TcoF overview
| TcoF: | LITAF | |
| GeneID: | 6300 | |
| Name: | Lipopolysaccharide-induced tumor necrosis factor-alpha factor | |
| Ensembl: | ENSG00000189067 | |
| Species: | Human | |
| Class: | class 2 | |
| Family: | zf-LITAF-like | |
| Disease: | 3 | |
| Go term: | 22 | |
| Pathway: | -- | |
| Hallmark: | -- | |
| Super Enhancer: |
chr16:11690817-11710282 chr16:11691081-11703487 chr16:11670363-11735650 chr16:11649075-11691761 chr16:11649589-11682175 chr16:11650013-11681984 chr16:11677428-11735773 chr16:11668949-11735575 chr16:11677373-11735413 chr16:11677084-11735404 chr16:11677869-11735472 chr16:11650133-11682187 chr16:11676599-11735555 chr16:11670407-11735957 chr16:11676290-11735721 chr16:11640126-11736014 chr16:11639972-11736262 chr16:11639994-11735808 chr16:11643443-11735716 chr16:11644469-11735706 chr16:11674016-11735866 chr16:11676106-11717045 chr16:11636074-11735989 chr16:11677036-11735807 chr16:11638772-11736151 chr16:11677419-11709495 chr16:11668652-11681764 chr16:11642199-11678846 chr16:11645108-11691261 chr16:11649793-11678829 chr16:11648024-11691646 chr16:11674718-11735684 chr16:11675506-11735851 chr16:11676629-11735622 chr16:11677704-11735726 chr16:11665083-11735784 chr16:11669289-11735749 chr16:11677395-11735670 chr16:11665859-11735641 chr16:11653982-11692138 chr16:11670369-11735548 chr16:11650194-11665789 chr16:11650394-11692429 chr16:11674395-11737195 chr16:11676432-11708509 chr16:11669151-11691644 chr16:11676646-11735479 chr16:11676646-11710182 chr16:11645886-11692156 chr16:11627480-11681799 chr16:11627515-11680849 chr16:11627473-11659177 chr16:11677431-11717050 chr16:11677623-11735411 chr16:11677635-11724601 chr16:11678087-11735394 chr16:11677659-11735639 chr16:11677614-11700208 chr16:11678191-11735518 chr16:11706301-11724521 chr16:11690661-11735646 chr16:11706076-11735916 chr16:11701915-11736017 chr16:11690632-11735409 chr16:11690633-11735512 chr16:11691259-11736038 chr16:11703247-11735638 chr16:11589057-11591674 chr16:11705475-11736010 chr16:11697649-11727326 chr16:11588314-11616268 chr16:11706455-11735478 chr16:11705732-11735718 chr16:11690645-11735874 chr16:11690619-11735909 chr16:11696860-11735651 chr16:11693898-11735653 chr16:11705467-11737186 chr16:11705536-11724830 chr16:11705609-11724647 chr16:11705702-11735549 |
|
| Enhancer: |
chr16:11702860-11704890 chr16:11644260-11645560 chr16:11792180-11794300 chr16:11850230-11852280 chr16:11914160-11915490 chr16:11944280-11945260 chr16:11647550-11649310 chr16:11862360-11862880 chr16:11862950-11864630 chr16:11766270-11767180 chr16:11767670-11769830 chr16:11888900-11890970 chr16:11833950-11836330 chr16:11645660-11647120 chr16:11875320-11876140 chr16:11457790-11459590 chr16:11879060-11879370 chr16:11879690-11880610 chr16:11781820-11782150 chr16:11827940-11829870 chr16:11268620-11270680 chr16:11403450-11405460 chr16:11669070-11669880 chr16:11670430-11671170 chr16:11799520-11800940 chr16:11832140-11833820 chr16:12060200-12061420 chr16:12070670-12073080 chr16:12129140-12129490 chr16:11876240-11878650 chr16:11472300-11474480 chr16:11667670-11668900 chr16:11717800-11720100 chr16:11801080-11803280 chr16:11880750-11881480 chr16:12083210-12084180 chr16:12129860-12132200 chr16:11902970-11905350 chr16:11976950-11979030 chr16:11867060-11868090 chr16:11941660-11944130 chr16:11085070-11087560 chr16:11125660-11128130 chr16:11128220-11129220 chr16:11149650-11150900 chr16:11150940-11151420 chr16:11439620-11441560 chr16:11442000-11444490 chr16:11452970-11453950 chr16:11639620-11641570 chr16:11990640-11991690 chr16:12006730-12009220 chr16:12110160-12110660 chr16:12150060-12151620 chr16:12206820-12208490 chr16:12263810-12265940 chr16:12271010-12271440 chr16:12271590-12272850 chr16:11138730-11141140 chr16:11623130-11625170 chr16:11629330-11629600 chr16:11918600-11920980 chr16:12135160-12135790 chr16:11596960-11597960 chr16:11721590-11722490 chr16:11722820-11724730 chr16:12120190-12121170 chr16:11960200-11961980 chr16:12124090-12125290 chr16:11873460-11875280 chr16:12095320-12096840 chr16:11975420-11976870 chr16:11523700-11524060 chr16:11588880-11590040 chr16:11593140-11593800 chr16:11594520-11596440 chr16:11957660-11958960 chr16:12181340-12182920 chr16:12351610-12352500 chr16:12355900-12357460 chr16:12408860-12410180 chr16:12410870-12411640 chr16:12172770-12175120 chr16:11896250-11898040 chr16:12096900-12098910 chr16:11779540-11780150 chr16:11284350-11285120 chr16:11482930-11483200 chr16:12154030-12155380 chr16:11104110-11106220 chr16:11110000-11111960 chr16:11132180-11133610 chr16:11169600-11171070 chr16:11177190-11179660 chr16:11186810-11189260 chr16:11292400-11293820 chr16:11302000-11304080 chr16:11665730-11667500 chr16:11701650-11702550 chr16:11906770-11909190 chr16:11304890-11307300 chr16:11665310-11665680 chr16:11505510-11507440 chr16:11650710-11652740 chr16:11886220-11888300 chr16:12193150-12194190 chr16:12091110-12093150 chr16:11101790-11102850 chr16:11125060-11125340 chr16:11276050-11278540 chr16:11384280-11386490 chr16:11447970-11450220 chr16:11157000-11157870 chr16:11712780-11714380 chr16:12086200-12086770 chr16:12103360-12104530 chr16:12104560-12105010 chr16:11658380-11660600 chr16:12132220-12133070 chr16:11240430-11241790 chr16:11242090-11243520 chr16:11427400-11428190 chr16:11711880-11712640 chr16:11884630-11886110 |
|
| Promoter: |
chr16:11641578-11730237 |
ChIP-seq based regulatory details of LITAF
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|
Downstream target genes of LITAF
Upstream regulatory details of LITAF
Protein-protein interaction of LITAF
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| LITAF | NEDD4 | Affinity Capture-Western | 16118794 | 9606 | 9606 | BIOGRID |
| LITAF | TSG101 | Affinity Capture-Western | 16118794 | 9606 | 9606 | BIOGRID |
| LITAF | STAT6 | Two-hybrid | 15793005 | 9606 | 9606 | BIOGRID |
| LITAF | BAG3 | Two-hybrid | 25416956 | 9606 | 9606 | BIOGRID |
| LITAF | CALCOCO2 | Two-hybrid | 25416956 | 9606 | 9606 | BIOGRID |
| LITAF | STAM2 | Two-hybrid | 25416956 | 9606 | 9606 | BIOGRID |
| LITAF | UBQLN1 | Two-hybrid | 25416956 | 9606 | 9606 | BIOGRID |
| LITAF | REEP6 | Two-hybrid | 25416956 | 9606 | 9606 | BIOGRID |
| LITAF | TSG101 | Affinity Capture-Western | 25963657 | 9606 | 9606 | BIOGRID |
| LITAF | NEDD4 | Affinity Capture-Western | 25963657 | 9606 | 9606 | BIOGRID |
| LITAF | NEDD4L | Affinity Capture-Western | 25963657 | 9606 | 9606 | BIOGRID |
| LITAF | ITCH | Affinity Capture-Western | 25963657 | 9606 | 9606 | BIOGRID |
| LITAF | WWP1 | Affinity Capture-Western | 25963657 | 9606 | 9606 | BIOGRID |
| LITAF | WWP2 | Affinity Capture-Western | 25963657 | 9606 | 9606 | BIOGRID |
| LITAF | TOM1 | Affinity Capture-Western | 25963657 | 9606 | 9606 | BIOGRID |
| LITAF | TAB2 | Affinity Capture-Western | 25963657 | 9606 | 9606 | BIOGRID |
| LITAF | CALCOCO2 | Two-hybrid | 25910212 | 9606 | 9606 | BIOGRID |
| LITAF | HGS | Two-hybrid | 25910212 | 9606 | 9606 | BIOGRID |
| LITAF | OPTN | Two-hybrid | 25910212 | 9606 | 9606 | BIOGRID |
| LITAF | REEP6 | Two-hybrid | 25910212 | 9606 | 9606 | BIOGRID |
| LITAF | STAM2 | Two-hybrid | 25910212 | 9606 | 9606 | BIOGRID |
| LITAF | UBQLN1 | Two-hybrid | 25910212 | 9606 | 9606 | BIOGRID |
| LITAF | R3HDM1 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| LITAF | HPCAL4 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| LITAF | CYHR1 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| LITAF | BCS1L | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| LITAF | UBB | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| LITAF | PUM2 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| LITAF | FGFR2 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| LITAF | PTPRD | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| LITAF | LRP10 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| LITAF | APOB | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| LITAF | REEP5 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| LITAF | RASSF3 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| LITAF | FGFR1 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| LITAF | HECW2 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| LITAF | CD320 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| LITAF | NEDD4L | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| LITAF | PUM1 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| LITAF | BMPR1A | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| LITAF | CARS | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| LITAF | RNF149 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| LITAF | TTC33 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| LITAF | NEDD4 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| LITAF | ARL8A | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| LITAF | ACOX1 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| LITAF | SDCBP | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| LITAF | ARID5A | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| LITAF | RNF208 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| LITAF | UBA52 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| LITAF | CACNB3 | Affinity Capture-Western | 31462068 | 9606 | 9606 | BIOGRID |
| LITAF | CACNA1C | Affinity Capture-Western | 31462068 | 9606 | 9606 | BIOGRID |
| LITAF | CDIP1 | Synthetic Rescue | 32544461 | 9606 | 9606 | BIOGRID |
Annotation of LITAF
TCGA cancer survival map of LITAF
Expression of LITAF
Disease information of LITAF