TcoF: | PRKDC | |
GeneID: | 11168 | |
Name: | DNA-dependent protein kinase catalytic subunit | |
Ensembl: | ENSG00000253729 | |
Species: | Human | |
Class: | class HC | |
Family: | Others | |
Disease: | 22 | |
Go term: | 75 | |
Pathway: | 13 | |
Hallmark: | 7 | |
Super Enhancer: |
chr8:48753753-48783924 chr8:48721280-48818953 chr8:48858832-48882819 |
|
Enhancer: |
chr8:48648560-48649470 chr8:48813830-48815120 chr8:48686940-48689400 chr8:48793410-48793930 chr8:49052960-49055140 chr8:48949120-48950820 chr8:48864300-48865920 chr8:48853300-48855760 chr8:48434320-48435420 chr8:48438660-48439290 chr8:48439370-48439960 chr8:48521070-48521820 chr8:48521910-48524340 chr8:48524380-48525750 chr8:48594570-48596510 chr8:48806440-48807780 chr8:48811130-48812930 chr8:48886400-48887290 chr8:48790530-48791830 chr8:48700800-48701460 chr8:48734350-48736410 chr8:48739420-48740720 chr8:48792220-48793120 chr8:48815800-48817420 chr8:48933760-48934640 chr8:48878970-48879920 chr8:48880050-48882350 chr8:48894750-48896180 chr8:48953680-48955590 chr8:48350620-48352880 chr8:48452150-48453580 chr8:48533740-48534650 chr8:48575260-48576960 chr8:48581100-48582620 chr8:48596690-48597520 chr8:48636610-48637780 chr8:48644790-48645430 chr8:48645480-48647860 chr8:49186020-49187340 chr8:49193300-49195410 chr8:49235880-49237580 chr8:49288490-49290980 chr8:49291860-49293870 chr8:49294050-49295000 chr8:49320370-49320670 chr8:49321080-49321470 chr8:48545100-48546940 chr8:49217300-49218660 chr8:49104000-49105500 chr8:49172750-49174390 chr8:48817770-48818730 chr8:48473580-48474420 chr8:48748220-48748800 chr8:48763740-48765230 chr8:48771780-48772170 chr8:48891220-48892430 chr8:48550310-48552280 chr8:48586500-48588980 chr8:49059090-49060920 chr8:49302130-49304090 chr8:49447660-49449240 chr8:49493640-49495770 chr8:49501740-49503940 chr8:49533090-49534820 chr8:48235580-48236630 chr8:48268420-48269980 chr8:48277380-48279400 chr8:48289420-48291270 chr8:48291530-48292110 chr8:48281310-48283780 chr8:49086580-49087370 chr8:49176520-49177860 chr8:49254960-49256870 chr8:48835920-48836750 chr8:48506130-48506590 chr8:48744490-48746750 chr8:48857100-48858410 chr8:49220490-49222450 chr8:48510280-48511500 chr8:48743760-48744370 |
|
Promoter: |
chr8:48685669-48872743 |
Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
---|---|---|---|---|---|---|
TcoF_00_21095 | PRKDC | cell line | None | GSM1340089 | None | Cistrome |
TcoF_00_21096 | PRKDC | cell line | None | GSM1340090 | None | Cistrome |
TcoF_00_20910 | PRKDC | cell line | MCF-7 | GSM1470001 | Breast | Cistrome |
TcoF_00_20911 | PRKDC | cell line | MCF-7 | GSM1470002 | Breast | Cistrome |
TcoF_00_20912 | PRKDC | cell line | MCF-7 | GSM1470003 | Breast | Cistrome |
TcoF_00_20913 | PRKDC | cell line | MCF-7 | GSM1470004 | Breast | Cistrome |
TcoF_00_20914 | PRKDC | cell line | MCF-7 | GSM1470005 | Breast | Cistrome |
TcoF_00_20915 | PRKDC | cell line | MCF-7 | GSM1470006 | Breast | Cistrome |
OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
---|---|---|---|---|---|---|
PRKDC | AR | Affinity Capture-MS | 15640154 | 9606 | 9606 | BIOGRID |
PRKDC | AP1B1 | Protein-peptide | 10608806 | 9606 | 9606 | BIOGRID |
PRKDC | ATM | Protein-peptide | 10608806 | 9606 | 9606 | BIOGRID |
PRKDC | BRCA1 | Protein-peptide | 10608806 | 9606 | 9606 | BIOGRID |
PRKDC | CHEK1 | Protein-peptide | 10608806 | 9606 | 9606 | BIOGRID |
PRKDC | E4F1 | Protein-peptide | 10608806 | 9606 | 9606 | BIOGRID |
PRKDC | LIG4 | Protein-peptide | 10608806 | 9606 | 9606 | BIOGRID |
PRKDC | MRE11A | Protein-peptide | 10608806 | 9606 | 9606 | BIOGRID |
PRKDC | RAD17 | Protein-peptide | 10608806 | 9606 | 9606 | BIOGRID |
PRKDC | RBBP8 | Protein-peptide | 10608806 | 9606 | 9606 | BIOGRID |
PRKDC | TP53 | Protein-peptide | 10608806 | 9606 | 9606 | BIOGRID |
PRKDC | WRN | Protein-peptide | 10608806 | 9606 | 9606 | BIOGRID |
PRKDC | TP53 | Biochemical Activity | 12756247 | 9606 | 9606 | BIOGRID |
PRKDC | NCOA6 | Biochemical Activity | 10823961 | 9606 | 9606 | BIOGRID |
PRKDC | KAT2A | Biochemical Activity | 9488450 | 9606 | 9606 | BIOGRID |
PRKDC | RPA2 | Affinity Capture-Western | 10064605 | 9606 | 9606 | BIOGRID |
PRKDC | XRCC6 | Affinity Capture-Western | 10064605 | 9606 | 9606 | BIOGRID |
PRKDC | RPA2 | Reconstituted Complex | 10064605 | 9606 | 9606 | BIOGRID |
PRKDC | RPA1 | Reconstituted Complex | 10064605 | 9606 | 9606 | BIOGRID |
PRKDC | C1D | Two-hybrid | 9679063 | 9606 | 9606 | BIOGRID |
PRKDC | C1D | Biochemical Activity | 9679063 | 9606 | 9606 | BIOGRID |
PRKDC | TP53 | Biochemical Activity | 9679063 | 9606 | 9606 | BIOGRID |
PRKDC | C1D | Affinity Capture-Western | 9679063 | 9606 | 9606 | BIOGRID |
PRKDC | WRN | Biochemical Activity | 11889123 | 9606 | 9606 | BIOGRID |
PRKDC | IKBKB | Biochemical Activity | 9632806 | 9606 | 9606 | BIOGRID |
PRKDC | CHUK | Biochemical Activity | 9632806 | 9606 | 9606 | BIOGRID |
PRKDC | AKT2 | Biochemical Activity | 16221682 | 9606 | 9606 | BIOGRID |
PRKDC | ILF3 | Co-purification | 9442054 | 9606 | 9606 | BIOGRID |
PRKDC | ILF2 | Co-purification | 9442054 | 9606 | 9606 | BIOGRID |
PRKDC | EIF2S2 | Co-purification | 9442054 | 9606 | 9606 | BIOGRID |
PRKDC | NCF1 | Biochemical Activity | 9914162 | 9606 | 9606 | BIOGRID |
PRKDC | NCF2 | Biochemical Activity | 9914162 | 9606 | 9606 | BIOGRID |
PRKDC | NCF4 | Biochemical Activity | 9914162 | 9606 | 9606 | BIOGRID |
PRKDC | MAPK8 | Biochemical Activity | 11749722 | 9606 | 9606 | BIOGRID |
PRKDC | MAPK9 | Biochemical Activity | 11749722 | 9606 | 9606 | BIOGRID |
PRKDC | CIB1 | Two-hybrid | 9372844 | 9606 | 9606 | BIOGRID |
PRKDC | ATM | Affinity Capture-Western | 10464290 | 9606 | 9606 | BIOGRID |
PRKDC | DCLRE1C | Reconstituted Complex | 11955432 | 9606 | 9606 | BIOGRID |
PRKDC | DCLRE1C | Biochemical Activity | 11955432 | 9606 | 9606 | BIOGRID |
PRKDC | SIRT6 | Co-localization | 20157594 | 9606 | 9606 | BIOGRID |
PRKDC | AIRE | Affinity Capture-Western | 20085707 | 9606 | 9606 | BIOGRID |
PRKDC | POU2F1 | Biochemical Activity | 17213819 | 9606 | 9606 | BIOGRID |
PRKDC | KAT5 | Affinity Capture-Western | 16603769 | 9606 | 9606 | BIOGRID |
PRKDC | H2AFX | Biochemical Activity | 14627815 | 9606 | 9606 | BIOGRID |
PRKDC | POU2F1 | Biochemical Activity | 14612514 | 9606 | 9606 | BIOGRID |
PRKDC | PDX1 | Biochemical Activity | 16166097 | 9606 | 9606 | BIOGRID |
PRKDC | AICDA | Affinity Capture-Western | 15634916 | 9606 | 9606 | BIOGRID |
PRKDC | H2AFX | Biochemical Activity | 15613478 | 9606 | 9606 | BIOGRID |
PRKDC | DHX9 | Biochemical Activity | 15613478 | 9606 | 9606 | BIOGRID |
PRKDC | DHX9 | Co-fractionation | 15613478 | 9606 | 9606 | BIOGRID |
PRKDC | HDAC3 | Biochemical Activity | 17242407 | 9606 | 9606 | BIOGRID |
PRKDC | BIRC5 | Affinity Capture-Western | 20394854 | 9606 | 9606 | BIOGRID |
PRKDC | H2AFX | Biochemical Activity | 20356835 | 9606 | 9606 | BIOGRID |
PRKDC | HIST1H1A | Biochemical Activity | 20356835 | 9606 | 9606 | BIOGRID |
PRKDC | PPP2CA | Affinity Capture-Western | 20065038 | 9606 | 9606 | BIOGRID |
PRKDC | PPP6C | Affinity Capture-Western | 20065038 | 9606 | 9606 | BIOGRID |
PRKDC | PPP6R1 | Affinity Capture-Western | 20065038 | 9606 | 9606 | BIOGRID |
PRKDC | PPP6R2 | Affinity Capture-Western | 20065038 | 9606 | 9606 | BIOGRID |
PRKDC | PPP6R3 | Affinity Capture-Western | 20065038 | 9606 | 9606 | BIOGRID |
PRKDC | PRKDC | Biochemical Activity | 20065038 | 9606 | 9606 | BIOGRID |
PRKDC | SP1 | Biochemical Activity | 8422676 | 9606 | 9606 | BIOGRID |
PRKDC | HOXB7 | Affinity Capture-Western | 17308091 | 9606 | 9606 | BIOGRID |
PRKDC | XRCC5 | Affinity Capture-Western | 15758953 | 9606 | 9606 | BIOGRID |
PRKDC | CTDP1 | Biochemical Activity | 21450944 | 9606 | 9606 | BIOGRID |
PRKDC | CTDP1 | Protein-peptide | 21450944 | 9606 | 9606 | BIOGRID |
PRKDC | ILF3 | Affinity Capture-Western | 21969602 | 9606 | 9606 | BIOGRID |
PRKDC | XRCC6 | Affinity Capture-Western | 21969602 | 9606 | 9606 | BIOGRID |
PRKDC | XRCC5 | Affinity Capture-Western | 22404984 | 9606 | 9606 | BIOGRID |
PRKDC | XRCC5 | Co-localization | 22404984 | 9606 | 9606 | BIOGRID |
PRKDC | CSNK2A1 | Affinity Capture-Western | 22404984 | 9606 | 9606 | BIOGRID |
PRKDC | HIST1H3A | Co-localization | 22404984 | 9606 | 9606 | BIOGRID |
PRKDC | HNRNPA1 | Biochemical Activity | 14704337 | 9606 | 9606 | BIOGRID |
PRKDC | HNRNPC | Biochemical Activity | 14704337 | 9606 | 9606 | BIOGRID |
PRKDC | TP53 | Affinity Capture-Western | 19918261 | 9606 | 9606 | BIOGRID |
PRKDC | ARHGEF6 | Affinity Capture-Western | 19918261 | 9606 | 9606 | BIOGRID |
PRKDC | TP53 | Biochemical Activity | 9363941 | 9606 | 9606 | BIOGRID |
PRKDC | VPRBP | Biochemical Activity | 22184063 | 9606 | 9606 | BIOGRID |
PRKDC | H2AFX | Biochemical Activity | 22184063 | 9606 | 9606 | BIOGRID |
PRKDC | DCLRE1C | Biochemical Activity | 15456891 | 9606 | 9606 | BIOGRID |
PRKDC | MBP | Biochemical Activity | 15147269 | 9606 | 9606 | BIOGRID |
PRKDC | XPA | Biochemical Activity | 16540648 | 9606 | 9606 | BIOGRID |
PRKDC | RPA2 | Biochemical Activity | 16540648 | 9606 | 9606 | BIOGRID |
PRKDC | RPA2 | Biochemical Activity | 9295339 | 9606 | 9606 | BIOGRID |
PRKDC | NR3C1 | Biochemical Activity | 9038175 | 9606 | 9606 | BIOGRID |
PRKDC | XRCC4 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
PRKDC | EFTUD2 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
PRKDC | PRPF8 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
PRKDC | CWC27 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
PRKDC | THOC6 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
PRKDC | YBX1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
PRKDC | TRA2B | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
PRKDC | U2AF2 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
PRKDC | RBM25 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
PRKDC | DHX38 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
PRKDC | RAD21 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
PRKDC | SRP14 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
PRKDC | RPS11 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
PRKDC | SMARCA5 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
PRKDC | SRSF10 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
PRKDC | SRP54 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
PRKDC | PHGDH | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
PRKDC | RANBP2 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
PRKDC | PTER | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
PRKDC | THYN1 | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
PRKDC | TPR | Co-fractionation | 22939629 | 9606 | 9606 | BIOGRID |
PRKDC | PGR | Biochemical Activity | 10750018 | 9606 | 9606 | BIOGRID |
PRKDC | XRCC6 | Biochemical Activity | 10750018 | 9606 | 9606 | BIOGRID |
PRKDC | XRCC5 | Biochemical Activity | 10750018 | 9606 | 9606 | BIOGRID |
PRKDC | PRKDC | Biochemical Activity | 10750018 | 9606 | 9606 | BIOGRID |
PRKDC | AKT1 | Biochemical Activity | 15262962 | 9606 | 9606 | BIOGRID |
PRKDC | AKT1 | Affinity Capture-Western | 15262962 | 9606 | 9606 | BIOGRID |
PRKDC | LIG4 | Biochemical Activity | 15194694 | 9606 | 9606 | BIOGRID |
PRKDC | GSK3A | Biochemical Activity | 15678105 | 9606 | 9606 | BIOGRID |
PRKDC | GSK3B | Biochemical Activity | 15678105 | 9606 | 9606 | BIOGRID |
PRKDC | AKT2 | Biochemical Activity | 15678105 | 9606 | 9606 | BIOGRID |
PRKDC | AKT1 | Reconstituted Complex | 15678105 | 9606 | 9606 | BIOGRID |
PRKDC | AKT1 | Affinity Capture-Western | 15678105 | 9606 | 9606 | BIOGRID |
PRKDC | SRF | Biochemical Activity | 8407951 | 9606 | 9606 | BIOGRID |
PRKDC | JUN | Biochemical Activity | 8464713 | 9606 | 9606 | BIOGRID |
PRKDC | DCLRE1C | Affinity Capture-Western | 16857680 | 9606 | 9606 | BIOGRID |
PRKDC | XRCC5 | Affinity Capture-Western | 16857680 | 9606 | 9606 | BIOGRID |
PRKDC | EIF4EBP1 | Biochemical Activity | 10713094 | 9606 | 9606 | BIOGRID |
PRKDC | TP53 | Biochemical Activity | 10713094 | 9606 | 9606 | BIOGRID |
PRKDC | CHEK2 | Biochemical Activity | 10713094 | 9606 | 9606 | BIOGRID |
PRKDC | RPA2 | Biochemical Activity | 10713094 | 9606 | 9606 | BIOGRID |
PRKDC | XRCC5 | Co-crystal Structure | 20023628 | 9606 | 9606 | BIOGRID |
PRKDC | CIB1 | Affinity Capture-Western | 15190070 | 9606 | 9606 | BIOGRID |
PRKDC | TP53 | Biochemical Activity | 10608806 | 9606 | 9606 | BIOGRID |
PRKDC | CTPS2 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
PRKDC | GTF2I | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
PRKDC | PRDX1 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
PRKDC | TP53 | Biochemical Activity | 9744860 | 9606 | 9606 | BIOGRID |
PRKDC | TP53 | Biochemical Activity | 25362358 | 9606 | 9606 | BIOGRID |
PRKDC | RASSF1 | Protein-peptide | 10608806 | 9606 | 9606 | BIOGRID |
PRKDC | ANAPC2 | Affinity Capture-Western | 26221070 | 9606 | 9606 | BIOGRID |
PRKDC | FZR1 | Affinity Capture-Western | 26221070 | 9606 | 9606 | BIOGRID |
PRKDC | ALOX15 | Affinity Capture-Western | 18785202 | 9606 | 9606 | BIOGRID |
PRKDC | RPA2 | Biochemical Activity | 8943020 | 9606 | 9606 | BIOGRID |
PRKDC | XRCC1 | Affinity Capture-Western | 18678286 | 9606 | 9606 | BIOGRID |
PRKDC | RRM2 | Negative Genetic | 28319113 | 9606 | 9606 | BIOGRID |
PRKDC | VHL | Negative Genetic | 28319113 | 9606 | 9606 | BIOGRID |
PRKDC | FANCD2 | Synthetic Lethality | 24036544 | 9606 | 9606 | BIOGRID |
PRKDC | HIF1A | Affinity Capture-Western | 15272235 | 9606 | 9606 | BIOGRID |
PRKDC | TOP1 | Affinity Capture-Western | 28415827 | 9606 | 9606 | BIOGRID |
PRKDC | TOP1 | Biochemical Activity | 28415827 | 9606 | 9606 | BIOGRID |
PRKDC | RNF144A | Affinity Capture-Western | 28450160 | 9606 | 9606 | BIOGRID |
PRKDC | TP53 | Affinity Capture-Western | 11751391 | 9606 | 9606 | BIOGRID |
PRKDC | TP53 | Biochemical Activity | 10601022 | 9606 | 9606 | BIOGRID |
PRKDC | TP53 | Protein-peptide | 8940078 | 9606 | 9606 | BIOGRID |
PRKDC | TSPO | Negative Genetic | 28319085 | 9606 | 9606 | BIOGRID |
PRKDC | RPS6KA2 | Negative Genetic | 28319085 | 9606 | 9606 | BIOGRID |
PRKDC | SSTR4 | Negative Genetic | 28319085 | 9606 | 9606 | BIOGRID |
PRKDC | XRCC5 | Co-crystal Structure | 28154079 | 9606 | 9606 | BIOGRID |
PRKDC | FH | Biochemical Activity | 26237645 | 9606 | 9606 | BIOGRID |
PRKDC | XRCC4 | Biochemical Activity | 9259561 | 9606 | 9606 | BIOGRID |
PRKDC | PRKDC | Biochemical Activity | 25223785 | 9606 | 9606 | BIOGRID |
PRKDC | BRCA1 | Affinity Capture-Western | 25223785 | 9606 | 9606 | BIOGRID |
PRKDC | BRCA1 | Reconstituted Complex | 25223785 | 9606 | 9606 | BIOGRID |
PRKDC | FLNA | Co-localization | 20305393 | 9606 | 9606 | BIOGRID |
PRKDC | CHEK2 | Biochemical Activity | 17171639 | 9606 | 9606 | BIOGRID |
PRKDC | XRCC6 | Affinity Capture-Western | 28345663 | 9606 | 9606 | BIOGRID |
PRKDC | XRCC5 | Affinity Capture-Western | 28345663 | 9606 | 9606 | BIOGRID |
PRKDC | KIAA1217 | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
PRKDC | FAM161A | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
PRKDC | PWWP2B | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
PRKDC | TBC1D28 | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
PRKDC | NRXN1 | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
PRKDC | LAMC3 | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
PRKDC | ZNF840P | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
PRKDC | TIAM2 | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
PRKDC | SYNE2 | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
PRKDC | GTPBP4 | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
PRKDC | SFPQ | Affinity Capture-Western | 30725116 | 9606 | 9606 | BIOGRID |
PRKDC | HIST1H1A | Biochemical Activity | 15671175 | 9606 | 9913 | BIOGRID |
PRKDC | tat | Biochemical Activity | 21450944 | 9606 | 11676 | BIOGRID |