TcoF overview
| TcoF: | KDM1B | |
| GeneID: | 390245 | |
| Name: | Lysine-specific histone demethylase 1B | |
| Ensembl: | ENSG00000165097 | |
| Species: | Human | |
| Class: | NA | |
| Family: | Lysine demethylase | |
| Disease: | 0 | |
| Go term: | 22 | |
| Pathway: | 1 | |
| Hallmark: | -- | |
| Super Enhancer: |
chr6:18179054-18213054 chr6:18148292-18188310 chr6:18147456-18187018 |
|
| Enhancer: |
chr6:17987380-17987630 chr6:18264230-18264610 chr6:18276670-18278890 chr6:18148150-18149210 chr6:18171710-18173630 chr6:18186040-18188450 chr6:18184520-18186000 chr6:18279540-18281670 chr6:17984840-17987280 chr6:17875860-17878120 chr6:17904760-17905310 chr6:18215360-18217620 chr6:18361570-18363390 chr6:18432200-18433560 chr6:18433740-18435600 chr6:18488010-18489370 chr6:18491500-18492310 chr6:18493350-18494510 chr6:18495550-18495850 chr6:17907350-17908890 chr6:18496420-18498510 chr6:18214010-18215230 chr6:18302810-18303740 chr6:18294810-18295860 chr6:18284260-18285280 chr6:17908920-17909500 chr6:17927950-17929290 chr6:17929360-17929710 chr6:17929820-17931270 chr6:17931720-17933780 chr6:17933980-17934220 chr6:17964480-17966700 chr6:17967710-17968050 chr6:17968200-17969560 chr6:18226470-18228410 chr6:18241770-18244010 chr6:18343310-18345720 chr6:17983580-17984560 chr6:17938810-17941060 chr6:17971540-17973440 chr6:17980860-17982310 chr6:18015820-18017350 chr6:18027540-18029880 chr6:18047060-18048980 chr6:18052680-18055080 chr6:18055600-18057850 chr6:18146910-18148050 chr6:18341270-18341720 chr6:18350300-18351690 chr6:18409280-18411520 chr6:18500660-18503030 chr6:18022200-18024600 chr6:18160750-18161550 chr6:18161690-18162960 chr6:18042220-18044090 chr6:18051370-18052650 chr6:18245620-18246520 chr6:18293400-18294140 chr6:17601350-17602820 chr6:17850690-17852180 chr6:17878960-17880510 chr6:17937100-17937440 chr6:17973500-17974240 chr6:17974440-17976340 chr6:18119350-18120250 chr6:18325720-18326930 chr6:18346300-18348570 chr6:18349490-18350070 chr6:18421410-18423580 chr6:18424610-18426130 chr6:18457590-18459400 chr6:18515580-18516520 chr6:17579800-17581340 chr6:17913730-17914350 chr6:18394520-18396290 chr6:18399930-18402150 chr6:18115360-18116160 chr6:18584250-18586560 |
|
| Promoter: |
chr6:18155560-18224085 |
ChIP-seq based regulatory details of KDM1B
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|---|---|---|---|---|---|
| TcoF_00_21449 | KDM1B | cell line | HepG2 | GSM1442984 | Liver | Cistrome |
Downstream target genes of KDM1B
Upstream regulatory details of KDM1B
Protein-protein interaction of KDM1B
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| KDM1B | WHSC1L1 | Affinity Capture-MS | 20670891 | 9606 | 9606 | BIOGRID |
| KDM1B | EHMT2 | Affinity Capture-MS | 20670891 | 9606 | 9606 | BIOGRID |
| KDM1B | PAXIP1 | Affinity Capture-MS | 20670891 | 9606 | 9606 | BIOGRID |
| KDM1B | CCNT1 | Affinity Capture-MS | 20670891 | 9606 | 9606 | BIOGRID |
| KDM1B | WDR5 | Affinity Capture-MS | 20670891 | 9606 | 9606 | BIOGRID |
| KDM1B | DYNC1I2 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| KDM1B | BAP1 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| KDM1B | COX5A | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| KDM1B | CASC3 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| KDM1B | CPSF3 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| KDM1B | WHSC1L1 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| KDM1B | HEATR3 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| KDM1B | CEP192 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| KDM1B | ASXL2 | Affinity Capture-MS | 26496610 | 9606 | 9606 | BIOGRID |
| KDM1B | KDM1B | Biochemical Activity | 25773598 | 9606 | 9606 | BIOGRID |
| KDM1B | UBE2D3 | Reconstituted Complex | 25773598 | 9606 | 9606 | BIOGRID |
| KDM1B | OGT | Biochemical Activity | 25773598 | 9606 | 9606 | BIOGRID |
| KDM1B | OGT | Affinity Capture-Western | 25773598 | 9606 | 9606 | BIOGRID |
| KDM1B | HIST3H3 | Biochemical Activity | 25773598 | 9606 | 9606 | BIOGRID |
| KDM1B | HIST1H3A | Co-crystal Structure | 23266887 | 9606 | 9606 | BIOGRID |
Annotation of KDM1B
TCGA cancer survival map of KDM1B
Expression of KDM1B
Disease information of KDM1B