TcoF overview
TcoF: GTF2F1
GeneID: 6596
Name: General transcription factor IIF subunit 1
Ensembl: ENSG00000125651
Species: Human
Class: NA
Family: GTF
Disease: 0
Go term: 29
Pathway: 34
Hallmark: --
Super Enhancer:

chr19:6392141-6412105 chr19:6392386-6414597

Enhancer:

chr19:6240370-6241420 chr19:6242700-6245160 chr19:6249310-6249740 chr19:6250070-6251620 chr19:6373040-6374210 chr19:6422450-6424460 chr19:6361780-6361870 chr19:6501640-6502160 chr19:6029580-6031020 chr19:6475950-6476860 chr19:6361950-6362450 chr19:6473390-6474660 chr19:6475410-6475490 chr19:6475760-6475840 chr19:6161310-6163540 chr19:6362550-6364030 chr19:6458340-6459260 chr19:6480060-6481680 chr19:6498240-6499720 chr19:6531320-6532790 chr19:6532820-6534610 chr19:6590140-6590850 chr19:6667160-6667420 chr19:6670170-6670300 chr19:6697140-6697350 chr19:6697570-6697660 chr19:6752760-6753460 chr19:6753650-6754060 chr19:6667460-6669860 chr19:6299430-6300360 chr19:6830720-6832100 chr19:6222700-6224960 chr19:6226710-6226980 chr19:6231850-6232090 chr19:6237860-6240180 chr19:6374390-6374470 chr19:6375630-6375710 chr19:6068520-6069170 chr19:6090990-6093490 chr19:6107910-6110400 chr19:6216520-6217960 chr19:6402060-6404040 chr19:6501410-6501520 chr19:6586420-6588240 chr19:6410650-6413110 chr19:6464800-6465550 chr19:6730400-6730990 chr19:6479070-6479670 chr19:6479720-6479860 chr19:6610270-6612270 chr19:6613470-6614560 chr19:6745010-6746030 chr19:6868040-6868860 chr19:6457600-6458200 chr19:6686300-6686750 chr19:6828910-6829790 chr19:6925320-6926370 chr19:6947270-6948860 chr19:6987650-6988790 chr19:6166030-6167050 chr19:6754180-6754260 chr19:6339930-6342070 chr19:6037880-6039990 chr19:6543050-6545480 chr19:6556190-6557270 chr19:6576030-6578320 chr19:6579680-6580890 chr19:6583550-6584860 chr19:6589710-6590110 chr19:6603200-6604550 chr19:6640760-6643140 chr19:6653640-6655960 chr19:6535940-6538430 chr19:6764980-6767390 chr19:6608440-6609900 chr19:6017590-6019840 chr19:6414130-6415150 chr19:6475600-6475710 chr19:6476980-6477080 chr19:6678040-6678160 chr19:6678300-6678380 chr19:6710400-6710640 chr19:6710860-6710990 chr19:6761010-6761570 chr19:6471090-6471270 chr19:6471310-6471410 chr19:6415310-6415390 chr19:6415470-6415540 chr19:6415750-6415810 chr19:6415910-6416300 chr19:6421690-6422350 chr19:6718420-6719220 chr19:6743850-6744560 chr19:6744710-6744810 chr19:6828180-6828420 chr19:6828500-6828630 chr19:6828720-6828820 chr19:6666630-6667120 chr19:6693500-6694440 chr19:6694650-6696380 chr19:6711210-6712260 chr19:6712420-6712510 chr19:6712640-6713190 chr19:6713330-6713410 chr19:6713520-6714000 chr19:6714090-6714170 chr19:6714260-6714360 chr19:6718180-6718250 chr19:6719420-6720520 chr19:6733920-6734010 chr19:6734060-6734190 chr19:6734320-6734690 chr19:5775670-5776170 chr19:5790350-5791060 chr19:5826090-5827750 chr19:5828340-5830640 chr19:5914320-5914390 chr19:5925750-5927970 chr19:5933690-5934330 chr19:5934600-5936680 chr19:5955900-5957920 chr19:5964920-5966940 chr19:6070230-6072470 chr19:6075100-6075920 chr19:6075950-6078210 chr19:6218050-6220340 chr19:6220980-6222130 chr19:5946170-5948320 chr19:6098270-6098570 chr19:6781060-6782090 chr19:6519340-6519650 chr19:6263160-6264940 chr19:6267540-6268320 chr19:6291470-6292580 chr19:6312510-6313950 chr19:6676510-6677840 chr19:6678470-6679130 chr19:6682240-6684390 chr19:5995660-5997070 chr19:6160200-6161220 chr19:6273300-6274890 chr19:6349990-6352020 chr19:6352570-6353450 chr19:5737940-5738980 chr19:5789780-5790050 chr19:5850460-5851400 chr19:5879480-5881670 chr19:5889020-5891280 chr19:5914500-5914570 chr19:5914750-5914950 chr19:6201540-6202440 chr19:6270770-6273100 chr19:6743270-6743500 chr19:5881690-5882820 chr19:5915160-5915230 chr19:5950670-5951400 chr19:6245810-6246540 chr19:6268430-6270580 chr19:6198040-6200520 chr19:6571590-6573360 chr19:5937030-5938960 chr19:6333010-6333460

Promoter:

chr19:6379583-6393992

 ChIP-seq based regulatory details of GTF2F1
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
TcoF_00_40148 GTF2F1 cell line GM12878 - Blood ReMap
TcoF_00_40126 GTF2F1 cell line MCF-7 - Breast ReMap
TcoF_00_40105 GTF2F1 cell line Hep-G2 - Liver ReMap
TcoF_00_40087 GTF2F1 cell line K-562 - Bone Marrow ReMap
TcoF_00_40103 GTF2F1 cell line K-562 - Bone Marrow ReMap
TcoF_00_30615 GTF2F1 cell line K-562 GSM935501 Bone Marrow ChIP-Atlas
TcoF_00_40063 GTF2F1 cell line K-562 GSM935501 Bone Marrow ReMap
TcoF_00_30620 GTF2F1 cell line HeLa GSM935554 Uterus ChIP-Atlas
TcoF_00_40054 GTF2F1 cell line HeLa-S3 GSM935554 Uterus ReMap
TcoF_00_30623 GTF2F1 cell line hESC H1 GSM935581 Embryo ChIP-Atlas
TcoF_00_40050 GTF2F1 cell line WA01 GSM935581 None ReMap
 Downstream target genes of GTF2F1
 Protein-protein interaction of GTF2F1
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
GTF2F1 GTF2B Co-purification 9159119 9606 9606 BIOGRID
GTF2F1 GTF2B Reconstituted Complex 9159119 9606 9606 BIOGRID
GTF2F1 TBP Co-purification 9159119 9606 9606 BIOGRID
GTF2F1 TBP Reconstituted Complex 9159119 9606 9606 BIOGRID
GTF2F1 TAF11 Co-purification 9159119 9606 9606 BIOGRID
GTF2F1 TAF11 Reconstituted Complex 9159119 9606 9606 BIOGRID
GTF2F1 GTF2E1 Co-purification 9159119 9606 9606 BIOGRID
GTF2F1 GTF2E1 Reconstituted Complex 9159119 9606 9606 BIOGRID
GTF2F1 GTF2H4 Co-purification 9159119 9606 9606 BIOGRID
GTF2F1 GTF2H4 Reconstituted Complex 9159119 9606 9606 BIOGRID
GTF2F1 FEZ1 Two-hybrid 16169070 9606 9606 BIOGRID
GTF2F1 PTN Two-hybrid 16169070 9606 9606 BIOGRID
GTF2F1 GTF2A1 Reconstituted Complex 11509574 9606 9606 BIOGRID
GTF2F1 CTDP1 Two-hybrid 9765293 9606 9606 BIOGRID
GTF2F1 CTDP1 Affinity Capture-Western 9765293 9606 9606 BIOGRID
GTF2F1 CTDP1 Reconstituted Complex 9765293 9606 9606 BIOGRID
GTF2F1 GTF2E2 Reconstituted Complex 9677423 9606 9606 BIOGRID
GTF2F1 GTF2E2 Reconstituted Complex 11113176 9606 9606 BIOGRID
GTF2F1 SRF Reconstituted Complex 8106390 9606 9606 BIOGRID
GTF2F1 HNRNPU Affinity Capture-Western 10490622 9606 9606 BIOGRID
GTF2F1 POLR2A Affinity Capture-MS 17643375 9606 9606 BIOGRID
GTF2F1 POLR2B Affinity Capture-MS 17643375 9606 9606 BIOGRID
GTF2F1 KPNA2 Affinity Capture-MS 17643375 9606 9606 BIOGRID
GTF2F1 RFC2 Affinity Capture-MS 17643375 9606 9606 BIOGRID
GTF2F1 TRIM27 Two-hybrid 20211142 9606 9606 BIOGRID
GTF2F1 PARP1 Reconstituted Complex 16204234 9606 9606 BIOGRID
GTF2F1 POLR2A Biochemical Activity 12591939 9606 9606 BIOGRID
GTF2F1 HNRNPU Affinity Capture-Western 15711563 9606 9606 BIOGRID
GTF2F1 POLR2A Affinity Capture-Western 15711563 9606 9606 BIOGRID
GTF2F1 POLR2A Affinity Capture-Western 9121429 9606 9606 BIOGRID
GTF2F1 GTF2E1 Affinity Capture-Western 9121429 9606 9606 BIOGRID
GTF2F1 ERCC2 Affinity Capture-Western 9121429 9606 9606 BIOGRID
GTF2F1 GTF2H1 Affinity Capture-Western 9121429 9606 9606 BIOGRID
GTF2F1 CDK8 Affinity Capture-Western 9121429 9606 9606 BIOGRID
GTF2F1 CCNC Affinity Capture-Western 9121429 9606 9606 BIOGRID
GTF2F1 GTF2B Reconstituted Complex 16878124 9606 9606 BIOGRID
GTF2F1 PSAP Co-fractionation 22863883 9606 9606 BIOGRID
GTF2F1 PUS1 Co-fractionation 22863883 9606 9606 BIOGRID
GTF2F1 ABL1 Far Western 7533294 9606 9606 BIOGRID
GTF2F1 GTF2F2 Co-fractionation 26344197 9606 9606 BIOGRID
GTF2F1 HIRIP3 Co-fractionation 26344197 9606 9606 BIOGRID
GTF2F1 SRRM1 Co-fractionation 26344197 9606 9606 BIOGRID
GTF2F1 CTDP1 Co-crystal Structure 12732728 9606 9606 BIOGRID
GTF2F1 MYC Reconstituted Complex 30415952 9606 9606 BIOGRID
GTF2F1 POLR2A Reconstituted Complex 30415952 9606 9606 BIOGRID
GTF2F1 GTF2F2 Reconstituted Complex 30415952 9606 9606 BIOGRID
GTF2F1 CDK9 Reconstituted Complex 30415952 9606 9606 BIOGRID
GTF2F1 MYC Co-localization 30415952 9606 9606 BIOGRID
GTF2F1 GTF2H1 Affinity Capture-MS 24981860 9606 9606 BIOGRID
GTF2F1 GTF2H4 Affinity Capture-MS 24981860 9606 9606 BIOGRID
GTF2F1 GTF2F2 Affinity Capture-MS 24981860 9606 9606 BIOGRID
GTF2F1 tat Affinity Capture-Western 9121429 9606 11676 BIOGRID
GTF2F1 tat Reconstituted Complex 9121429 9606 11676 BIOGRID
 Annotation of GTF2F1
 TCGA cancer survival map of GTF2F1


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  GTF2F1