TcoF overview
| TcoF: | RPRD1A | |
| GeneID: | 9252 | |
| Name: | Regulation of nuclear pre-mRNA domain-containing protein 1A | |
| Ensembl: | ENSG00000141425 | |
| Species: | Human | |
| Class: | class HC | |
| Family: | Others | |
| Disease: | 1 | |
| Go term: | 7 | |
| Pathway: | 1 | |
| Hallmark: | -- | |
| Super Enhancer: |
chr18:33674232-33714439 chr18:33596754-33616915 |
|
| Enhancer: |
chr18:33767640-33769590 chr18:33734960-33736420 chr18:33736620-33738790 chr18:33552870-33554850 chr18:33780290-33781570 chr18:33785240-33785590 chr18:33892050-33893240 chr18:33888310-33890660 chr18:34020100-34022330 chr18:33729050-33730830 chr18:33585140-33585550 chr18:33541720-33543920 chr18:33562080-33564480 chr18:33658620-33660460 chr18:33790810-33793290 chr18:33966130-33968000 chr18:34033890-34034640 chr18:34062040-34064410 chr18:33742270-33743810 chr18:33843820-33845860 chr18:33326690-33327330 chr18:33973360-33975720 chr18:33978170-33980040 chr18:34031210-34032350 chr18:34033210-34033840 chr18:33934770-33935500 chr18:33944290-33946140 chr18:34111540-34113120 chr18:34252240-34253660 chr18:34277080-34278570 chr18:33454600-33456630 chr18:33198680-33200570 chr18:34047320-34048960 chr18:33749940-33750020 chr18:33614610-33616500 chr18:33957470-33958570 chr18:34003590-34005300 chr18:34025470-34027660 chr18:34213630-34215760 |
|
| Promoter: |
chr18:33564350-33647539 |
ChIP-seq based regulatory details of RPRD1A
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|
Downstream target genes of RPRD1A
Upstream regulatory details of RPRD1A
Protein-protein interaction of RPRD1A
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| RPRD1A | YWHAZ | Two-hybrid | 21988832 | 9606 | 9606 | BIOGRID |
| RPRD1A | KDM1A | Two-hybrid | 23455924 | 9606 | 9606 | BIOGRID |
| RPRD1A | ANKMY2 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| RPRD1A | HSF1 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| RPRD1A | NPLOC4 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| RPRD1A | PLIN3 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| RPRD1A | DPH2 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| RPRD1A | DXO | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| RPRD1A | MITD1 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| RPRD1A | VPS37B | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| RPRD1A | PTRF | Affinity Capture-MS | 27173435 | 9606 | 9606 | BIOGRID |
| RPRD1A | CCDC132 | Affinity Capture-MS | 27173435 | 9606 | 9606 | BIOGRID |
| RPRD1A | PKN3 | Affinity Capture-MS | 27173435 | 9606 | 9606 | BIOGRID |
| RPRD1A | RABGEF1 | Affinity Capture-MS | 27173435 | 9606 | 9606 | BIOGRID |
| RPRD1A | LONRF1 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| RPRD1A | NXF1 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| RPRD1A | FAM90A1 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| RPRD1A | HGS | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| RPRD1A | POLR2L | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1A | POLR2M | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1A | RPAP2 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1A | RPRD2 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1A | KDM2A | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1A | POLR3E | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1A | POLR3H | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1A | CRCP | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1A | PDRG1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1A | SCAF4 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1A | PFDN2 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1A | POLR3K | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1A | SUPT6H | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1A | RNGTT | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
Annotation of RPRD1A
TCGA cancer survival map of RPRD1A
Expression of RPRD1A
Disease information of RPRD1A