TcoF overview
TcoF: PHF1
GeneID: 5586
Name: PHD finger protein 1
Ensembl: ENSG00000112511
Species: Human
Class: class 2
Family: PHF
Disease: 0
Go term: 15
Pathway: 1
Hallmark: --
Super Enhancer:

chr6:33376951-33387121

Enhancer:

chr6:33266430-33266640 chr6:33278690-33280990 chr6:33281260-33281470 chr6:33281640-33281780 chr6:33359780-33361800 chr6:33391380-33393570 chr6:33176420-33176540 chr6:33217430-33217560 chr6:33264890-33266230 chr6:33422550-33422800 chr6:33217670-33218040 chr6:33553500-33553880 chr6:33661480-33662700 chr6:33473350-33474180 chr6:32806020-32806420 chr6:32976040-32977230 chr6:33150580-33151920 chr6:33378990-33380020 chr6:33400030-33400460 chr6:33412400-33414350 chr6:33543710-33545310 chr6:33545410-33546480 chr6:32918580-32920720 chr6:32940910-32942230 chr6:33176680-33177400 chr6:33297960-33299580 chr6:33664350-33664530 chr6:33668290-33669120 chr6:33691200-33693210 chr6:33247150-33247270 chr6:33247390-33247540 chr6:33247640-33248200 chr6:33083940-33084730 chr6:33085000-33087240 chr6:33180500-33182440 chr6:33677250-33679330 chr6:33046460-33048440 chr6:33783450-33784060 chr6:33455380-33456650 chr6:33500890-33502540 chr6:33553140-33553360 chr6:33651180-33651790 chr6:33660670-33661320 chr6:33507990-33509760 chr6:33140420-33140830 chr6:33029110-33031380 chr6:33400580-33401110 chr6:33194220-33196320 chr6:33248300-33248450 chr6:33632990-33633610 chr6:33633750-33634900 chr6:33636410-33636750 chr6:33636930-33638100 chr6:33639080-33639800 chr6:33640010-33641360 chr6:33662860-33663480 chr6:33735920-33737340 chr6:33737580-33738980 chr6:33740560-33740980 chr6:33752200-33754510 chr6:33537870-33540320 chr6:33344780-33345400 chr6:33707040-33709350 chr6:33128100-33130460 chr6:33524520-33525640 chr6:33559970-33560770 chr6:32805430-32805510 chr6:32862800-32865180 chr6:32873660-32874960 chr6:32942540-32942790 chr6:32942890-32943160 chr6:33264550-33264800 chr6:33322820-33323860 chr6:33323970-33324560 chr6:33556310-33556680 chr6:33595030-33596940 chr6:33605560-33608000 chr6:33696080-33698460 chr6:33698940-33701330 chr6:33850810-33852510 chr6:33852740-33855220 chr6:32783090-32784630 chr6:33331800-33333680 chr6:33334820-33335860 chr6:33382320-33382500 chr6:33407550-33408500 chr6:33408740-33408940 chr6:33452860-33453340 chr6:33459890-33460210 chr6:33638590-33638940 chr6:33406700-33407410 chr6:33124400-33125220 chr6:33328250-33328490 chr6:33380200-33380280 chr6:33380370-33380470 chr6:33380570-33380970 chr6:33515010-33516350 chr6:33746160-33747870 chr6:33762610-33763270 chr6:33795090-33797100 chr6:33918400-33919520 chr6:33982190-33984300 chr6:34021130-34021480 chr6:33672020-33673890 chr6:33246600-33246870 chr6:33262540-33262680 chr6:33264100-33264190 chr6:33264240-33264370 chr6:33381070-33381180 chr6:33381610-33381810 chr6:33381890-33382010 chr6:33382610-33382730 chr6:32944240-32944330 chr6:33248760-33250680 chr6:33263540-33263800 chr6:33381340-33381510

Promoter:

chr6:33378176-33384230

 ChIP-seq based regulatory details of PHF1
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
 Downstream target genes of PHF1
 Protein-protein interaction of PHF1
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
PHF1 RBPMS Two-hybrid 16189514 9606 9606 BIOGRID
PHF1 THAP1 Two-hybrid 16189514 9606 9606 BIOGRID
PHF1 EZH2 Two-hybrid 11571280 9606 9606 BIOGRID
PHF1 HIST1H3A Reconstituted Complex 21167174 9606 9606 BIOGRID
PHF1 HIST1H3C Reconstituted Complex 21167174 9606 9606 BIOGRID
PHF1 HIST1H3E Reconstituted Complex 21167174 9606 9606 BIOGRID
PHF1 HIST1H3I Reconstituted Complex 21167174 9606 9606 BIOGRID
PHF1 HIST1H3G Reconstituted Complex 21167174 9606 9606 BIOGRID
PHF1 HIST1H3J Reconstituted Complex 21167174 9606 9606 BIOGRID
PHF1 HIST1H3H Reconstituted Complex 21167174 9606 9606 BIOGRID
PHF1 HIST1H3B Reconstituted Complex 21167174 9606 9606 BIOGRID
PHF1 HIST1H3F Reconstituted Complex 21167174 9606 9606 BIOGRID
PHF1 XRCC5 Affinity Capture-Western 18385154 9606 9606 BIOGRID
PHF1 XRCC6 Affinity Capture-Western 18385154 9606 9606 BIOGRID
PHF1 SMC1A Affinity Capture-Western 18385154 9606 9606 BIOGRID
PHF1 TP53 Affinity Capture-Western 18385154 9606 9606 BIOGRID
PHF1 NCR1 Affinity Capture-Western 18385154 9606 9606 BIOGRID
PHF1 RAD50 Affinity Capture-MS 18385154 9606 9606 BIOGRID
PHF1 DHX9 Affinity Capture-MS 18385154 9606 9606 BIOGRID
PHF1 SMC1A Affinity Capture-MS 18385154 9606 9606 BIOGRID
PHF1 EZH2 Affinity Capture-MS 18385154 9606 9606 BIOGRID
PHF1 RBBP7 Affinity Capture-MS 18385154 9606 9606 BIOGRID
PHF1 SUZ12 Affinity Capture-MS 18385154 9606 9606 BIOGRID
PHF1 TP53 Affinity Capture-MS 18385154 9606 9606 BIOGRID
PHF1 EZH2 Affinity Capture-Western 18285464 9606 9606 BIOGRID
PHF1 SUZ12 Affinity Capture-Western 18285464 9606 9606 BIOGRID
PHF1 EED Affinity Capture-Western 18285464 9606 9606 BIOGRID
PHF1 RBBP7 Affinity Capture-Western 18285464 9606 9606 BIOGRID
PHF1 HIC1 Affinity Capture-Western 22315224 9606 9606 BIOGRID
PHF1 TP53 Affinity Capture-Western 23150668 9606 9606 BIOGRID
PHF1 TFCP2 Two-hybrid 25416956 9606 9606 BIOGRID
PHF1 PDLIM7 Two-hybrid 25416956 9606 9606 BIOGRID
PHF1 CALCOCO2 Two-hybrid 25416956 9606 9606 BIOGRID
PHF1 RBPMS Two-hybrid 25416956 9606 9606 BIOGRID
PHF1 HSD17B14 Two-hybrid 25416956 9606 9606 BIOGRID
PHF1 VAC14 Two-hybrid 25416956 9606 9606 BIOGRID
PHF1 BIRC7 Two-hybrid 25416956 9606 9606 BIOGRID
PHF1 ATXN7L1 Two-hybrid 25416956 9606 9606 BIOGRID
PHF1 HIST3H3 Reconstituted Complex 23273982 9606 9606 BIOGRID
PHF1 HIST3H3 Affinity Capture-Western 23273982 9606 9606 BIOGRID
PHF1 HIST3H3 Co-crystal Structure 23273982 9606 9606 BIOGRID
PHF1 SUZ12 Affinity Capture-MS 23273982 9606 9606 BIOGRID
PHF1 EED Affinity Capture-MS 23273982 9606 9606 BIOGRID
PHF1 HDAC1 Affinity Capture-MS 23273982 9606 9606 BIOGRID
PHF1 RBBP4 Affinity Capture-MS 23273982 9606 9606 BIOGRID
PHF1 EZH1 Affinity Capture-MS 23273982 9606 9606 BIOGRID
PHF1 EZH2 Affinity Capture-MS 23273982 9606 9606 BIOGRID
PHF1 POLR2G Affinity Capture-MS 23273982 9606 9606 BIOGRID
PHF1 SUZ12 Affinity Capture-Western 23273982 9606 9606 BIOGRID
PHF1 EZH2 Affinity Capture-Western 23273982 9606 9606 BIOGRID
PHF1 TFCP2 Two-hybrid 21516116 9606 9606 BIOGRID
PHF1 C10orf12 Affinity Capture-MS 27705803 9606 9606 BIOGRID
PHF1 DEK Affinity Capture-MS 27705803 9606 9606 BIOGRID
PHF1 EED Affinity Capture-MS 27705803 9606 9606 BIOGRID
PHF1 EZH1 Affinity Capture-MS 27705803 9606 9606 BIOGRID
PHF1 EZH2 Affinity Capture-MS 27705803 9606 9606 BIOGRID
PHF1 FBL Affinity Capture-MS 27705803 9606 9606 BIOGRID
PHF1 TP53 Affinity Capture-MS 27705803 9606 9606 BIOGRID
PHF1 RBBP4 Affinity Capture-MS 27705803 9606 9606 BIOGRID
PHF1 RBBP7 Affinity Capture-MS 27705803 9606 9606 BIOGRID
PHF1 SUZ12 Affinity Capture-MS 27705803 9606 9606 BIOGRID
PHF1 CCT8 Affinity Capture-MS 27705803 9606 9606 BIOGRID
PHF1 EZH2 Affinity Capture-Western 27634302 9606 9606 BIOGRID
PHF1 LIMA1 Affinity Capture-MS 29846670 9606 9606 BIOGRID
PHF1 MTA2 Affinity Capture-MS 29846670 9606 9606 BIOGRID
PHF1 FMR1 Affinity Capture-MS 29846670 9606 9606 BIOGRID
PHF1 AFF2 Affinity Capture-MS 29846670 9606 9606 BIOGRID
PHF1 HSPA4 Affinity Capture-MS 29846670 9606 9606 BIOGRID
PHF1 DDX5 Affinity Capture-MS 29846670 9606 9606 BIOGRID
PHF1 RBBP7 Affinity Capture-MS 29846670 9606 9606 BIOGRID
PHF1 RBBP4 Affinity Capture-MS 29846670 9606 9606 BIOGRID
PHF1 WDR77 Affinity Capture-MS 29846670 9606 9606 BIOGRID
PHF1 HIST1H4A Affinity Capture-MS 29846670 9606 9606 BIOGRID
PHF1 NCOA3 Affinity Capture-MS 29846670 9606 9606 BIOGRID
PHF1 CUL4B Affinity Capture-MS 29846670 9606 9606 BIOGRID
PHF1 DDB1 Affinity Capture-MS 29846670 9606 9606 BIOGRID
PHF1 EED Affinity Capture-MS 29846670 9606 9606 BIOGRID
PHF1 EZH2 Affinity Capture-MS 29846670 9606 9606 BIOGRID
PHF1 HDAC1 Affinity Capture-MS 29846670 9606 9606 BIOGRID
PHF1 HDAC2 Affinity Capture-MS 29846670 9606 9606 BIOGRID
PHF1 MTA1 Affinity Capture-MS 29846670 9606 9606 BIOGRID
PHF1 MTA3 Affinity Capture-MS 29846670 9606 9606 BIOGRID
PHF1 PHF1 Affinity Capture-MS 29846670 9606 9606 BIOGRID
PHF1 PRMT5 Affinity Capture-MS 29846670 9606 9606 BIOGRID
PHF1 SIN3A Affinity Capture-MS 29846670 9606 9606 BIOGRID
PHF1 SUZ12 Affinity Capture-MS 29846670 9606 9606 BIOGRID
PHF1 ZNF217 Affinity Capture-MS 29846670 9606 9606 BIOGRID
PHF1 PRMT5 Affinity Capture-Western 29846670 9606 9606 BIOGRID
PHF1 WDR77 Affinity Capture-Western 29846670 9606 9606 BIOGRID
PHF1 CUL4B Affinity Capture-Western 29846670 9606 9606 BIOGRID
PHF1 DDB1 Affinity Capture-Western 29846670 9606 9606 BIOGRID
PHF1 RBX1 Affinity Capture-Western 29846670 9606 9606 BIOGRID
PHF1 MTA1 Affinity Capture-Western 29846670 9606 9606 BIOGRID
PHF1 HDAC2 Affinity Capture-Western 29846670 9606 9606 BIOGRID
PHF1 NCOA3 Affinity Capture-Western 29846670 9606 9606 BIOGRID
PHF1 EZH2 Affinity Capture-Western 29846670 9606 9606 BIOGRID
PHF1 DDB1 Reconstituted Complex 29846670 9606 9606 BIOGRID
PHF1 PRMT5 Reconstituted Complex 29846670 9606 9606 BIOGRID
PHF1 HIST1H3A Reconstituted Complex 29846670 9606 9606 BIOGRID
PHF1 HIST1H4A Reconstituted Complex 29846670 9606 9606 BIOGRID
PHF1 CUL4B Co-localization 29846670 9606 9606 BIOGRID
PHF1 DDB1 Co-localization 29846670 9606 9606 BIOGRID
PHF1 PRMT5 Co-localization 29846670 9606 9606 BIOGRID
PHF1 WDR77 Co-localization 29846670 9606 9606 BIOGRID
PHF1 MDFI Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 ARRDC3 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 FHL2 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 AVPI1 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 SORBS3 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 PFDN5 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 TOX2 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 FOSB Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 RBBP8NL Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 THAP1 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 BHLHE40 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 SPAG8 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 LBX1 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 ABI2 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 MORN3 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 ZSCAN32 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 TP53BP2 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 IRAK1BP1 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 C11orf49 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 BOLL Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 RBPMS Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 DISC1 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 USP54 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 NAB2 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 ZNF526 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 MAGED1 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 EFHC2 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 KIAA0408 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 INCA1 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 ARID5A Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 ZNF71 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 GOLGA6L9 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 BHLHB9 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 KRT40 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 PRR20B Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 PRR20A Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 ZBTB10 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 HOMEZ Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 PRR20D Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 PRR20C Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 ZNF688 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 PRR20E Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 ZIM2 Two-hybrid 32296183 9606 9606 BIOGRID
PHF1 EED Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 EZH2 Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 SUZ12 Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 C10orf12 Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 EZH1 Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 RBBP4 Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 LCOR Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 LIN9 Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 RBBP7 Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 MBD2 Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 C17orf49 Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 MTA2 Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 BPTF Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 GATAD2A Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 CDK2AP1 Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 CHD3 Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 MTA1 Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 BRMS1L Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 BCL11A Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 ZNF512B Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 SUDS3 Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 HMGXB4 Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 SMARCA1 Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 CHD4 Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 SIN3A Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 ARID4B Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 HJURP Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 SAP130 Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 METTL17 Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 HAT1 Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 LIN52 Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 SMARCA5 Affinity Capture-MS 24981860 9606 9606 BIOGRID
PHF1 HDAC2 Affinity Capture-MS 24981860 9606 9606 BIOGRID
 Annotation of PHF1
 TCGA cancer survival map of PHF1


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  PHF1