TcoF: | KDM5B | |
GeneID: | 7403 | |
Name: | Lysine-specific demethylase 5B | |
Ensembl: | ENSG00000117139 | |
Species: | Human | |
Class: | NA | |
Family: | Lysine demethylase | |
Disease: | 3 | |
Go term: | 31 | |
Pathway: | 1 | |
Hallmark: | -- | |
Super Enhancer: |
chr1:202774940-202781425 chr1:202769622-202814205 chr1:202774913-202807500 chr1:202774000-202808972 chr1:202774937-202822335 chr1:202749934-202781880 chr1:202774978-202791100 chr1:202764740-202781330 chr1:202773052-202781084 chr1:202773051-202778007 chr1:202772589-202791614 |
|
Enhancer: |
chr1:203113490-203114440 chr1:203115840-203118260 chr1:203122160-203124140 chr1:202557700-202559720 chr1:202887520-202888880 chr1:202889040-202889980 chr1:202894340-202896220 chr1:202936030-202936310 chr1:202957730-202959390 chr1:203026080-203028300 chr1:202536950-202538270 chr1:202933820-202934490 chr1:202956790-202957570 chr1:203044890-203045460 chr1:203186500-203186860 chr1:202709940-202710490 chr1:202951890-202953840 chr1:202718270-202719780 chr1:202364610-202365680 chr1:202677940-202679380 chr1:203086260-203088260 chr1:203098310-203100180 chr1:202774440-202775070 chr1:203021010-203022880 chr1:203097060-203097400 chr1:203141170-203143550 chr1:202782550-202784380 chr1:202934630-202935010 chr1:202935730-202935870 chr1:203124300-203126120 chr1:202568480-202569480 chr1:202567030-202568340 chr1:202709060-202709800 chr1:203053160-203053770 chr1:203097560-203097910 chr1:203155470-203155720 chr1:203023090-203024550 chr1:203025640-203025910 chr1:203053860-203054610 chr1:203151980-203152760 chr1:203154510-203155440 chr1:202425410-202426520 chr1:202473820-202475730 chr1:202770460-202770630 chr1:202771990-202773010 chr1:203121400-203122100 chr1:203166340-203167830 chr1:202249980-202251910 chr1:202252280-202253520 chr1:202260980-202262160 chr1:202263530-202265900 chr1:202318270-202319970 chr1:202320460-202321250 chr1:202366840-202367980 chr1:202378980-202381400 chr1:203102440-203103700 chr1:203171350-203172600 chr1:202308580-202311020 chr1:202375000-202377380 chr1:202802670-202804010 chr1:202813520-202815050 chr1:202935120-202935650 chr1:203036920-203037580 chr1:201924680-201926410 chr1:201979950-201980250 chr1:201980430-201981080 chr1:201981310-201981470 chr1:201982160-201982300 chr1:201982430-201982950 chr1:201983150-201984330 chr1:201986320-201988780 chr1:202000300-202000950 chr1:202002820-202005290 chr1:202005880-202006540 chr1:202006640-202008850 chr1:202009180-202011360 chr1:202012390-202012900 chr1:202433060-202434220 chr1:202434260-202436330 chr1:201997740-202000060 chr1:201981890-201982070 chr1:202913070-202914110 chr1:202949400-202951580 chr1:202921280-202923100 chr1:202923440-202924660 chr1:202925050-202927040 chr1:202932860-202933730 chr1:202712170-202713540 chr1:202719910-202722030 chr1:202253840-202254150 chr1:202452200-202453740 chr1:202500590-202501960 chr1:202691920-202693380 chr1:202499320-202500380 chr1:202502460-202502970 chr1:203183180-203185200 chr1:202758760-202759100 chr1:203109290-203111320 chr1:203030800-203032950 chr1:203136530-203136930 chr1:203137220-203137750 chr1:203137800-203138030 chr1:203138220-203138380 chr1:203139580-203140180 chr1:203140710-203141070 chr1:203143730-203144450 chr1:203144590-203144670 chr1:203192790-203194170 chr1:203256960-203257110 chr1:203194230-203194790 chr1:202483150-202485300 |
|
Promoter: |
chr1:202693623-202778598 |
Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
---|---|---|---|---|---|---|
TcoF_00_30690 | KDM5B | cell line | hESC H1 | GSM1003457 | Embryo | ChIP-Atlas |
TcoF_00_30714 | KDM5B | cell line | K-562 | GSM1003586 | Bone Marrow | ChIP-Atlas |
TcoF_00_40002 | KDM5B | cell line | K-562 | GSM1003586 | Bone Marrow | ReMap |
TcoF_00_30861 | KDM5B | cell line | MCF-7 | GSM1122651 | Breast | ChIP-Atlas |
TcoF_00_40261 | KDM5B | cell line | MCF-7 | GSM1122651 | Breast | ReMap |
TcoF_00_30862 | KDM5B | cell line | MCF-7 | GSM1122652 | Breast | ChIP-Atlas |
TcoF_00_30863 | KDM5B | cell line | MCF-7 | GSM1122653 | Breast | ChIP-Atlas |
TcoF_00_30864 | KDM5B | cell line | T-47D | GSM1122659 | Breast | ChIP-Atlas |
TcoF_00_40266 | KDM5B | cell line | T-47D | GSM1122659 | Breast | ReMap |
TcoF_00_30865 | KDM5B | cell line | SUM 185PE | GSM1122661 | Breast | ChIP-Atlas |
TcoF_00_40264 | KDM5B | cell line | SUM185 | GSM1122661 | None | ReMap |
TcoF_00_30866 | KDM5B | cell line | SUM 185PE | GSM1122662 | Breast | ChIP-Atlas |
TcoF_00_40265 | KDM5B | cell line | SUM185_SHCTCF | GSM1122662 | None | ReMap |
TcoF_00_30867 | KDM5B | cell line | SUM 159PT | GSM1122664 | Breast | ChIP-Atlas |
TcoF_00_40263 | KDM5B | cell line | SUM159 | GSM1122664 | Breast | ReMap |
TcoF_00_30868 | KDM5B | cell line | MDA-MB-231 | GSM1122669 | Breast | ChIP-Atlas |
TcoF_00_40262 | KDM5B | cell line | MDA-MB-231 | GSM1122669 | Breast | ReMap |
TcoF_00_30869 | KDM5B | cell line | HCC2157 | GSM1122671 | Breast | ChIP-Atlas |
TcoF_00_40260 | KDM5B | cell line | HCC2157 | GSM1122671 | Breast | ReMap |
TcoF_00_40025 | KDM5B | cell line | WA01 | GSM2698661/GSM2698662 | None | ReMap |
TcoF_00_30976 | KDM5B | cell line | MCF-7 | GSM2813075 | Breast | ChIP-Atlas |
TcoF_00_30977 | KDM5B | cell line | C49R | GSM2813077 | Breast | ChIP-Atlas |
TcoF_00_30978 | KDM5B | cell line | C70R | GSM2813079 | Breast | ChIP-Atlas |
TcoF_00_30979 | KDM5B | cell line | FULR | GSM2813090 | Breast | ChIP-Atlas |
TcoF_00_30980 | KDM5B | cell line | MCF-7 | GSM2813092 | Breast | ChIP-Atlas |
TcoF_00_30981 | KDM5B | cell line | MCF-7 | GSM2813094 | Breast | ChIP-Atlas |
TcoF_00_30982 | KDM5B | cell line | MCF-7 | GSM2813096 | Breast | ChIP-Atlas |
TcoF_00_30983 | KDM5B | cell line | MCF-7 | GSM2813098 | Breast | ChIP-Atlas |
TcoF_00_30984 | KDM5B | cell line | TAMR | GSM2813100 | Breast | ChIP-Atlas |
TcoF_00_30985 | KDM5B | cell line | C70R | GSM2813102 | Breast | ChIP-Atlas |
TcoF_00_30986 | KDM5B | cell line | C70R | GSM2813103 | Breast | ChIP-Atlas |
TcoF_00_30987 | KDM5B | cell line | FULR | GSM2813105 | Breast | ChIP-Atlas |
TcoF_00_30988 | KDM5B | cell line | FULR | GSM2813106 | Breast | ChIP-Atlas |
TcoF_00_30989 | KDM5B | cell line | MCF-7 | GSM2813108 | Breast | ChIP-Atlas |
TcoF_00_30990 | KDM5B | cell line | MCF-7 | GSM2813109 | Breast | ChIP-Atlas |
TcoF_00_30991 | KDM5B | cell line | TAMR | GSM2813111 | Breast | ChIP-Atlas |
TcoF_00_30992 | KDM5B | cell line | TAMR | GSM2813112 | Breast | ChIP-Atlas |
TcoF_00_30993 | KDM5B | cell line | FULR | GSM2813118 | Breast | ChIP-Atlas |
TcoF_00_30994 | KDM5B | cell line | FULR | GSM2813119 | Breast | ChIP-Atlas |
TcoF_00_30995 | KDM5B | cell line | FULR | GSM2813120 | Breast | ChIP-Atlas |
TcoF_00_30996 | KDM5B | cell line | FULR | GSM2813122 | Breast | ChIP-Atlas |
TcoF_00_30997 | KDM5B | cell line | MCF-7 | GSM2813124 | Breast | ChIP-Atlas |
TcoF_00_30998 | KDM5B | cell line | MCF-7 | GSM2813125 | Breast | ChIP-Atlas |
TcoF_00_30999 | KDM5B | cell line | C70R | GSM2813127 | Breast | ChIP-Atlas |
TcoF_00_31000 | KDM5B | cell line | C70R | GSM2813128 | Breast | ChIP-Atlas |
TcoF_00_30399 | KDM5B | cell line | U-937 | GSM700536 | Blood | ChIP-Atlas |
TcoF_00_30400 | KDM5B | cell line | U-937 | GSM700537 | Blood | ChIP-Atlas |
TcoF_00_30401 | KDM5B | cell line | U-937 | GSM700538 | Blood | ChIP-Atlas |
TcoF_00_30402 | KDM5B | cell line | U-937 | GSM700539 | Blood | ChIP-Atlas |
TcoF_00_30403 | KDM5B | cell line | MCF-7 | GSM700754 | Breast | ChIP-Atlas |
TcoF_00_30404 | KDM5B | cell line | MCF-7 | GSM700755 | Breast | ChIP-Atlas |
TcoF_00_30405 | KDM5B | cell line | MCF-7 | GSM700756 | Breast | ChIP-Atlas |
TcoF_00_30406 | KDM5B | cell line | MCF-7 | GSM700757 | Breast | ChIP-Atlas |
TcoF_00_30407 | KDM5B | cell line | MCF-7 | GSM700758 | Breast | ChIP-Atlas |
TcoF_00_30542 | KDM5B | cell line | K-562 | GSM831000 | Bone Marrow | ChIP-Atlas |
TcoF_00_30546 | KDM5B | cell line | K-562 | GSM831010 | Bone Marrow | ChIP-Atlas |
TcoF_00_30547 | KDM5B | cell line | K-562 | GSM831011 | Bone Marrow | ChIP-Atlas |
TcoF_00_30555 | KDM5B | cell line | hESC H1 | GSM831033 | Embryo | ChIP-Atlas |
TcoF_00_30556 | KDM5B | cell line | hESC H1 | GSM831034 | Embryo | ChIP-Atlas |
OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
---|---|---|---|---|---|---|
KDM5B | FOXG1 | Two-hybrid | 12657635 | 9606 | 9606 | BIOGRID |
KDM5B | PAX9 | Two-hybrid | 12657635 | 9606 | 9606 | BIOGRID |
KDM5B | PAX9 | Affinity Capture-Western | 12657635 | 9606 | 9606 | BIOGRID |
KDM5B | FOXG1 | Affinity Capture-Western | 12657635 | 9606 | 9606 | BIOGRID |
KDM5B | CACNA1H | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | CDC20 | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | PCNX | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | SMARCC2 | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | DGKQ | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | CACNA1A | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | NR4A3 | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | BMP2K | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | VGLL3 | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | CDX2 | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | CBX4 | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | SLITRK3 | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | AXIN2 | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | FOXC2 | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | ONECUT2 | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | MAF | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | ELF4 | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | SLC39A6 | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | BRD4 | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | RNF43 | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | RBM15B | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | PRDM13 | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | GTF2A1 | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | DBNL | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | CECR6 | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | RHOBTB2 | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | TAF2 | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | SHOX2 | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | ARID1B | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | HOXA1 | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | GRIN2B | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | MEOX2 | Affinity Capture-MS | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | CBX4 | Affinity Capture-Western | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | CBX4 | Reconstituted Complex | 19336002 | 9606 | 9606 | BIOGRID |
KDM5B | RB1 | Affinity Capture-Western | 16645588 | 9606 | 9606 | BIOGRID |
KDM5B | AR | Affinity Capture-Western | 18048344 | 9606 | 9606 | BIOGRID |
KDM5B | FOXG1 | Affinity Capture-Western | 17973255 | 9606 | 9606 | BIOGRID |
KDM5B | PAX9 | Affinity Capture-Western | 17973255 | 9606 | 9606 | BIOGRID |
KDM5B | LMO2 | Affinity Capture-Western | 17973255 | 9606 | 9606 | BIOGRID |
KDM5B | KLF10 | Reconstituted Complex | 20863814 | 9606 | 9606 | BIOGRID |
KDM5B | KLF10 | Affinity Capture-Western | 20863814 | 9606 | 9606 | BIOGRID |
KDM5B | HDAC1 | Affinity Capture-Western | 21502505 | 9606 | 9606 | BIOGRID |
KDM5B | RB1 | Affinity Capture-Western | 21980403 | 9606 | 9606 | BIOGRID |
KDM5B | CHD3 | Affinity Capture-Western | 21937684 | 9606 | 9606 | BIOGRID |
KDM5B | KDM1A | Affinity Capture-Western | 21937684 | 9606 | 9606 | BIOGRID |
KDM5B | MTA2 | Affinity Capture-Western | 21937684 | 9606 | 9606 | BIOGRID |
KDM5B | MTA3 | Affinity Capture-Western | 21937684 | 9606 | 9606 | BIOGRID |
KDM5B | HDAC1 | Affinity Capture-Western | 21937684 | 9606 | 9606 | BIOGRID |
KDM5B | HDAC2 | Affinity Capture-Western | 21937684 | 9606 | 9606 | BIOGRID |
KDM5B | RBBP7 | Affinity Capture-Western | 21937684 | 9606 | 9606 | BIOGRID |
KDM5B | RBBP4 | Affinity Capture-Western | 21937684 | 9606 | 9606 | BIOGRID |
KDM5B | MBD2 | Affinity Capture-Western | 21937684 | 9606 | 9606 | BIOGRID |
KDM5B | MBD3 | Affinity Capture-Western | 21937684 | 9606 | 9606 | BIOGRID |
KDM5B | KDM1A | Reconstituted Complex | 21937684 | 9606 | 9606 | BIOGRID |
KDM5B | MBD3 | Reconstituted Complex | 21937684 | 9606 | 9606 | BIOGRID |
KDM5B | HDAC1 | Reconstituted Complex | 21937684 | 9606 | 9606 | BIOGRID |
KDM5B | PAX9 | Affinity Capture-Western | 17373667 | 9606 | 9606 | BIOGRID |
KDM5B | HDAC1 | Affinity Capture-Western | 17373667 | 9606 | 9606 | BIOGRID |
KDM5B | HDAC4 | Affinity Capture-Western | 17373667 | 9606 | 9606 | BIOGRID |
KDM5B | HDAC5 | Affinity Capture-Western | 17373667 | 9606 | 9606 | BIOGRID |
KDM5B | HDAC7 | Affinity Capture-Western | 17373667 | 9606 | 9606 | BIOGRID |
KDM5B | MYC | Affinity Capture-Western | 22371483 | 9606 | 9606 | BIOGRID |
KDM5B | TFAP2C | Affinity Capture-Western | 22371483 | 9606 | 9606 | BIOGRID |
KDM5B | CDX2 | Affinity Capture-Western | 23202735 | 9606 | 9606 | BIOGRID |
KDM5B | CBX4 | Affinity Capture-Western | 23970103 | 9606 | 9606 | BIOGRID |
KDM5B | KMT2A | Negative Genetic | 26864203 | 9606 | 9606 | BIOGRID |
KDM5B | DHX37 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
KDM5B | PROSC | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
KDM5B | KDM4A | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
KDM5B | CHTOP | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |