TcoF overview
TcoF: RBPMS
GeneID: 9604
Name: HCG2043421, isoform CRA_c
Ensembl: ENSG00000157110
Species: Human
Class: class HC
Family: RNA binding protein
Disease: 0
Go term: 13
Pathway: --
Hallmark: --
Super Enhancer:

chr8:30172098-30198480 chr8:30382813-30430778 chr8:30239915-30300556 chr8:30353152-30426143 chr8:30259380-30309769 chr8:30326441-30434015 chr8:30240902-30310590 chr8:30241227-30265851 chr8:30390010-30404104 chr8:30280229-30300764 chr8:30243090-30263584 chr8:30396056-30400814 chr8:30293909-30306046 chr8:30239466-30285596 chr8:30326326-30409149 chr8:30239521-30308283 chr8:30241089-30263708 chr8:30249982-30254958 chr8:30242303-30263504 chr8:30397323-30405725 chr8:30241094-30266004 chr8:30397106-30407397 chr8:30374502-30422664 chr8:30383108-30429463 chr8:30241895-30266675 chr8:30320265-30362411 chr8:30383055-30427306 chr8:30247722-30263249 chr8:30388592-30407313 chr8:30391986-30429263 chr8:30406353-30422529 chr8:30397295-30434087 chr8:30244203-30285539 chr8:30374539-30422625 chr8:30326377-30427516 chr8:30240425-30306891 chr8:30374998-30427588 chr8:30326344-30427101 chr8:30240092-30308556 chr8:30320982-30361404 chr8:30253087-30274163 chr8:30247174-30263710 chr8:30290228-30300800 chr8:30240622-30263820 chr8:30279595-30313430 chr8:30268982-30310545 chr8:30374725-30422759 chr8:30242181-30291599 chr8:30272052-30313605 chr8:30240832-30256962 chr8:30382849-30433377 chr8:30241037-30363096 chr8:30240232-30427671 chr8:30388675-30430140 chr8:30239184-30375944 chr8:30388678-30434212 chr8:30240967-30310426 chr8:30239955-30367413 chr8:30388877-30427587 chr8:30239697-30297650 chr8:30388120-30427412 chr8:30239636-30311997 chr8:30325628-30364554 chr8:30397067-30433697 chr8:30239779-30307262 chr8:30357493-30427331 chr8:30239342-30367930 chr8:30247660-30265328 chr8:30396060-30415501 chr8:30239961-30263439 chr8:30389967-30406181 chr8:30382839-30432777 chr8:30246094-30257367 chr8:30239932-30311021 chr8:30396188-30407295 chr8:30239630-30285358 chr8:30388511-30413474 chr8:30240014-30422319 chr8:30239951-30264145 chr8:30283103-30300926 chr8:30395791-30402437 chr8:30269311-30300729 chr8:30351375-30423145 chr8:30240045-30249781 chr8:30239789-30250676 chr8:30240341-30306553 chr8:30242570-30264024 chr8:30279884-30301020 chr8:30390167-30407257 chr8:30279947-30360642 chr8:30242756-30264386 chr8:30388554-30405699 chr8:30248010-30260500 chr8:30290140-30300664 chr8:30242592-30320858 chr8:30350589-30392290 chr8:30352126-30413921 chr8:30253819-30275547 chr8:30304747-30402309 chr8:30239867-30291930 chr8:30239638-30264835 chr8:30239640-30264949 chr8:30388498-30403426 chr8:30279696-30309037 chr8:30279940-30413666 chr8:30239969-30364382 chr8:30223807-30427490 chr8:30242187-30291043 chr8:30252067-30290700 chr8:30320945-30360354 chr8:30239478-30427394 chr8:30388487-30390690 chr8:30387567-30401040 chr8:30355828-30391823 chr8:30387606-30400966 chr8:30326050-30362015 chr8:30251755-30299150 chr8:30326176-30360084 chr8:30388425-30409849 chr8:30356440-30414255 chr8:30239696-30311847 chr8:30352674-30412855 chr8:30220714-30306708 chr8:30223528-30294611 chr8:30239983-30275636 chr8:30389230-30402236 chr8:30263515-30309345 chr8:30401696-30414097 chr8:30261232-30362367 chr8:30375486-30403382 chr8:30381845-30407102 chr8:30235798-30255444 chr8:30355852-30390058 chr8:30247539-30264024 chr8:30240686-30256578 chr8:30241064-30255984 chr8:30239744-30324357 chr8:30237639-30368168 chr8:30381408-30427099 chr8:30241293-30257278 chr8:30239682-30438856 chr8:30239218-30459027 chr8:30239780-30463192 chr8:30239550-30448350 chr8:30239720-30459112 chr8:30239340-30463038 chr8:30239294-30455195 chr8:30239350-30478236 chr8:30239798-30459194 chr8:30239368-30463463 chr8:30239489-30459002 chr8:30239619-30448852 chr8:30161084-30187339 chr8:30135157-30144533 chr8:30135754-30146257

Enhancer:

chr8:30335350-30336830 chr8:30512060-30513050 chr8:30513240-30515480 chr8:30583100-30585040 chr8:30418730-30419460 chr8:30250980-30251240 chr8:30252660-30252950 chr8:30253010-30253960 chr8:30257280-30257920 chr8:30396100-30396620 chr8:30396690-30397090 chr8:30397370-30398510 chr8:29847420-29849630 chr8:30567420-30569570 chr8:29610650-29612150 chr8:29612260-29613330 chr8:29613580-29615150 chr8:29626940-29629290 chr8:29634680-29636880 chr8:29637280-29638650 chr8:29684330-29685920 chr8:29760760-29761880 chr8:29761950-29763460 chr8:29766390-29768700 chr8:29828930-29830210 chr8:29882390-29883930 chr8:29938180-29940360 chr8:30289770-30291310 chr8:30324370-30325370 chr8:30332890-30333620 chr8:30356540-30357170 chr8:30361570-30361800 chr8:30419670-30421810 chr8:30436560-30437790 chr8:30546840-30547230 chr8:30601800-30603950 chr8:30944930-30945290 chr8:30325750-30327800 chr8:29876420-29878660 chr8:30268250-30270200 chr8:30274260-30274560 chr8:30283810-30285490 chr8:30352770-30354960 chr8:29916370-29918120 chr8:30342370-30344260 chr8:29953040-29955300 chr8:29993220-29994780 chr8:30305520-30307400 chr8:30307790-30308300 chr8:30314220-30316620 chr8:29998180-30000660 chr8:30480530-30481400 chr8:30502090-30502790 chr8:30539580-30541600 chr8:30098020-30098600 chr8:30196000-30197980 chr8:30366680-30367390 chr8:30367560-30367840 chr8:30388440-30390140 chr8:30437970-30438660 chr8:30557650-30559110 chr8:30560120-30560600 chr8:30560760-30561010 chr8:30573460-30574480 chr8:30390630-30393040 chr8:29591760-29592460 chr8:29592540-29593350 chr8:29615190-29616040 chr8:29937500-29937750 chr8:29937860-29938150 chr8:30421850-30423770 chr8:30180760-30182860 chr8:30248450-30250530 chr8:30133370-30134770 chr8:29596850-29597090 chr8:29654090-29654350 chr8:29710270-29711480 chr8:29718680-29720260 chr8:29869730-29870360 chr8:29890810-29893060 chr8:29893510-29893670 chr8:29894030-29895020 chr8:29945720-29947920 chr8:30136460-30138620 chr8:30247920-30248200 chr8:30261910-30263690 chr8:30264460-30266050 chr8:30294860-30297310 chr8:30297510-30297840 chr8:30298530-30300750 chr8:30320350-30322580 chr8:30344390-30344880 chr8:30405040-30407010 chr8:30030920-30032600 chr8:30572540-30573290 chr8:30409460-30410850 chr8:30013920-30016390 chr8:30293840-30294520 chr8:30221260-30222510

Promoter:

chr8:30242027-30429773

 ChIP-seq based regulatory details of RBPMS
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
 Downstream target genes of RBPMS
 Protein-protein interaction of RBPMS
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
RBPMS STRBP Two-hybrid 16189514 9606 9606 BIOGRID
RBPMS DTX2 Two-hybrid 16189514 9606 9606 BIOGRID
RBPMS TOLLIP Two-hybrid 16189514 9606 9606 BIOGRID
RBPMS LZTS2 Two-hybrid 16189514 9606 9606 BIOGRID
RBPMS ZC3H10 Two-hybrid 16189514 9606 9606 BIOGRID
RBPMS RHOXF2 Two-hybrid 16189514 9606 9606 BIOGRID
RBPMS CDC42EP1 Two-hybrid 16189514 9606 9606 BIOGRID
RBPMS C1orf94 Two-hybrid 16189514 9606 9606 BIOGRID
RBPMS RABL6 Two-hybrid 16189514 9606 9606 BIOGRID
RBPMS RBPMS Two-hybrid 16189514 9606 9606 BIOGRID
RBPMS ARHGEF39 Two-hybrid 16189514 9606 9606 BIOGRID
RBPMS ZNF581 Two-hybrid 16189514 9606 9606 BIOGRID
RBPMS GSE1 Two-hybrid 16189514 9606 9606 BIOGRID
RBPMS CCER1 Two-hybrid 16189514 9606 9606 BIOGRID
RBPMS TEX37 Two-hybrid 16189514 9606 9606 BIOGRID
RBPMS FAM103A1 Two-hybrid 16189514 9606 9606 BIOGRID
RBPMS ARHGAP9 Two-hybrid 16189514 9606 9606 BIOGRID
RBPMS RBFOX2 Two-hybrid 16189514 9606 9606 BIOGRID
RBPMS SMUG1 Two-hybrid 16189514 9606 9606 BIOGRID
RBPMS NEU4 Two-hybrid 16189514 9606 9606 BIOGRID
RBPMS HEYL Two-hybrid 16189514 9606 9606 BIOGRID
RBPMS CNNM3 Two-hybrid 16189514 9606 9606 BIOGRID
RBPMS ENKD1 Two-hybrid 16189514 9606 9606 BIOGRID
RBPMS SMUG1 Affinity Capture-Western 16189514 9606 9606 BIOGRID
RBPMS RBPMS Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS TUSC2 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS RHOBTB3 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS R3HDM2 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS POGZ Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS FAM168A Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS HEY2 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS RUSC1 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS PGLS Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS LINC00588 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS HEYL Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS ZBTB32 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS VENTX Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS EFEMP2 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS DCAF8 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS FOXP3 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS CRBN Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS PLAC8 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS IP6K2 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS ZNF581 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS MYOZ2 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS TOLLIP Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS RBFOX1 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS KCTD9 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS BANP Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS PIH1D1 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS VPS37C Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS WDYHV1 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS STRBP Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS GPATCH2L Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS NYNRIN Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS SEMA4G Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS INIP Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS DMRT3 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS TINAGL1 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS BOLL Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS C20orf195 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS FAM124B Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS DOK3 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS FBXL18 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS SBF2 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS YPEL3 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS WDR54 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS DCTN5 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS RHOXF2 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS LINC01547 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS C9orf24 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS ZC3H10 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS C1orf94 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS FBF1 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS LONRF1 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS RIPPLY1 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS HNRNPLL Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS NAPRT Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS DTX2 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS ZNF488 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS PRR20A Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS LRRC75A-AS1 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS C22orf39 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS NEU4 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS GLYCTK Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS LOC142937 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS RDH12 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS SPATA8 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS MGAT5B Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS LOC148413 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS DCDC2B Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS SH3RF2 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS ATP6V0E2 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS TOR1AIP2 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS PAPD4 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS WDR90 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS TEX37 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS ZNF385C Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS DOK6 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS TTLL10 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS CSNK1G2-AS1 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS BCL6B Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS LINC01588 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS LINC00482 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS LINC00908 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS C1orf111 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS RTP5 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS KRTAP8-1 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS KRTAP23-1 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS KRTAP19-5 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS KRTAP19-7 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS KRTAP12-2 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS INCA1 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS VHLL Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS C11orf87 Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS LGALS9C Two-hybrid 25416956 9606 9606 BIOGRID
RBPMS SPATA8 Two-hybrid 21516116 9606 9606 BIOGRID
RBPMS MGAT5B Two-hybrid 21516116 9606 9606 BIOGRID
RBPMS RBM46 Two-hybrid 21516116 9606 9606 BIOGRID
RBPMS RAD54L2 Two-hybrid 21516116 9606 9606 BIOGRID
RBPMS FRG1 Two-hybrid 21516116 9606 9606 BIOGRID
RBPMS GATAD2B Two-hybrid 21516116 9606 9606 BIOGRID
RBPMS RBPMS2 Affinity Capture-MS 28514442 9606 9606 BIOGRID
RBPMS GSTZ1 Affinity Capture-MS 28514442 9606 9606 BIOGRID
RBPMS QKI Two-hybrid 30217970 9606 9606 BIOGRID
RBPMS RBFOX2 Two-hybrid 30217970 9606 9606 BIOGRID
RBPMS DMRTB1 Two-hybrid 30217970 9606 9606 BIOGRID
RBPMS RBPMS Two-hybrid 27107012 9606 9606 BIOGRID
RBPMS RUSC1 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS PRR35 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS ATXN7L2 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS MSX1 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS RAD54L2 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS PITX2 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS TSC1 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS RBPMS2 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS VPS37C Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS CNNM3 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS TMEM42 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS ZNF581 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS TCEA2 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS TEX37 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS TSGA10IP Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS TSPYL6 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS RPP25 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS GATA2 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS KRTAP11-1 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS NKX2-5 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS DAZAP2 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS KRTAP19-1 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS C11orf87 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS KRTAP15-1 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS KRTAP19-5 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS KRTAP12-1 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS C19orf54 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS VHLL Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS ZNF34 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS INCA1 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS ARID5A Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS KRTAP26-1 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS PRR20B Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS PRR20A Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS VGLL3 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS KRTAP3-1 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS KRTAP12-4 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS FAM166B Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS C10orf55 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS PRR20D Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS PRR20C Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS PRR20E Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS KRTAP13-3 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS PSG11 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS KRTAP19-3 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS KRTAP19-7 Two-hybrid 32296183 9606 9606 BIOGRID
RBPMS Hoxa1 Affinity Capture-Western 23088713 9606 10090 BIOGRID
 Annotation of RBPMS
 TCGA cancer survival map of RBPMS


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  RBPMS