TcoF overview
| TcoF: | KDM5A | |
| GeneID: | 8284 | |
| Name: | Lysine-specific demethylase 5A | |
| Ensembl: | ENSG00000073614 | |
| Species: | Human | |
| Class: | NA | |
| Family: | Lysine demethylase | |
| Disease: | 4 | |
| Go term: | 26 | |
| Pathway: | 1 | |
| Hallmark: | -- | |
| Super Enhancer: |
-- |
|
| Enhancer: |
chr12:406370-407860 chr12:487720-489000 chr12:750190-752680 chr12:312910-313180 chr12:461490-462740 chr12:319740-321190 chr12:740150-741370 chr12:538410-539820 chr12:546370-547420 chr12:673850-674380 chr12:674570-675110 chr12:671060-673460 chr12:73380-75540 chr12:93980-95900 chr12:176600-178030 chr12:212080-214440 chr12:667830-668460 chr12:668590-670500 chr12:741410-741670 chr12:663150-664900 chr12:793100-794190 chr12:794200-796620 chr12:863490-865430 chr12:767070-769510 chr12:912860-914760 chr12:931760-933840 chr12:248520-249400 chr12:328370-329780 chr12:459950-461190 chr12:441670-442650 chr12:453290-453730 chr12:319210-319370 chr12:321280-322450 chr12:91520-93440 chr12:199320-200080 chr12:473300-474660 chr12:480370-482330 chr12:596900-599150 chr12:650100-652530 chr12:622210-623630 chr12:638610-641040 chr12:402340-402890 chr12:747810-750000 chr12:896480-897090 chr12:898030-899990 chr12:1114910-1117200 chr12:661330-661630 chr12:661700-662350 chr12:483820-484630 chr12:148000-148880 chr12:530280-530940 chr12:705970-708350 chr12:745700-746360 chr12:746780-747710 chr12:272080-272650 chr12:821140-823440 chr12:654640-655810 chr12:582130-584180 chr12:831390-832620 chr12:849560-850600 chr12:585130-586390 chr12:628880-629610 chr12:446170-446740 chr12:448710-449080 |
|
| Promoter: |
chr12:389223-498486 |
ChIP-seq based regulatory details of KDM5A
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|---|---|---|---|---|---|
| TcoF_00_40168 | KDM5A | cell line | A-549 | - | Lung | ReMap |
| TcoF_00_40084 | KDM5A | cell line | WA01 | - | None | ReMap |
| TcoF_00_30689 | KDM5A | cell line | hESC H1 | GSM1003446 | Embryo | ChIP-Atlas |
| TcoF_00_40007 | KDM5A | cell line | WA01 | GSM1003446 | None | ReMap |
| TcoF_00_30665 | KDM5A | cell line | T-47D | GSM2131193 | Breast | ChIP-Atlas |
| TcoF_00_40306 | KDM5A | cell line | T-47D_DMSO | GSM2131193 | Breast | ReMap |
| TcoF_00_30666 | KDM5A | cell line | T-47D | GSM2131194 | Breast | ChIP-Atlas |
| TcoF_00_40307 | KDM5A | cell line | T-47D_MK2206 | GSM2131194 | Breast | ReMap |
| TcoF_00_30553 | KDM5A | cell line | hESC H1 | GSM831031 | Embryo | ChIP-Atlas |
| TcoF_00_30554 | KDM5A | cell line | hESC H1 | GSM831032 | Embryo | ChIP-Atlas |
Downstream target genes of KDM5A
Upstream regulatory details of KDM5A
Protein-protein interaction of KDM5A
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| KDM5A | LMO2 | Reconstituted Complex | 9129143 | 9606 | 9606 | BIOGRID |
| KDM5A | RB1 | Affinity Capture-Western | 7935440 | 9606 | 9606 | BIOGRID |
| KDM5A | HIST2H3A | Reconstituted Complex | 17320161 | 9606 | 9606 | BIOGRID |
| KDM5A | EZH2 | Affinity Capture-Western | 18483221 | 9606 | 9606 | BIOGRID |
| KDM5A | EED | Affinity Capture-Western | 18483221 | 9606 | 9606 | BIOGRID |
| KDM5A | MORF4L1 | Affinity Capture-Western | 17573780 | 9606 | 9606 | BIOGRID |
| KDM5A | SIN3B | Affinity Capture-Western | 17573780 | 9606 | 9606 | BIOGRID |
| KDM5A | HDAC2 | Affinity Capture-Western | 17573780 | 9606 | 9606 | BIOGRID |
| KDM5A | RBPJ | Affinity Capture-Western | 20231316 | 9606 | 9606 | BIOGRID |
| KDM5A | RB1 | Two-hybrid | 15949438 | 9606 | 9606 | BIOGRID |
| KDM5A | RB1 | Affinity Capture-Western | 15949438 | 9606 | 9606 | BIOGRID |
| KDM5A | C11orf30 | Affinity Capture-Western | 26841866 | 9606 | 9606 | BIOGRID |
| KDM5A | GATAD1 | Affinity Capture-Western | 26841866 | 9606 | 9606 | BIOGRID |
| KDM5A | ZNF131 | Affinity Capture-Western | 26841866 | 9606 | 9606 | BIOGRID |
| KDM5A | NSD1 | Negative Genetic | 26864203 | 9606 | 9606 | BIOGRID |
| KDM5A | GATAD1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| KDM5A | PHF12 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| KDM5A | C11orf30 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| KDM5A | MORF4L1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| KDM5A | SIN3B | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| KDM5A | MORF4L2 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| KDM5A | RBBP7 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| KDM5A | CHCHD2 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| KDM5A | TUBA1B | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| KDM5A | ZMYND8 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| KDM5A | MYCBP | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| KDM5A | HDAC2 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| KDM5A | PALB2 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| KDM5A | BRD8 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| KDM5A | MRGBP | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
Annotation of KDM5A
TCGA cancer survival map of KDM5A
Expression of KDM5A
Disease information of KDM5A