TcoF: | GTF2F1 | |
GeneID: | 6596 | |
Name: | General transcription factor IIF subunit 1 | |
Ensembl: | ENSG00000125651 | |
Species: | Human | |
Class: | NA | |
Family: | GTF | |
Disease: | 0 | |
Go term: | 29 | |
Pathway: | 34 | |
Hallmark: | -- | |
Super Enhancer: |
chr19:6392141-6412105 chr19:6392386-6414597 |
|
Enhancer: |
chr19:6240370-6241420 chr19:6242700-6245160 chr19:6249310-6249740 chr19:6250070-6251620 chr19:6373040-6374210 chr19:6422450-6424460 chr19:6361780-6361870 chr19:6501640-6502160 chr19:6029580-6031020 chr19:6475950-6476860 chr19:6361950-6362450 chr19:6473390-6474660 chr19:6475410-6475490 chr19:6475760-6475840 chr19:6161310-6163540 chr19:6362550-6364030 chr19:6458340-6459260 chr19:6480060-6481680 chr19:6498240-6499720 chr19:6531320-6532790 chr19:6532820-6534610 chr19:6590140-6590850 chr19:6667160-6667420 chr19:6670170-6670300 chr19:6697140-6697350 chr19:6697570-6697660 chr19:6752760-6753460 chr19:6753650-6754060 chr19:6667460-6669860 chr19:6299430-6300360 chr19:6830720-6832100 chr19:6222700-6224960 chr19:6226710-6226980 chr19:6231850-6232090 chr19:6237860-6240180 chr19:6374390-6374470 chr19:6375630-6375710 chr19:6068520-6069170 chr19:6090990-6093490 chr19:6107910-6110400 chr19:6216520-6217960 chr19:6402060-6404040 chr19:6501410-6501520 chr19:6586420-6588240 chr19:6410650-6413110 chr19:6464800-6465550 chr19:6730400-6730990 chr19:6479070-6479670 chr19:6479720-6479860 chr19:6610270-6612270 chr19:6613470-6614560 chr19:6745010-6746030 chr19:6868040-6868860 chr19:6457600-6458200 chr19:6686300-6686750 chr19:6828910-6829790 chr19:6925320-6926370 chr19:6947270-6948860 chr19:6987650-6988790 chr19:6166030-6167050 chr19:6754180-6754260 chr19:6339930-6342070 chr19:6037880-6039990 chr19:6543050-6545480 chr19:6556190-6557270 chr19:6576030-6578320 chr19:6579680-6580890 chr19:6583550-6584860 chr19:6589710-6590110 chr19:6603200-6604550 chr19:6640760-6643140 chr19:6653640-6655960 chr19:6535940-6538430 chr19:6764980-6767390 chr19:6608440-6609900 chr19:6017590-6019840 chr19:6414130-6415150 chr19:6475600-6475710 chr19:6476980-6477080 chr19:6678040-6678160 chr19:6678300-6678380 chr19:6710400-6710640 chr19:6710860-6710990 chr19:6761010-6761570 chr19:6471090-6471270 chr19:6471310-6471410 chr19:6415310-6415390 chr19:6415470-6415540 chr19:6415750-6415810 chr19:6415910-6416300 chr19:6421690-6422350 chr19:6718420-6719220 chr19:6743850-6744560 chr19:6744710-6744810 chr19:6828180-6828420 chr19:6828500-6828630 chr19:6828720-6828820 chr19:6666630-6667120 chr19:6693500-6694440 chr19:6694650-6696380 chr19:6711210-6712260 chr19:6712420-6712510 chr19:6712640-6713190 chr19:6713330-6713410 chr19:6713520-6714000 chr19:6714090-6714170 chr19:6714260-6714360 chr19:6718180-6718250 chr19:6719420-6720520 chr19:6733920-6734010 chr19:6734060-6734190 chr19:6734320-6734690 chr19:5775670-5776170 chr19:5790350-5791060 chr19:5826090-5827750 chr19:5828340-5830640 chr19:5914320-5914390 chr19:5925750-5927970 chr19:5933690-5934330 chr19:5934600-5936680 chr19:5955900-5957920 chr19:5964920-5966940 chr19:6070230-6072470 chr19:6075100-6075920 chr19:6075950-6078210 chr19:6218050-6220340 chr19:6220980-6222130 chr19:5946170-5948320 chr19:6098270-6098570 chr19:6781060-6782090 chr19:6519340-6519650 chr19:6263160-6264940 chr19:6267540-6268320 chr19:6291470-6292580 chr19:6312510-6313950 chr19:6676510-6677840 chr19:6678470-6679130 chr19:6682240-6684390 chr19:5995660-5997070 chr19:6160200-6161220 chr19:6273300-6274890 chr19:6349990-6352020 chr19:6352570-6353450 chr19:5737940-5738980 chr19:5789780-5790050 chr19:5850460-5851400 chr19:5879480-5881670 chr19:5889020-5891280 chr19:5914500-5914570 chr19:5914750-5914950 chr19:6201540-6202440 chr19:6270770-6273100 chr19:6743270-6743500 chr19:5881690-5882820 chr19:5915160-5915230 chr19:5950670-5951400 chr19:6245810-6246540 chr19:6268430-6270580 chr19:6198040-6200520 chr19:6571590-6573360 chr19:5937030-5938960 chr19:6333010-6333460 |
|
Promoter: |
chr19:6379583-6393992 |
Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
---|---|---|---|---|---|---|
TcoF_00_40148 | GTF2F1 | cell line | GM12878 | - | Blood | ReMap |
TcoF_00_40126 | GTF2F1 | cell line | MCF-7 | - | Breast | ReMap |
TcoF_00_40105 | GTF2F1 | cell line | Hep-G2 | - | Liver | ReMap |
TcoF_00_40087 | GTF2F1 | cell line | K-562 | - | Bone Marrow | ReMap |
TcoF_00_40103 | GTF2F1 | cell line | K-562 | - | Bone Marrow | ReMap |
TcoF_00_30615 | GTF2F1 | cell line | K-562 | GSM935501 | Bone Marrow | ChIP-Atlas |
TcoF_00_40063 | GTF2F1 | cell line | K-562 | GSM935501 | Bone Marrow | ReMap |
TcoF_00_30620 | GTF2F1 | cell line | HeLa | GSM935554 | Uterus | ChIP-Atlas |
TcoF_00_40054 | GTF2F1 | cell line | HeLa-S3 | GSM935554 | Uterus | ReMap |
TcoF_00_30623 | GTF2F1 | cell line | hESC H1 | GSM935581 | Embryo | ChIP-Atlas |
TcoF_00_40050 | GTF2F1 | cell line | WA01 | GSM935581 | None | ReMap |
OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
---|---|---|---|---|---|---|
GTF2F1 | GTF2B | Co-purification | 9159119 | 9606 | 9606 | BIOGRID |
GTF2F1 | GTF2B | Reconstituted Complex | 9159119 | 9606 | 9606 | BIOGRID |
GTF2F1 | TBP | Co-purification | 9159119 | 9606 | 9606 | BIOGRID |
GTF2F1 | TBP | Reconstituted Complex | 9159119 | 9606 | 9606 | BIOGRID |
GTF2F1 | TAF11 | Co-purification | 9159119 | 9606 | 9606 | BIOGRID |
GTF2F1 | TAF11 | Reconstituted Complex | 9159119 | 9606 | 9606 | BIOGRID |
GTF2F1 | GTF2E1 | Co-purification | 9159119 | 9606 | 9606 | BIOGRID |
GTF2F1 | GTF2E1 | Reconstituted Complex | 9159119 | 9606 | 9606 | BIOGRID |
GTF2F1 | GTF2H4 | Co-purification | 9159119 | 9606 | 9606 | BIOGRID |
GTF2F1 | GTF2H4 | Reconstituted Complex | 9159119 | 9606 | 9606 | BIOGRID |
GTF2F1 | FEZ1 | Two-hybrid | 16169070 | 9606 | 9606 | BIOGRID |
GTF2F1 | PTN | Two-hybrid | 16169070 | 9606 | 9606 | BIOGRID |
GTF2F1 | GTF2A1 | Reconstituted Complex | 11509574 | 9606 | 9606 | BIOGRID |
GTF2F1 | CTDP1 | Two-hybrid | 9765293 | 9606 | 9606 | BIOGRID |
GTF2F1 | CTDP1 | Affinity Capture-Western | 9765293 | 9606 | 9606 | BIOGRID |
GTF2F1 | CTDP1 | Reconstituted Complex | 9765293 | 9606 | 9606 | BIOGRID |
GTF2F1 | GTF2E2 | Reconstituted Complex | 9677423 | 9606 | 9606 | BIOGRID |
GTF2F1 | GTF2E2 | Reconstituted Complex | 11113176 | 9606 | 9606 | BIOGRID |
GTF2F1 | SRF | Reconstituted Complex | 8106390 | 9606 | 9606 | BIOGRID |
GTF2F1 | HNRNPU | Affinity Capture-Western | 10490622 | 9606 | 9606 | BIOGRID |
GTF2F1 | POLR2A | Affinity Capture-MS | 17643375 | 9606 | 9606 | BIOGRID |
GTF2F1 | POLR2B | Affinity Capture-MS | 17643375 | 9606 | 9606 | BIOGRID |
GTF2F1 | KPNA2 | Affinity Capture-MS | 17643375 | 9606 | 9606 | BIOGRID |
GTF2F1 | RFC2 | Affinity Capture-MS | 17643375 | 9606 | 9606 | BIOGRID |
GTF2F1 | TRIM27 | Two-hybrid | 20211142 | 9606 | 9606 | BIOGRID |
GTF2F1 | PARP1 | Reconstituted Complex | 16204234 | 9606 | 9606 | BIOGRID |
GTF2F1 | POLR2A | Biochemical Activity | 12591939 | 9606 | 9606 | BIOGRID |
GTF2F1 | HNRNPU | Affinity Capture-Western | 15711563 | 9606 | 9606 | BIOGRID |
GTF2F1 | POLR2A | Affinity Capture-Western | 15711563 | 9606 | 9606 | BIOGRID |
GTF2F1 | POLR2A | Affinity Capture-Western | 9121429 | 9606 | 9606 | BIOGRID |
GTF2F1 | GTF2E1 | Affinity Capture-Western | 9121429 | 9606 | 9606 | BIOGRID |
GTF2F1 | ERCC2 | Affinity Capture-Western | 9121429 | 9606 | 9606 | BIOGRID |
GTF2F1 | GTF2H1 | Affinity Capture-Western | 9121429 | 9606 | 9606 | BIOGRID |
GTF2F1 | CDK8 | Affinity Capture-Western | 9121429 | 9606 | 9606 | BIOGRID |
GTF2F1 | CCNC | Affinity Capture-Western | 9121429 | 9606 | 9606 | BIOGRID |
GTF2F1 | GTF2B | Reconstituted Complex | 16878124 | 9606 | 9606 | BIOGRID |
GTF2F1 | PSAP | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
GTF2F1 | PUS1 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
GTF2F1 | ABL1 | Far Western | 7533294 | 9606 | 9606 | BIOGRID |
GTF2F1 | GTF2F2 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
GTF2F1 | HIRIP3 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
GTF2F1 | SRRM1 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
GTF2F1 | CTDP1 | Co-crystal Structure | 12732728 | 9606 | 9606 | BIOGRID |
GTF2F1 | MYC | Reconstituted Complex | 30415952 | 9606 | 9606 | BIOGRID |
GTF2F1 | POLR2A | Reconstituted Complex | 30415952 | 9606 | 9606 | BIOGRID |
GTF2F1 | GTF2F2 | Reconstituted Complex | 30415952 | 9606 | 9606 | BIOGRID |
GTF2F1 | CDK9 | Reconstituted Complex | 30415952 | 9606 | 9606 | BIOGRID |
GTF2F1 | MYC | Co-localization | 30415952 | 9606 | 9606 | BIOGRID |
GTF2F1 | GTF2H1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
GTF2F1 | GTF2H4 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
GTF2F1 | GTF2F2 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
GTF2F1 | tat | Affinity Capture-Western | 9121429 | 9606 | 11676 | BIOGRID |
GTF2F1 | tat | Reconstituted Complex | 9121429 | 9606 | 11676 | BIOGRID |