TcoF overview
| TcoF: | PHF5A | |
| GeneID: | 100527963 | |
| Name: | PHD finger-like domain-containing protein 5A | |
| Ensembl: | ENSG00000100410 | |
| Species: | Human | |
| Class: | NA | |
| Family: | PHF | |
| Disease: | 0 | |
| Go term: | 15 | |
| Pathway: | 1 | |
| Hallmark: | -- | |
| Super Enhancer: |
chr22:41805589-41845802 chr22:41825263-41845512 chr22:41825301-41845504 chr22:41827004-41844609 chr22:41827570-41844674 chr22:41808865-41840453 chr22:41797140-41845503 chr22:41796200-41854513 chr22:41797582-41844780 chr22:41825285-41844731 chr22:41805711-41822429 chr22:41808896-41822189 chr22:41806077-41815177 |
|
| Enhancer: |
chr22:41701380-41702320 chr22:41960440-41962230 chr22:42229360-42231330 chr22:41913640-41914480 chr22:41919950-41920840 chr22:42076370-42078350 chr22:42142030-42144110 chr22:41681160-41681540 chr22:41745530-41747560 chr22:41318520-41320000 chr22:41404930-41406210 chr22:41543950-41545040 chr22:41591520-41593270 chr22:41612270-41613120 chr22:41918990-41919200 chr22:41919280-41919830 chr22:41920970-41921190 chr22:41997900-41999260 chr22:42177400-42177680 chr22:42177850-42179820 chr22:42299160-42300860 chr22:42321560-42322100 chr22:42322340-42322640 chr22:42342500-42343020 chr22:41926890-41928090 chr22:42174820-42177280 chr22:42300980-42301440 chr22:42335200-42336140 chr22:42475960-42477930 chr22:42303310-42305550 chr22:41925340-41926690 chr22:41347480-41349560 chr22:41523750-41525890 chr22:41620810-41620970 chr22:41621080-41621790 chr22:41621950-41622620 chr22:41687260-41689760 chr22:41856490-41858900 chr22:41999390-42000040 chr22:42000160-42002160 chr22:42268080-42269800 chr22:42270020-42271340 chr22:41901460-41903790 chr22:41904050-41905800 chr22:41906120-41907870 chr22:41911920-41913530 chr22:41921350-41921800 chr22:41969780-41970730 chr22:42078590-42080930 chr22:42095720-42096030 chr22:42196770-42199160 chr22:42297660-42298970 chr22:42306150-42306410 chr22:42306560-42307210 chr22:41907970-41910380 chr22:41873260-41874140 chr22:41874660-41876950 chr22:42342010-42342420 chr22:42348430-42349200 chr22:42373080-42374370 chr22:41876960-41879290 chr22:41980920-41981190 chr22:41997200-41997510 chr22:41838250-41838760 chr22:41928160-41928660 chr22:42030520-42032110 chr22:42448740-42450060 chr22:42519270-42520050 chr22:42148660-42149950 chr22:41869710-41870400 chr22:41870670-41873150 chr22:42146440-42148590 chr22:42233920-42236130 chr22:42241690-42243780 chr22:42257850-42259990 chr22:42278700-42280840 chr22:42332440-42333790 chr22:42341310-42341910 chr22:42354950-42357000 chr22:42426380-42428470 chr22:42515670-42517910 chr22:42418360-42420260 chr22:42425370-42426260 chr22:41214960-41215190 chr22:41403420-41404440 chr22:41526010-41527390 chr22:41560140-41562600 chr22:41620260-41620720 chr22:41756150-41758120 chr22:41914580-41916170 chr22:42460720-42461740 chr22:42508100-42509530 chr22:41531910-41533650 chr22:41613210-41615420 chr22:41972670-41972880 chr22:41739580-41741150 chr22:42047090-42049530 chr22:42049700-42051490 chr22:42108680-42110000 chr22:41789880-41790090 chr22:41805870-41808130 chr22:42064620-42067080 chr22:42008420-42010780 chr22:41439630-41440080 chr22:41443800-41446290 chr22:41502210-41503060 chr22:41703170-41705080 chr22:41763600-41766080 chr22:42244100-42246020 chr22:42236190-42237630 chr22:41556730-41558300 chr22:41562670-41564380 chr22:41576270-41578560 chr22:41747650-41748640 chr22:41543660-41543840 chr22:41565620-41566400 chr22:41305390-41306440 chr22:41564870-41565500 chr22:42004680-42005040 chr22:42121310-42122550 chr22:41492620-41492920 chr22:41632860-41633170 chr22:41676150-41676930 chr22:42231610-42233320 chr22:41893290-41895720 chr22:41680390-41680900 chr22:41625350-41625510 chr22:41631350-41632480 chr22:41729650-41732000 chr22:41610030-41612140 chr22:41625740-41626140 chr22:41716310-41716650 chr22:41627280-41628080 chr22:41634890-41635440 chr22:41825120-41826790 chr22:41899540-41901320 chr22:41827100-41829490 chr22:41811210-41812090 chr22:41618090-41620020 chr22:41642680-41643050 chr22:41714600-41715080 chr22:41716720-41717130 chr22:41721920-41723200 chr22:41723370-41724570 chr22:41911540-41911770 chr22:42359440-42360580 chr22:41204190-41206570 chr22:42219620-42221700 chr22:41566580-41568500 chr22:41833410-41835320 chr22:41721600-41721720 chr22:41973440-41973810 chr22:41973930-41974800 |
|
| Promoter: |
chr22:41855721-41864696 |
ChIP-seq based regulatory details of PHF5A
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|---|---|---|---|---|---|
| TcoF_00_40088 | PHF5A | cell line | Hep-G2 | - | Liver | ReMap |
Downstream target genes of PHF5A
Upstream regulatory details of PHF5A
Protein-protein interaction of PHF5A
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| PHF5A | SF3B1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| PHF5A | SF3B3 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| PHF5A | SNRPA1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| PHF5A | SF3B4 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| PHF5A | SNRPB2 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| PHF5A | SF3B6 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| PHF5A | SF3B5 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| PHF5A | SF3B2 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| PHF5A | YBX1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| PHF5A | HNRNPA1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| PHF5A | SFPQ | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| PHF5A | PRPF31 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| PHF5A | RBM25 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| PHF5A | S100A10 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
| PHF5A | PRPF31 | Two-hybrid | 22365833 | 9606 | 9606 | BIOGRID |
| PHF5A | SF3B4 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| PHF5A | RPL35 | Positive Genetic | 30033366 | 9606 | 9606 | BIOGRID |
| PHF5A | SKA3 | Positive Genetic | 30033366 | 9606 | 9606 | BIOGRID |
| PHF5A | SPATA5 | Positive Genetic | 30033366 | 9606 | 9606 | BIOGRID |
| PHF5A | SF3B1 | Reconstituted Complex | 27720643 | 9606 | 9606 | BIOGRID |
| PHF5A | SF3B3 | Reconstituted Complex | 27720643 | 9606 | 9606 | BIOGRID |
| PHF5A | SF3B6 | Reconstituted Complex | 27720643 | 9606 | 9606 | BIOGRID |
| PHF5A | WDR61 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| PHF5A | SLC4A1AP | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| PHF5A | TTC37 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| PHF5A | SF3A2 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| PHF5A | PFDN4 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| PHF5A | SF3A1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| PHF5A | CDC73 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| PHF5A | ATRIP | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| PHF5A | PFDN5 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
Annotation of PHF5A
TCGA cancer survival map of PHF5A
Expression of PHF5A
Disease information of PHF5A