TcoF overview
| TcoF: | RBBP8 | |
| GeneID: | 27316 | |
| Name: | DNA endonuclease RBBP8 | |
| Ensembl: | ENSG00000101773 | |
| Species: | Human | |
| Class: | class HC | |
| Family: | RBBP | |
| Disease: | 11 | |
| Go term: | 28 | |
| Pathway: | 16 | |
| Hallmark: | 2 | |
| Super Enhancer: |
chr18:20492020-20524692 chr18:20494091-20524633 chr18:20492472-20522548 chr18:20478758-20524760 chr18:20508156-20563321 chr18:20253719-20303685 chr18:20260370-20309725 chr18:20260468-20309609 chr18:20246203-20292573 chr18:20393641-20449603 chr18:20246484-20276256 chr18:20393679-20439082 chr18:20393545-20449740 chr18:20246062-20276566 chr18:20393560-20452679 chr18:20393761-20452502 chr18:20393504-20449766 chr18:20246149-20315789 chr18:20270777-20276525 chr18:20246484-20292211 chr18:20246069-20294458 chr18:20393846-20453562 chr18:20247131-20276303 chr18:20392656-20453811 chr18:20247265-20275723 chr18:20253976-20280570 chr18:20246838-20291811 chr18:20246337-20276899 chr18:20423261-20437555 chr18:20392992-20439194 chr18:20245911-20277105 chr18:20246162-20293313 chr18:20246438-20293834 |
|
| Enhancer: |
chr18:20514120-20516570 chr18:20917800-20918220 chr18:20533780-20534260 chr18:20863460-20865110 chr18:20886560-20888910 chr18:20910190-20912400 chr18:20840440-20842650 chr18:20531790-20533500 chr18:20557590-20559170 chr18:20068550-20069050 chr18:20083630-20086020 chr18:20097030-20098330 chr18:20118280-20119340 chr18:20124270-20124560 chr18:20720810-20722820 chr18:20722910-20724550 chr18:20746410-20747610 chr18:20759380-20761250 chr18:20881920-20884180 chr18:20932730-20934270 chr18:20934380-20936550 chr18:20069240-20070940 chr18:20064900-20067210 chr18:20171130-20171640 chr18:20247370-20248820 chr18:20253840-20255510 chr18:20401540-20403920 chr18:20492740-20495180 chr18:20694270-20696440 chr18:20716570-20719010 chr18:20861460-20863160 chr18:20871070-20872740 chr18:20890840-20893210 chr18:21015350-21017740 chr18:21083680-21084330 chr18:20184080-20185960 chr18:19620430-19620980 chr18:19623900-19626380 chr18:19628620-19630000 chr18:19663720-19665380 chr18:19753930-19754390 chr18:19754430-19755820 chr18:19757080-19757960 chr18:19789930-19790820 chr18:19790930-19791250 chr18:19794380-19795500 chr18:19802790-19804430 chr18:19830420-19831300 chr18:19861800-19863860 chr18:19865170-19866020 chr18:19866480-19867470 chr18:19881580-19882810 chr18:19921990-19922450 chr18:19924290-19926220 chr18:19926290-19927820 chr18:20500940-20502420 chr18:21038590-21039790 chr18:21040330-21041660 chr18:21109680-21109990 chr18:21110100-21110190 chr18:21209920-21210330 chr18:19611320-19613790 chr18:19758000-19760010 chr18:19922530-19924050 chr18:20130370-20132240 chr18:20192510-20194050 chr18:20611230-20613460 chr18:20738780-20739910 chr18:20681660-20682420 chr18:20843380-20844060 chr18:20859210-20860860 |
|
| Promoter: |
chr18:20378224-20606451 |
ChIP-seq based regulatory details of RBBP8
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|
Downstream target genes of RBBP8
Upstream regulatory details of RBBP8
Protein-protein interaction of RBBP8
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| RBBP8 | RBL1 | Two-hybrid | 9721205 | 9606 | 9606 | BIOGRID |
| RBBP8 | LMO4 | Two-hybrid | 11751867 | 9606 | 9606 | BIOGRID |
| RBBP8 | HID1 | Two-hybrid | 16189514 | 9606 | 9606 | BIOGRID |
| RBBP8 | FXR2 | Two-hybrid | 16189514 | 9606 | 9606 | BIOGRID |
| RBBP8 | WDYHV1 | Two-hybrid | 16189514 | 9606 | 9606 | BIOGRID |
| RBBP8 | RBL1 | Two-hybrid | 16189514 | 9606 | 9606 | BIOGRID |
| RBBP8 | BRCA1 | Affinity Capture-Western | 10910365 | 9606 | 9606 | BIOGRID |
| RBBP8 | RBBP8 | Affinity Capture-Western | 15084581 | 9606 | 9606 | BIOGRID |
| RBBP8 | RBBP8 | Reconstituted Complex | 15084581 | 9606 | 9606 | BIOGRID |
| RBBP8 | IKZF1 | Affinity Capture-Western | 11959865 | 9606 | 9606 | BIOGRID |
| RBBP8 | RBL2 | Affinity Capture-Western | 10449734 | 9606 | 9606 | BIOGRID |
| RBBP8 | RBL2 | Two-hybrid | 10449734 | 9606 | 9606 | BIOGRID |
| RBBP8 | SIAH1 | Two-hybrid | 14654780 | 9606 | 9606 | BIOGRID |
| RBBP8 | BRCA1 | Reconstituted Complex | 10764811 | 9606 | 9606 | BIOGRID |
| RBBP8 | BRCA1 | Two-hybrid | 10764811 | 9606 | 9606 | BIOGRID |
| RBBP8 | CTBP1 | Reconstituted Complex | 9535825 | 9606 | 9606 | BIOGRID |
| RBBP8 | CTBP1 | Affinity Capture-Western | 9535825 | 9606 | 9606 | BIOGRID |
| RBBP8 | RB1 | Two-hybrid | 9721205 | 9606 | 9606 | BIOGRID |
| RBBP8 | RBL2 | Two-hybrid | 9721205 | 9606 | 9606 | BIOGRID |
| RBBP8 | RB1 | Affinity Capture-Western | 16581787 | 9606 | 9606 | BIOGRID |
| RBBP8 | BARD1 | Affinity Capture-Western | 16391231 | 9606 | 9606 | BIOGRID |
| RBBP8 | BARD1 | Affinity Capture-Western | 20351172 | 9606 | 9606 | BIOGRID |
| RBBP8 | BRCA1 | Affinity Capture-Western | 20351172 | 9606 | 9606 | BIOGRID |
| RBBP8 | ZNF350 | Affinity Capture-Western | 16843262 | 9606 | 9606 | BIOGRID |
| RBBP8 | BRCA1 | Affinity Capture-Western | 16843262 | 9606 | 9606 | BIOGRID |
| RBBP8 | ATM | Affinity Capture-Western | 10910365 | 9606 | 9606 | BIOGRID |
| RBBP8 | BRCA1 | Affinity Capture-Western | 11689934 | 9606 | 9606 | BIOGRID |
| RBBP8 | NBN | Affinity Capture-Western | 18171670 | 9606 | 9606 | BIOGRID |
| RBBP8 | PCNA | Reconstituted Complex | 19342888 | 9606 | 9606 | BIOGRID |
| RBBP8 | PCNA | Affinity Capture-Western | 19342888 | 9606 | 9606 | BIOGRID |
| RBBP8 | PCNA | Two-hybrid | 19342888 | 9606 | 9606 | BIOGRID |
| RBBP8 | RGS17 | Two-hybrid | 21988832 | 9606 | 9606 | BIOGRID |
| RBBP8 | TMEM54 | Two-hybrid | 21988832 | 9606 | 9606 | BIOGRID |
| RBBP8 | LMO4 | Two-hybrid | 25416956 | 9606 | 9606 | BIOGRID |
| RBBP8 | FZR1 | Reconstituted Complex | 25349192 | 9606 | 9606 | BIOGRID |
| RBBP8 | MRE11A | Reconstituted Complex | 25349192 | 9606 | 9606 | BIOGRID |
| RBBP8 | FANCD2 | Affinity Capture-Western | 24556218 | 9606 | 9606 | BIOGRID |
| RBBP8 | BRCA1 | Affinity Capture-Western | 25310973 | 9606 | 9606 | BIOGRID |
| RBBP8 | USP4 | Affinity Capture-Western | 26455393 | 9606 | 9606 | BIOGRID |
| RBBP8 | EXD2 | Affinity Capture-MS | 26807646 | 9606 | 9606 | BIOGRID |
| RBBP8 | EXO1 | Affinity Capture-MS | 26807646 | 9606 | 9606 | BIOGRID |
| RBBP8 | MRE11A | Affinity Capture-MS | 26807646 | 9606 | 9606 | BIOGRID |
| RBBP8 | CTBP1 | Affinity Capture-MS | 26807646 | 9606 | 9606 | BIOGRID |
| RBBP8 | CTBP2 | Affinity Capture-MS | 26807646 | 9606 | 9606 | BIOGRID |
| RBBP8 | EXD2 | Affinity Capture-Western | 26807646 | 9606 | 9606 | BIOGRID |
| RBBP8 | BRCA1 | Affinity Capture-MS | 26387952 | 9606 | 9606 | BIOGRID |
| RBBP8 | LMO4 | Affinity Capture-MS | 26387952 | 9606 | 9606 | BIOGRID |
| RBBP8 | NBN | Affinity Capture-MS | 26387952 | 9606 | 9606 | BIOGRID |
| RBBP8 | BRIX1 | Affinity Capture-MS | 26387952 | 9606 | 9606 | BIOGRID |
| RBBP8 | DEFA1 | Affinity Capture-MS | 26387952 | 9606 | 9606 | BIOGRID |
| RBBP8 | USP4 | Affinity Capture-MS | 26387952 | 9606 | 9606 | BIOGRID |
| RBBP8 | SIAH1 | Affinity Capture-MS | 26387952 | 9606 | 9606 | BIOGRID |
| RBBP8 | MRE11A | Affinity Capture-MS | 26387952 | 9606 | 9606 | BIOGRID |
| RBBP8 | XRCC1 | Affinity Capture-MS | 26387952 | 9606 | 9606 | BIOGRID |
| RBBP8 | USP4 | Affinity Capture-Western | 26387952 | 9606 | 9606 | BIOGRID |
| RBBP8 | USP4 | Reconstituted Complex | 26387952 | 9606 | 9606 | BIOGRID |
| RBBP8 | NBN | Affinity Capture-Western | 26387952 | 9606 | 9606 | BIOGRID |
| RBBP8 | FANCD2 | Reconstituted Complex | 24794434 | 9606 | 9606 | BIOGRID |
| RBBP8 | FANCD2 | Phenotypic Enhancement | 24794434 | 9606 | 9606 | BIOGRID |
| RBBP8 | FANCD2 | FRET | 24794434 | 9606 | 9606 | BIOGRID |
| RBBP8 | UBC | Far Western | 24794434 | 9606 | 9606 | BIOGRID |
| RBBP8 | FANCD2 | Reconstituted Complex | 24794430 | 9606 | 9606 | BIOGRID |
| RBBP8 | FANCD2 | Synthetic Lethality | 24794430 | 9606 | 9606 | BIOGRID |
| RBBP8 | FANCD2 | Co-localization | 24794430 | 9606 | 9606 | BIOGRID |
| RBBP8 | KLHL15 | Affinity Capture-Western | 27561354 | 9606 | 9606 | BIOGRID |
| RBBP8 | CUL3 | Affinity Capture-Western | 27561354 | 9606 | 9606 | BIOGRID |
| RBBP8 | KLHL15 | Affinity Capture-MS | 27561354 | 9606 | 9606 | BIOGRID |
| RBBP8 | CUL3 | Affinity Capture-MS | 27561354 | 9606 | 9606 | BIOGRID |
| RBBP8 | CUL3 | Reconstituted Complex | 27561354 | 9606 | 9606 | BIOGRID |
| RBBP8 | KLHL15 | Reconstituted Complex | 27561354 | 9606 | 9606 | BIOGRID |
| RBBP8 | MRE11A | Reconstituted Complex | 27561354 | 9606 | 9606 | BIOGRID |
| RBBP8 | NBN | Reconstituted Complex | 27561354 | 9606 | 9606 | BIOGRID |
| RBBP8 | MRE11A | Affinity Capture-Western | 27561354 | 9606 | 9606 | BIOGRID |
| RBBP8 | NBN | Affinity Capture-Western | 27561354 | 9606 | 9606 | BIOGRID |
| RBBP8 | CUL3 | Protein-peptide | 27561354 | 9606 | 9606 | BIOGRID |
| RBBP8 | KLHL15 | Protein-peptide | 27561354 | 9606 | 9606 | BIOGRID |
| RBBP8 | RPL32 | Negative Genetic | 30033366 | 9606 | 9606 | BIOGRID |
| RBBP8 | TIMELESS | Negative Genetic | 30033366 | 9606 | 9606 | BIOGRID |
| RBBP8 | TIPIN | Negative Genetic | 30033366 | 9606 | 9606 | BIOGRID |
| RBBP8 | TRRAP | Positive Genetic | 30033366 | 9606 | 9606 | BIOGRID |
| RBBP8 | UBA2 | Negative Genetic | 30033366 | 9606 | 9606 | BIOGRID |
| RBBP8 | ZNF598 | Positive Genetic | 30033366 | 9606 | 9606 | BIOGRID |
| RBBP8 | RBBP8 | Reconstituted Complex | 17214969 | 9606 | 9606 | BIOGRID |
| RBBP8 | RBBP8 | Affinity Capture-MS | 15084581 | 9606 | 9606 | BIOGRID |
| RBBP8 | RBBP8 | Co-purification | 15084581 | 9606 | 9606 | BIOGRID |
| RBBP8 | BRCA1 | Affinity Capture-Western | 28132842 | 9606 | 9606 | BIOGRID |
| RBBP8 | NBN | Reconstituted Complex | 23468639 | 9606 | 9606 | BIOGRID |
| RBBP8 | WDHD1 | Affinity Capture-MS | 27940557 | 9606 | 9606 | BIOGRID |
| RBBP8 | RAD50 | Affinity Capture-MS | 27940557 | 9606 | 9606 | BIOGRID |
| RBBP8 | RPA2 | Affinity Capture-MS | 27940557 | 9606 | 9606 | BIOGRID |
| RBBP8 | NBN | Affinity Capture-Western | 27940557 | 9606 | 9606 | BIOGRID |
| RBBP8 | RAD50 | Affinity Capture-Western | 27940557 | 9606 | 9606 | BIOGRID |
| RBBP8 | WDHD1 | Affinity Capture-Western | 27940557 | 9606 | 9606 | BIOGRID |
| RBBP8 | RBBP8 | Affinity Capture-Western | 22544744 | 9606 | 9606 | BIOGRID |
| RBBP8 | RBL2 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| RBBP8 | CTBP1 | Affinity Capture-Western | 31636387 | 9606 | 9606 | BIOGRID |
| RBBP8 | BRCA1 | Affinity Capture-Western | 31636387 | 9606 | 9606 | BIOGRID |
| RBBP8 | CTBP1 | Co-localization | 31636387 | 9606 | 9606 | BIOGRID |
| RBBP8 | BRCA1 | Co-localization | 31636387 | 9606 | 9606 | BIOGRID |
| RBBP8 | HDAC2 | Affinity Capture-Western | 31636387 | 9606 | 9606 | BIOGRID |
| RBBP8 | CTBP1 | Affinity Capture-MS | 31636387 | 9606 | 9606 | BIOGRID |
| RBBP8 | SDCBP | Affinity Capture-MS | 31636387 | 9606 | 9606 | BIOGRID |
| RBBP8 | DHX16 | Affinity Capture-MS | 31636387 | 9606 | 9606 | BIOGRID |
| RBBP8 | BRCA1 | Affinity Capture-MS | 31636387 | 9606 | 9606 | BIOGRID |
| RBBP8 | HDAC2 | Affinity Capture-MS | 31636387 | 9606 | 9606 | BIOGRID |
| RBBP8 | GPKOW | Affinity Capture-MS | 31636387 | 9606 | 9606 | BIOGRID |
| RBBP8 | PCMT1 | Affinity Capture-MS | 31636387 | 9606 | 9606 | BIOGRID |
| RBBP8 | HSPA5 | Affinity Capture-MS | 31636387 | 9606 | 9606 | BIOGRID |
| RBBP8 | EEF1A1 | Affinity Capture-MS | 31636387 | 9606 | 9606 | BIOGRID |
| RBBP8 | CTBP2 | Affinity Capture-MS | 31636387 | 9606 | 9606 | BIOGRID |
| RBBP8 | HSP90AB1 | Affinity Capture-MS | 31636387 | 9606 | 9606 | BIOGRID |
| RBBP8 | PRKDC | Affinity Capture-MS | 31636387 | 9606 | 9606 | BIOGRID |
| RBBP8 | PDLIM7 | Affinity Capture-MS | 31636387 | 9606 | 9606 | BIOGRID |
| RBBP8 | XRCC6 | Affinity Capture-MS | 31636387 | 9606 | 9606 | BIOGRID |
| RBBP8 | ZNF217 | Affinity Capture-MS | 31636387 | 9606 | 9606 | BIOGRID |
| RBBP8 | SAPCD2 | Affinity Capture-MS | 31636387 | 9606 | 9606 | BIOGRID |
| RBBP8 | AP3B1 | Affinity Capture-MS | 31636387 | 9606 | 9606 | BIOGRID |
| RBBP8 | RAD50 | Affinity Capture-MS | 31636387 | 9606 | 9606 | BIOGRID |
| RBBP8 | PBX3 | Affinity Capture-MS | 31636387 | 9606 | 9606 | BIOGRID |
| RBBP8 | TAX1BP3 | Affinity Capture-MS | 31636387 | 9606 | 9606 | BIOGRID |
| RBBP8 | CTNNA2 | Affinity Capture-MS | 31636387 | 9606 | 9606 | BIOGRID |
| RBBP8 | HIST1H4L | Affinity Capture-MS | 31636387 | 9606 | 9606 | BIOGRID |
| RBBP8 | MRE11A | Affinity Capture-MS | 31636387 | 9606 | 9606 | BIOGRID |
Annotation of RBBP8
TCGA cancer survival map of RBBP8
Expression of RBBP8
Disease information of RBBP8