TcoF overview
TcoF: HMGN3
GeneID: 100130086
Name: High mobility group nucleosome-binding domain-containing protein 3
Ensembl: ENSG00000118418
Species: Human
Class: class 2
Family: Others
Disease: 0
Go term: 8
Pathway: --
Hallmark: --
Super Enhancer:

chr6:80005162-80024317

Enhancer:

chr6:79787630-79787740 chr6:79943640-79943770 chr6:79924730-79925430 chr6:80341220-80343360 chr6:80313940-80315240 chr6:79980880-79981970 chr6:79982530-79983360 chr6:79880270-79881510 chr6:79978950-79980820 chr6:79935080-79936220 chr6:79779610-79780450 chr6:79955910-79958000 chr6:80244960-80246830 chr6:80283370-80285370 chr6:79784860-79787160 chr6:80309320-80311580 chr6:80344590-80345470 chr6:79625200-79626920 chr6:80234990-80237060 chr6:79777370-79778850 chr6:79787440-79787570 chr6:79860980-79863230 chr6:80323320-80325440 chr6:80373120-80373700 chr6:79755140-79757330 chr6:79933370-79934150 chr6:79877530-79879910

Promoter:

chr6:79910962-79944455

 ChIP-seq based regulatory details of HMGN3
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
TcoF_00_20053 HMGN3 cell line K562 GSM935544 Bone Marrow Cistrome
 Downstream target genes of HMGN3
 Protein-protein interaction of HMGN3
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
HMGN3 ZC3H4 Proximity Label-MS 30021884 9606 9606 BIOGRID
HMGN3 CCDC185 Proximity Label-MS 30021884 9606 9606 BIOGRID
HMGN3 STUB1 Proximity Label-MS 30021884 9606 9606 BIOGRID
HMGN3 PRRC2C Proximity Label-MS 30021884 9606 9606 BIOGRID
HMGN3 AHCTF1 Proximity Label-MS 30021884 9606 9606 BIOGRID
HMGN3 HIST1H2BH Proximity Label-MS 30021884 9606 9606 BIOGRID
 Annotation of HMGN3
 TCGA cancer survival map of HMGN3


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  HMGN3