TcoF overview
TcoF: HCFC1
GeneID: 8841
Name: Host cell factor 1
Ensembl: ENSG00000172534
Species: Human
Class: class HC
Family: Others
Disease: 7
Go term: 36
Pathway: 2
Hallmark: 1
Super Enhancer:

chrX:153267161-153285318 chrX:153267067-153281444 chrX:153231541-153240605 chrX:153234479-153239181 chrX:153233348-153238065 chrX:153231138-153240366 chrX:153235301-153239211 chrX:153231215-153240604 chrX:153231916-153240583 chrX:153232041-153240854 chrX:153231505-153240763 chrX:153230653-153240803 chrX:153231331-153240904 chrX:153231854-153240534 chrX:153230831-153239333 chrX:153233727-153239712 chrX:153232117-153240862 chrX:153225164-153240607 chrX:153231679-153240750 chrX:153231647-153239205 chrX:153231627-153239996 chrX:153231485-153239855 chrX:153235250-153239289 chrX:153234325-153240250 chrX:153234151-153239695 chrX:153233519-153240611 chrX:153230207-153240849 chrX:153234436-153239571 chrX:153233850-153239453 chrX:153229990-153241018 chrX:153230134-153241246 chrX:153234658-153239153 chrX:153231671-153240477 chrX:153228845-153240559 chrX:153232463-153240904 chrX:153232561-153241653 chrX:153233416-153241160 chrX:153233535-153240558 chrX:153233977-153240261 chrX:153231205-153240151 chrX:153234102-153240305 chrX:153231205-153240151 chrX:153232668-153239779 chrX:153234174-153240391 chrX:153234570-153239539 chrX:153232661-153240181 chrX:153231680-153240623 chrX:153233253-153240207 chrX:153233043-153240403

Enhancer:

chrX:153031040-153031610 chrX:153031780-153032320 chrX:153277370-153277970 chrX:153278130-153278490 chrX:153199930-153200330 chrX:153284530-153284640 chrX:153198030-153199390 chrX:153199460-153199820 chrX:153218410-153219050 chrX:153278880-153279490 chrX:153209610-153209760 chrX:153209870-153210030 chrX:153579410-153579940 chrX:153580060-153580250 chrX:153174620-153174890 chrX:153186610-153186810 chrX:153186980-153187050 chrX:153081900-153083390 chrX:153138150-153138680 chrX:153140500-153141210 chrX:153283570-153283740 chrX:153283810-153284040 chrX:153284240-153284420 chrX:153284780-153284880 chrX:153285050-153285120 chrX:153029760-153030920 chrX:153219220-153219510 chrX:153282520-153283450 chrX:153762710-153763380 chrX:153266310-153268770 chrX:153272380-153274580 chrX:153361460-153363060 chrX:153268920-153270280 chrX:153207480-153207740 chrX:153225870-153226990 chrX:152955060-152955820 chrX:152955960-152956750 chrX:153279730-153281480 chrX:153281550-153281880 chrX:153577400-153577720 chrX:153608160-153608300 chrX:153608380-153608590 chrX:153608730-153609110 chrX:153176640-153178150 chrX:153311110-153313600 chrX:153595220-153595760 chrX:153304890-153306670 chrX:153306850-153308010 chrX:153308510-153309140 chrX:153310250-153310920 chrX:153535420-153537690 chrX:153553770-153555930 chrX:152892460-152893450 chrX:153186260-153186540 chrX:152862440-152864410 chrX:152751170-152751920 chrX:152752120-152752600 chrX:152752610-152754920 chrX:152786060-152786980 chrX:152957010-152957420 chrX:152957560-152958490 chrX:152958630-152958710 chrX:152958820-152958910 chrX:152959040-152959350 chrX:152959720-152959790 chrX:152959900-152959980 chrX:152960340-152960520 chrX:152963520-152965940 chrX:152966430-152967460 chrX:152967560-152968380 chrX:153008800-153008940 chrX:153046600-153046670 chrX:153046800-153046950 chrX:153047070-153047190 chrX:153047290-153047570 chrX:153264620-153266010 chrX:153388430-153390880 chrX:153577930-153578010 chrX:153578240-153578390 chrX:153578800-153579270 chrX:153580390-153580540 chrX:153581570-153581660 chrX:153587520-153587610 chrX:153592530-153592620 chrX:153594590-153594670 chrX:153594840-153594920 chrX:153595010-153595090 chrX:153595910-153596000 chrX:153596110-153596200 chrX:153609160-153609240 chrX:153628970-153629040 chrX:153631180-153631280 chrX:153665650-153666860 chrX:153672690-153673670 chrX:153686770-153688490 chrX:153706400-153706620 chrX:153706750-153707060 chrX:153713990-153714100 chrX:153714320-153714560 chrX:153742140-153744080 chrX:153762380-153762550 chrX:153764260-153764350 chrX:153764390-153765460 chrX:153823850-153825690 chrX:153831670-153833120 chrX:153835720-153836080 chrX:152599740-152602090 chrX:153189420-153191580 chrX:153386930-153388190 chrX:153583440-153585080 chrX:153714670-153714870 chrX:153763600-153764150 chrX:153827980-153830400 chrX:153733520-153734480 chrX:153121950-153122700 chrX:153206620-153206930 chrX:153215230-153215520 chrX:153275300-153275950 chrX:152888140-152889370 chrX:153033370-153033660 chrX:153208530-153208990 chrX:153209170-153209340 chrX:153356850-153357640 chrX:153359370-153361130 chrX:153207110-153207400 chrX:153298710-153299520 chrX:153339100-153340730 chrX:153357770-153358900 chrX:152821880-152822370 chrX:152825400-152826130 chrX:152858190-152860000 chrX:153047660-153048220 chrX:153048330-153048400 chrX:153048570-153048680 chrX:153048700-153049200 chrX:153049340-153049420 chrX:153070360-153070550 chrX:153070660-153070950 chrX:153645430-153647880 chrX:153197880-153197990 chrX:153033880-153034400 chrX:153196720-153196880 chrX:153205690-153205830 chrX:153205910-153206340 chrX:153589940-153590030 chrX:153590160-153590340 chrX:153590520-153590600 chrX:153590950-153591020 chrX:153591150-153592380 chrX:153592740-153592890 chrX:153593090-153593180 chrX:153593330-153593500 chrX:153593630-153593710 chrX:153593860-153594390 chrX:152862040-152862370 chrX:152996090-152997200

Promoter:

chrX:153213008-153237269

 ChIP-seq based regulatory details of HCFC1
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
TcoF_00_10011 HCFC1 cell line GM12878 - Blood ENCODE
TcoF_00_10020 HCFC1 cell line GM12878 - Blood ENCODE
TcoF_00_10053 HCFC1 cell line HepG2 - Liver ENCODE
TcoF_00_10058 HCFC1 cell line HepG2 - Liver ENCODE
TcoF_00_10122 HCFC1 cell line MCF-7 - Breast ENCODE
TcoF_00_40494 HCFC1 cell line GM12878 - Blood ReMap
TcoF_00_40516 HCFC1 cell line MCF-7 - Breast ReMap
TcoF_00_40496 HCFC1 cell line Hep-G2 - Liver ReMap
TcoF_00_20930 HCFC1 cell line MCF-7 - Breast Cistrome
TcoF_00_20555 HCFC1 cell line HeLa-S3 GSM1003618 Uterus Cistrome
TcoF_00_20050 HCFC1 cell line K562 GSM1003625 Bone Marrow Cistrome
TcoF_00_40437 HCFC1 cell line K-562 GSM1003625 Bone Marrow ReMap
TcoF_00_20442 HCFC1 cell line HEK293T GSM1037511 Embryonic Kidney Cistrome
TcoF_00_30068 HCFC1 cell line Erythroblasts GSM3132542 Blood ChIP-Atlas
TcoF_00_20549 HCFC1 cell line HeLa GSM779425 Uterus Cistrome
TcoF_00_40687 HCFC1 cell line HeLa GSM779425 Uterus ReMap
TcoF_00_20550 HCFC1 cell line HeLa GSM779426 Uterus Cistrome
TcoF_00_40429 HCFC1 cell line HeLa-S3 GSM935379 Uterus ReMap
 Downstream target genes of HCFC1
 Protein-protein interaction of HCFC1
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
HCFC1 GABPA Two-hybrid 10675337 9606 9606 BIOGRID
HCFC1 HCFC2 Co-purification 15199122 9606 9606 BIOGRID
HCFC1 MEN1 Co-purification 15199122 9606 9606 BIOGRID
HCFC1 KMT2A Affinity Capture-Western 15199122 9606 9606 BIOGRID
HCFC1 RBBP5 Co-purification 15199122 9606 9606 BIOGRID
HCFC1 WDR5 Co-purification 15199122 9606 9606 BIOGRID
HCFC1 SIN3A Affinity Capture-Western 15199122 9606 9606 BIOGRID
HCFC1 SIN3A Affinity Capture-MS 12670868 9606 9606 BIOGRID
HCFC1 HDAC1 Affinity Capture-MS 12670868 9606 9606 BIOGRID
HCFC1 HDAC2 Affinity Capture-MS 12670868 9606 9606 BIOGRID
HCFC1 SUDS3 Affinity Capture-MS 12670868 9606 9606 BIOGRID
HCFC1 RBBP4 Affinity Capture-MS 12670868 9606 9606 BIOGRID
HCFC1 RBBP7 Affinity Capture-MS 12670868 9606 9606 BIOGRID
HCFC1 SETD1A Affinity Capture-MS 12670868 9606 9606 BIOGRID
HCFC1 ASCL2 Affinity Capture-MS 12670868 9606 9606 BIOGRID
HCFC1 WDR5 Affinity Capture-MS 12670868 9606 9606 BIOGRID
HCFC1 OGT Affinity Capture-MS 12670868 9606 9606 BIOGRID
HCFC1 HSP90AA1 Affinity Capture-MS 12670868 9606 9606 BIOGRID
HCFC1 HSPA4 Affinity Capture-MS 12670868 9606 9606 BIOGRID
HCFC1 HSPA8 Affinity Capture-MS 12670868 9606 9606 BIOGRID
HCFC1 SP1 Affinity Capture-MS 12670868 9606 9606 BIOGRID
HCFC1 SP1 Affinity Capture-Western 12670868 9606 9606 BIOGRID
HCFC1 SIN3A Affinity Capture-Western 12670868 9606 9606 BIOGRID
HCFC1 SIN3B Affinity Capture-Western 12670868 9606 9606 BIOGRID
HCFC1 OGT Affinity Capture-Western 12670868 9606 9606 BIOGRID
HCFC1 HDAC1 Affinity Capture-Western 12670868 9606 9606 BIOGRID
HCFC1 HDAC2 Affinity Capture-Western 12670868 9606 9606 BIOGRID
HCFC1 SUDS3 Affinity Capture-Western 12670868 9606 9606 BIOGRID
HCFC1 PDCD2 Two-hybrid 12149646 9606 9606 BIOGRID
HCFC1 CREB3 Two-hybrid 9658067 9606 9606 BIOGRID
HCFC1 PPP1CA Reconstituted Complex 10637318 9606 9606 BIOGRID
HCFC1 POU2F1 Co-purification 8454622 9606 9606 BIOGRID
HCFC1 GABPA Reconstituted Complex 10675337 9606 9606 BIOGRID
HCFC1 ZBTB17 Two-hybrid 12244100 9606 9606 BIOGRID
HCFC1 ZBTB17 Affinity Capture-Western 12244100 9606 9606 BIOGRID
HCFC1 ZBTB17 Reconstituted Complex 12244100 9606 9606 BIOGRID
HCFC1 CREB3 Two-hybrid 9389645 9606 9606 BIOGRID
HCFC1 CREB3 Affinity Capture-Western 9389645 9606 9606 BIOGRID
HCFC1 THAP3 Reconstituted Complex 20200153 9606 9606 BIOGRID
HCFC1 THAP1 Affinity Capture-Western 20200153 9606 9606 BIOGRID
HCFC1 OGT Affinity Capture-Western 20200153 9606 9606 BIOGRID
HCFC1 THAP1 Co-localization 20200153 9606 9606 BIOGRID
HCFC1 ASF1B Two-hybrid 20133788 9606 9606 BIOGRID
HCFC1 ASF1B Affinity Capture-Western 20133788 9606 9606 BIOGRID
HCFC1 SIN3A Affinity Capture-Western 20126307 9606 9606 BIOGRID
HCFC1 BAP1 Affinity Capture-Western 19815555 9606 9606 BIOGRID
HCFC1 NFE2L1 Two-hybrid 20211142 9606 9606 BIOGRID
HCFC1 THAP7 Two-hybrid 20211142 9606 9606 BIOGRID
HCFC1 E2F1 Affinity Capture-Western 17612494 9606 9606 BIOGRID
HCFC1 E2F3 Affinity Capture-Western 17612494 9606 9606 BIOGRID
HCFC1 E2F4 Affinity Capture-Western 17612494 9606 9606 BIOGRID
HCFC1 E2F1 Two-hybrid 17612494 9606 9606 BIOGRID
HCFC1 E2F3 Two-hybrid 17612494 9606 9606 BIOGRID
HCFC1 E2F4 Two-hybrid 17612494 9606 9606 BIOGRID
HCFC1 OGT Affinity Capture-Western 21285374 9606 9606 BIOGRID
HCFC1 THAP11 Two-hybrid 18585351 9606 9606 BIOGRID
HCFC1 BAP1 Affinity Capture-Western 20805357 9606 9606 BIOGRID
HCFC1 YY1 Affinity Capture-Western 20805357 9606 9606 BIOGRID
HCFC1 SNRPB Affinity Capture-Western 12456665 9606 9606 BIOGRID
HCFC1 SNRPN Affinity Capture-Western 12456665 9606 9606 BIOGRID
HCFC1 THAP11 Affinity Capture-Western 22371484 9606 9606 BIOGRID
HCFC1 THAP11 Co-localization 22371484 9606 9606 BIOGRID
HCFC1 BAP1 Affinity Capture-Western 21642991 9606 9606 BIOGRID
HCFC1 HCFC1 Two-hybrid 11384994 9606 9606 BIOGRID
HCFC1 CLP1 Two-hybrid 11384994 9606 9606 BIOGRID
HCFC1 OGT Affinity Capture-Western 21295698 9606 9606 BIOGRID
HCFC1 WDR5 Co-fractionation 22939629 9606 9606 BIOGRID
HCFC1 OGT Co-fractionation 22939629 9606 9606 BIOGRID
HCFC1 RBBP5 Co-fractionation 22939629 9606 9606 BIOGRID
HCFC1 PPP1CA Co-fractionation 22939629 9606 9606 BIOGRID
HCFC1 PPP1CB Co-fractionation 22939629 9606 9606 BIOGRID
HCFC1 MAP3K7 Co-fractionation 22939629 9606 9606 BIOGRID
HCFC1 POU2F1 Affinity Capture-Western 10629049 9606 9606 BIOGRID
HCFC1 CREB3 Two-hybrid 9271389 9606 9606 BIOGRID
HCFC1 EEF1D Co-fractionation 22863883 9606 9606 BIOGRID
HCFC1 BAP1 Affinity Capture-Western 24211834 9606 9606 BIOGRID
HCFC1 SMARCB1 Negative Genetic 28481362 9606 9606 BIOGRID
HCFC1 RBBP7 Negative Genetic 28481362 9606 9606 BIOGRID
HCFC1 IKBKAP Positive Genetic 28481362 9606 9606 BIOGRID
HCFC1 SUZ12 Positive Genetic 28481362 9606 9606 BIOGRID
HCFC1 INO80C Positive Genetic 28481362 9606 9606 BIOGRID
HCFC1 RTF1 Positive Genetic 28481362 9606 9606 BIOGRID
HCFC1 PAF1 Positive Genetic 28481362 9606 9606 BIOGRID
HCFC1 MED15 Positive Genetic 28481362 9606 9606 BIOGRID
HCFC1 NR2C2 Affinity Capture-Western 30463901 9606 9606 BIOGRID
HCFC1 NCOR1 Affinity Capture-Western 30463901 9606 9606 BIOGRID
HCFC1 BAP1 Affinity Capture-Western 30463901 9606 9606 BIOGRID
HCFC1 PPIA Co-fractionation 31536960 9606 9606 BIOGRID
HCFC1 NFE2L1 Reconstituted Complex 29941490 9606 9606 BIOGRID
HCFC1 NYAP1 Proximity Label-MS 30021884 9606 9606 BIOGRID
HCFC1 SIAH1 Affinity Capture-Western 32479599 9606 9606 BIOGRID
HCFC1 CXXC1 Affinity Capture-MS 24981860 9606 9606 BIOGRID
HCFC1 CSRP2BP Affinity Capture-MS 24981860 9606 9606 BIOGRID
HCFC1 WDR82 Affinity Capture-MS 24981860 9606 9606 BIOGRID
HCFC1 ATN1 Affinity Capture-MS 24981860 9606 9606 BIOGRID
HCFC1 UL9 Two-hybrid 20133788 9606 10298 BIOGRID
HCFC1 UL30 Two-hybrid 20133788 9606 10298 BIOGRID
HCFC1 UL52 Two-hybrid 20133788 9606 10298 BIOGRID
HCFC1 UL9 Affinity Capture-Western 20133788 9606 10298 BIOGRID
HCFC1 UL30 Affinity Capture-Western 20133788 9606 10298 BIOGRID
HCFC1 UL52 Affinity Capture-Western 20133788 9606 10298 BIOGRID
HCFC1 UL48 Affinity Capture-Western 10629049 9606 10298 BIOGRID
 Annotation of HCFC1
 TCGA cancer survival map of HCFC1


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  HCFC1