TcoF overview
| TcoF: | HDAC8 | |
| GeneID: | 3006 | |
| Name: | Histone deacetylase | |
| Ensembl: | ENSG00000147099 | |
| Species: | Human | |
| Class: | class 2 | |
| Family: | Histone deacetylase | |
| Disease: | 6 | |
| Go term: | 23 | |
| Pathway: | 9 | |
| Hallmark: | 3 | |
| Super Enhancer: |
chrX:71838597-71855686 |
|
| Enhancer: |
chrX:71791950-71792500 chrX:71839160-71840570 chrX:71840750-71842950 chrX:71896000-71897390 chrX:71932780-71933650 chrX:72017940-72020010 chrX:72130740-72132740 chrX:71925090-71926090 chrX:71401680-71403960 chrX:71420970-71423200 chrX:71601440-71602410 chrX:71611740-71613440 chrX:71698730-71699140 chrX:71699280-71699760 chrX:71457500-71458690 chrX:71476940-71479160 chrX:71483820-71486270 chrX:71490030-71490810 chrX:71491080-71492450 chrX:71773390-71775400 chrX:71466790-71468100 chrX:72052140-72053620 chrX:72094790-72095100 chrX:72095170-72095460 chrX:71804150-71804480 chrX:71745920-71747950 chrX:71215990-71217750 chrX:71613740-71615630 chrX:71522780-71525150 chrX:71760200-71760600 |
|
| Promoter: |
chrX:71549366-71792951 |
ChIP-seq based regulatory details of HDAC8
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|---|---|---|---|---|---|
| TcoF_00_10059 | HDAC8 | cell line | K562 | - | Bone Marrow | ENCODE |
| TcoF_00_10109 | HDAC8 | cell line | K562 | - | Bone Marrow | ENCODE |
| TcoF_00_40531 | HDAC8 | cell line | K-562 | - | Bone Marrow | ReMap |
| TcoF_00_20706 | HDAC8 | cell line | K562 | - | Bone Marrow | Cistrome |
| TcoF_00_20065 | HDAC8 | cell line | K562 | GSM777640 | Bone Marrow | Cistrome |
| TcoF_00_40412 | HDAC8 | cell line | K-562 | GSM777640 | Bone Marrow | ReMap |
Downstream target genes of HDAC8
Upstream regulatory details of HDAC8
Protein-protein interaction of HDAC8
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| HDAC8 | RUNX1T1 | Affinity Capture-Western | 11533236 | 9606 | 9606 | BIOGRID |
| HDAC8 | CBFA2T3 | Affinity Capture-Western | 11533236 | 9606 | 9606 | BIOGRID |
| HDAC8 | CREB1 | Affinity Capture-Western | 19070599 | 9606 | 9606 | BIOGRID |
| HDAC8 | PPP1CC | Affinity Capture-Western | 19070599 | 9606 | 9606 | BIOGRID |
| HDAC8 | ESRRA | Biochemical Activity | 20484414 | 9606 | 9606 | BIOGRID |
| HDAC8 | HIST1H3A | Biochemical Activity | 10926844 | 9606 | 9606 | BIOGRID |
| HDAC8 | HIST1H4A | Biochemical Activity | 10926844 | 9606 | 9606 | BIOGRID |
| HDAC8 | HIST3H3 | Affinity Capture-Western | 21499270 | 9606 | 9606 | BIOGRID |
| HDAC8 | HIST4H4 | Affinity Capture-Western | 21499270 | 9606 | 9606 | BIOGRID |
| HDAC8 | HSPA4 | Affinity Capture-Western | 16809764 | 9606 | 9606 | BIOGRID |
| HDAC8 | HSP90AA1 | Affinity Capture-Western | 16809764 | 9606 | 9606 | BIOGRID |
| HDAC8 | STAG2 | Affinity Capture-MS | 23752268 | 9606 | 9606 | BIOGRID |
| HDAC8 | CHCHD3 | Affinity Capture-MS | 23752268 | 9606 | 9606 | BIOGRID |
| HDAC8 | CPNE3 | Affinity Capture-MS | 23752268 | 9606 | 9606 | BIOGRID |
| HDAC8 | ADD3 | Affinity Capture-MS | 23752268 | 9606 | 9606 | BIOGRID |
| HDAC8 | MME | Affinity Capture-MS | 23752268 | 9606 | 9606 | BIOGRID |
| HDAC8 | NUP98 | Affinity Capture-MS | 23752268 | 9606 | 9606 | BIOGRID |
| HDAC8 | MDM1 | Affinity Capture-MS | 23752268 | 9606 | 9606 | BIOGRID |
| HDAC8 | SEC16A | Affinity Capture-MS | 23752268 | 9606 | 9606 | BIOGRID |
| HDAC8 | CROCC | Affinity Capture-MS | 23752268 | 9606 | 9606 | BIOGRID |
| HDAC8 | SMC1A | Affinity Capture-MS | 23752268 | 9606 | 9606 | BIOGRID |
| HDAC8 | SMC3 | Affinity Capture-MS | 23752268 | 9606 | 9606 | BIOGRID |
| HDAC8 | SVIL | Affinity Capture-MS | 23752268 | 9606 | 9606 | BIOGRID |
| HDAC8 | TPM3 | Affinity Capture-MS | 23752268 | 9606 | 9606 | BIOGRID |
| HDAC8 | TPM4 | Affinity Capture-MS | 23752268 | 9606 | 9606 | BIOGRID |
| HDAC8 | ZSCAN2 | Affinity Capture-MS | 23752268 | 9606 | 9606 | BIOGRID |
| HDAC8 | VPRBP | Affinity Capture-Western | 26679995 | 9606 | 9606 | BIOGRID |
| HDAC8 | DDB1 | Affinity Capture-Western | 26679995 | 9606 | 9606 | BIOGRID |
| HDAC8 | TSC2 | Negative Genetic | 28319085 | 9606 | 9606 | BIOGRID |
| HDAC8 | TSC1 | Negative Genetic | 28319085 | 9606 | 9606 | BIOGRID |
| HDAC8 | TRAPPC11 | Negative Genetic | 28319085 | 9606 | 9606 | BIOGRID |
| HDAC8 | IGF2BP1 | Negative Genetic | 28319085 | 9606 | 9606 | BIOGRID |
| HDAC8 | SLC30A5 | Negative Genetic | 28319085 | 9606 | 9606 | BIOGRID |
| HDAC8 | TRAPPC2L | Negative Genetic | 28319085 | 9606 | 9606 | BIOGRID |
| HDAC8 | NPRL3 | Negative Genetic | 28319085 | 9606 | 9606 | BIOGRID |
| HDAC8 | VPS45 | Negative Genetic | 28319085 | 9606 | 9606 | BIOGRID |
| HDAC8 | RABGEF1 | Negative Genetic | 28319085 | 9606 | 9606 | BIOGRID |
| HDAC8 | TRAPPC12 | Positive Genetic | 28319085 | 9606 | 9606 | BIOGRID |
| HDAC8 | RAB1B | Positive Genetic | 28319085 | 9606 | 9606 | BIOGRID |
| HDAC8 | TBL1XR1 | Positive Genetic | 28319085 | 9606 | 9606 | BIOGRID |
| HDAC8 | SEC23B | Positive Genetic | 28319085 | 9606 | 9606 | BIOGRID |
| HDAC8 | VPS53 | Positive Genetic | 28319085 | 9606 | 9606 | BIOGRID |
| HDAC8 | SEC31A | Positive Genetic | 28319085 | 9606 | 9606 | BIOGRID |
| HDAC8 | TRAPPC5 | Positive Genetic | 28319085 | 9606 | 9606 | BIOGRID |
| HDAC8 | UBE2M | Positive Genetic | 28319085 | 9606 | 9606 | BIOGRID |
| HDAC8 | MOGS | Positive Genetic | 28319085 | 9606 | 9606 | BIOGRID |
Annotation of HDAC8
TCGA cancer survival map of HDAC8
Expression of HDAC8
Disease information of HDAC8