class: | class HC | |
| Family: | RNA helicase | |
| Disease: | 6 | |
| Go term: | 15 | |
| Pathway: | 2 | |
| Hallmark: | -- | |
| Super Enhancer: |
chr12:113606661-113613498 chr12:113608925-113611298 chr12:113485158-113575115 chr12:113486283-113574819 chr12:113486259-113580981 |
|
| Enhancer: |
chr12:113535830-113536620 chr12:113770770-113772790 chr12:113591210-113592210 chr12:113571330-113573200 chr12:113590690-113591010 chr12:113778580-113780060 chr12:113796700-113798520 chr12:113840220-113841570 chr12:113589830-113590580 chr12:113436220-113437980 chr12:113531030-113531340 chr12:113610370-113612440 chr12:113235530-113236530 chr12:113285650-113286970 chr12:113587720-113589720 chr12:113682170-113683270 chr12:113689250-113691040 chr12:113736390-113736570 chr12:113737780-113739120 chr12:113687870-113688630 chr12:113376510-113378960 chr12:113456530-113458310 chr12:113502330-113504010 chr12:113567900-113568680 chr12:113705760-113706070 chr12:113706680-113707560 chr12:113704450-113705640 chr12:113695820-113698170 chr12:113565680-113565860 chr12:113565980-113567810 chr12:113716040-113716570 chr12:113716640-113717060 chr12:113664860-113666470 chr12:113830960-113831690 chr12:113345020-113346340 chr12:113534410-113534510 chr12:113541890-113541960 chr12:113607710-113610150 chr12:113612580-113612670 chr12:113539960-113541750 chr12:113347270-113347600 chr12:113362440-113364770 chr12:113511930-113514410 chr12:113519770-113520440 chr12:113510850-113511740 chr12:113306400-113307560 chr12:113370290-113371090 chr12:113392510-113393480 chr12:113439320-113440730 chr12:113592440-113593060 chr12:113907150-113909130 chr12:113818650-113820000 chr12:113381220-113382280 chr12:113542100-113542840 chr12:113628280-113629110 chr12:113748160-113748900 chr12:113280960-113281600 chr12:113708390-113710460 chr12:113710490-113711030 chr12:113729760-113730730 chr12:113759670-113761350 chr12:113763120-113765530 chr12:113766190-113768510 chr12:113903010-113904190 chr12:113277000-113279230 chr12:113500230-113502220 chr12:113357710-113360160 chr12:113673390-113675330 chr12:113675370-113677070 chr12:113593270-113594970 chr12:113745650-113748030 chr12:113904360-113905060 chr12:113905230-113905930 chr12:113744380-113745490 chr12:113805000-113806560 chr12:113711100-113711370 chr12:113753280-113753920 chr12:113496870-113497780 chr12:113498700-113499400 chr12:113641640-113643530 chr12:113714090-113714720 chr12:113786260-113787420 chr12:113729480-113729670 chr12:113250380-113251120 chr12:113259270-113260820 chr12:113533010-113533120 chr12:113533220-113533520 chr12:113617140-113617280 chr12:113564840-113565290 chr12:113717360-113717880 |
|
| Promoter: |
chr12:113594979-113623284 |
ChIP-seq based regulatory details of DDX54
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|
Downstream target genes of DDX54
Upstream regulatory details of DDX54
Protein-protein interaction of DDX54
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| DDX54 | ESR1 | Two-hybrid | 12466272 | 9606 | 9606 | BIOGRID |
| DDX54 | ESR1 | Reconstituted Complex | 12466272 | 9606 | 9606 | BIOGRID |
| DDX54 | ESR2 | Reconstituted Complex | 12466272 | 9606 | 9606 | BIOGRID |
| DDX54 | NR3C1 | Reconstituted Complex | 12466272 | 9606 | 9606 | BIOGRID |
| DDX54 | PGR | Reconstituted Complex | 12466272 | 9606 | 9606 | BIOGRID |
| DDX54 | APP | Reconstituted Complex | 21832049 | 9606 | 9606 | BIOGRID |
| DDX54 | SEMA4A | Two-hybrid | 21988832 | 9606 | 9606 | BIOGRID |
| DDX54 | POLR2G | Two-hybrid | 21988832 | 9606 | 9606 | BIOGRID |
| DDX54 | TMED9 | Two-hybrid | 21988832 | 9606 | 9606 | BIOGRID |
| DDX54 | SSB | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| DDX54 | DYNLT1 | Two-hybrid | 30217970 | 9606 | 9606 | BIOGRID |
| DDX54 | ZNF394 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| DDX54 | DVL3 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| DDX54 | WDR48 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
Annotation of DDX54
TCGA cancer survival map of DDX54
Expression of DDX54
Disease information of DDX54