TcoF overview
| TcoF: | PHF21A | |
| GeneID: | 5300 | |
| Name: | PHD finger protein 21A | |
| Ensembl: | ENSG00000135365 | |
| Species: | Human | |
| Class: | class HC | |
| Family: | PHF | |
| Disease: | 2 | |
| Go term: | 9 | |
| Pathway: | 2 | |
| Hallmark: | -- | |
| Super Enhancer: |
chr11:46140722-46144342 chr11:46126657-46144772 chr11:46139049-46149522 chr11:46120637-46145416 chr11:46127997-46144982 chr11:46121025-46144935 chr11:46121178-46145036 chr11:46140337-46144955 chr11:46118771-46145181 chr11:46117311-46149312 chr11:46140447-46144477 chr11:46119388-46149767 chr11:46064487-46099636 chr11:46004243-46025542 chr11:46003829-46026481 chr11:46004036-46035481 chr11:46002734-46020600 chr11:46016048-46025682 chr11:46003587-46034643 chr11:46004182-46019913 chr11:46004005-46035527 chr11:46003808-46034824 chr11:46003857-46027233 chr11:46003333-46034282 chr11:46003510-46028558 chr11:46070747-46079473 chr11:46002883-46028631 chr11:46003052-46035339 chr11:46067138-46078990 chr11:45985794-46149385 |
|
| Enhancer: |
chr11:46140110-46142480 chr11:45919740-45921680 chr11:45922000-45923530 chr11:46099160-46100680 chr11:45685780-45686720 chr11:45880420-45882390 chr11:45882580-45883610 chr11:45928490-45928690 chr11:46004090-46005570 chr11:46006420-46006800 chr11:45907470-45909520 chr11:45682660-45684020 chr11:45684170-45685050 chr11:45770920-45772900 chr11:46404300-46405010 chr11:46389630-46391040 chr11:46391100-46391490 chr11:45884980-45887310 chr11:46001020-46001310 chr11:46388950-46389200 chr11:46389300-46389550 chr11:46391560-46392860 chr11:46403680-46403840 chr11:46404010-46404130 chr11:46405390-46406630 chr11:45871600-45872430 chr11:45877640-45878090 chr11:45878330-45880280 chr11:46328820-46329360 chr11:46383260-46385680 chr11:46388540-46388840 chr11:46510840-46512750 chr11:46534930-46536370 chr11:46542380-46543550 chr11:46581370-46583690 chr11:46707420-46709720 chr11:46513180-46514830 chr11:46578860-46579990 chr11:45757360-45759500 chr11:45799100-45799750 chr11:45844720-45846180 chr11:45982820-45983970 chr11:46025110-46025510 chr11:46526150-46528530 chr11:46022220-46024480 chr11:46120360-46122860 chr11:45949620-45949720 chr11:46314980-46315490 chr11:46320080-46321480 chr11:46321720-46321900 chr11:46492910-46495360 chr11:46562260-46563490 chr11:46701020-46701190 chr11:46331620-46332580 chr11:46180450-46182870 chr11:45900740-45902050 chr11:46076900-46077360 chr11:46128000-46128650 chr11:46359400-46361820 chr11:46478440-46479180 chr11:45869260-45871010 chr11:46133980-46135320 |
|
| Promoter: |
chr11:45950874-46142729 |
ChIP-seq based regulatory details of PHF21A
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|---|---|---|---|---|---|
| TcoF_00_10068 | PHF21A | cell line | K562 | - | Bone Marrow | ENCODE |
| TcoF_00_40462 | PHF21A | cell line | K-562 | - | Bone Marrow | ReMap |
Downstream target genes of PHF21A
Upstream regulatory details of PHF21A
Protein-protein interaction of PHF21A
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| PHF21A | HDAC1 | Co-purification | 12032298 | 9606 | 9606 | BIOGRID |
| PHF21A | KDM1A | Co-purification | 12032298 | 9606 | 9606 | BIOGRID |
| PHF21A | HMG20B | Affinity Capture-Western | 12032298 | 9606 | 9606 | BIOGRID |
| PHF21A | RCOR1 | Co-purification | 12032298 | 9606 | 9606 | BIOGRID |
| PHF21A | HDAC2 | Co-purification | 12032298 | 9606 | 9606 | BIOGRID |
| PHF21A | GTF2I | Affinity Capture-Western | 12493763 | 9606 | 9606 | BIOGRID |
| PHF21A | ESCO2 | Affinity Capture-Western | 18501190 | 9606 | 9606 | BIOGRID |
| PHF21A | HIST2H3C | Reconstituted Complex | 17687328 | 9606 | 9606 | BIOGRID |
| PHF21A | HIST2H3C | Co-crystal Structure | 17687328 | 9606 | 9606 | BIOGRID |
| PHF21A | BANP | Two-hybrid | 25416956 | 9606 | 9606 | BIOGRID |
| PHF21A | KRT40 | Two-hybrid | 25416956 | 9606 | 9606 | BIOGRID |
| PHF21A | ARNTL | Affinity Capture-MS | 27173435 | 9606 | 9606 | BIOGRID |
| PHF21A | RPRD1A | Affinity Capture-MS | 27173435 | 9606 | 9606 | BIOGRID |
| PHF21A | HAUS6 | Affinity Capture-MS | 27173435 | 9606 | 9606 | BIOGRID |
| PHF21A | PTRF | Affinity Capture-MS | 27173435 | 9606 | 9606 | BIOGRID |
| PHF21A | CCDC132 | Affinity Capture-MS | 27173435 | 9606 | 9606 | BIOGRID |
| PHF21A | GRIPAP1 | Affinity Capture-MS | 27173435 | 9606 | 9606 | BIOGRID |
| PHF21A | PSMD9 | Affinity Capture-MS | 27173435 | 9606 | 9606 | BIOGRID |
| PHF21A | CLOCK | Affinity Capture-MS | 27173435 | 9606 | 9606 | BIOGRID |
| PHF21A | GOLGA5 | Affinity Capture-MS | 27173435 | 9606 | 9606 | BIOGRID |
| PHF21A | YEATS4 | Affinity Capture-MS | 27173435 | 9606 | 9606 | BIOGRID |
| PHF21A | TFPT | Affinity Capture-MS | 27173435 | 9606 | 9606 | BIOGRID |
| PHF21A | NCKAP5L | Affinity Capture-MS | 27173435 | 9606 | 9606 | BIOGRID |
| PHF21A | PKN3 | Affinity Capture-MS | 27173435 | 9606 | 9606 | BIOGRID |
| PHF21A | RABGEF1 | Affinity Capture-MS | 27173435 | 9606 | 9606 | BIOGRID |
| PHF21A | NUF2 | Affinity Capture-MS | 27173435 | 9606 | 9606 | BIOGRID |
| PHF21A | JUN | Affinity Capture-MS | 27173435 | 9606 | 9606 | BIOGRID |
| PHF21A | TSSC1 | Affinity Capture-MS | 27173435 | 9606 | 9606 | BIOGRID |
| PHF21A | BANP | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| PHF21A | SP3 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| PHF21A | FHL3 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| PHF21A | L3MBTL3 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| PHF21A | NUP62 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
Annotation of PHF21A
TCGA cancer survival map of PHF21A
Expression of PHF21A
Disease information of PHF21A