TcoF overview
TcoF: RPRD1A
GeneID: 9252
Name: Regulation of nuclear pre-mRNA domain-containing protein 1A
Ensembl: ENSG00000141425
Species: Human
Class: class HC
Family: Others
Disease: 1
Go term: 7
Pathway: 1
Hallmark: --
Super Enhancer:

chr18:33674232-33714439 chr18:33596754-33616915

--
Enhancer:

chr18:33767640-33769590 chr18:33734960-33736420 chr18:33736620-33738790 chr18:33552870-33554850 chr18:33780290-33781570 chr18:33785240-33785590 chr18:33892050-33893240 chr18:33888310-33890660 chr18:34020100-34022330 chr18:33729050-33730830 chr18:33585140-33585550 chr18:33541720-33543920 chr18:33562080-33564480 chr18:33658620-33660460 chr18:33790810-33793290 chr18:33966130-33968000 chr18:34033890-34034640 chr18:34062040-34064410 chr18:33742270-33743810 chr18:33843820-33845860 chr18:33326690-33327330 chr18:33973360-33975720 chr18:33978170-33980040 chr18:34031210-34032350 chr18:34033210-34033840 chr18:33934770-33935500 chr18:33944290-33946140 chr18:34111540-34113120 chr18:34252240-34253660 chr18:34277080-34278570 chr18:33454600-33456630 chr18:33198680-33200570 chr18:34047320-34048960 chr18:33749940-33750020 chr18:33614610-33616500 chr18:33957470-33958570 chr18:34003590-34005300 chr18:34025470-34027660 chr18:34213630-34215760

--
Promoter:

chr18:33564350-33647539

False
 ChIP-seq based regulatory details of RPRD1A
select * from encode where Experiment_target='RPRD1A'
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
 Downstream target genes of RPRD1A
 Protein-protein interaction of RPRD1A
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
RPRD1A YWHAZ Two-hybrid 21988832 9606 9606 BIOGRID
RPRD1A KDM1A Two-hybrid 23455924 9606 9606 BIOGRID
RPRD1A ANKMY2 Co-fractionation 22863883 9606 9606 BIOGRID
RPRD1A HSF1 Co-fractionation 22863883 9606 9606 BIOGRID
RPRD1A NPLOC4 Co-fractionation 22863883 9606 9606 BIOGRID
RPRD1A PLIN3 Co-fractionation 22863883 9606 9606 BIOGRID
RPRD1A DPH2 Co-fractionation 26344197 9606 9606 BIOGRID
RPRD1A DXO Co-fractionation 26344197 9606 9606 BIOGRID
RPRD1A MITD1 Co-fractionation 26344197 9606 9606 BIOGRID
RPRD1A VPS37B Co-fractionation 26344197 9606 9606 BIOGRID
RPRD1A PTRF Affinity Capture-MS 27173435 9606 9606 BIOGRID
RPRD1A CCDC132 Affinity Capture-MS 27173435 9606 9606 BIOGRID
RPRD1A PKN3 Affinity Capture-MS 27173435 9606 9606 BIOGRID
RPRD1A RABGEF1 Affinity Capture-MS 27173435 9606 9606 BIOGRID
RPRD1A LONRF1 Two-hybrid 32296183 9606 9606 BIOGRID
RPRD1A NXF1 Two-hybrid 32296183 9606 9606 BIOGRID
RPRD1A FAM90A1 Two-hybrid 32296183 9606 9606 BIOGRID
RPRD1A HGS Two-hybrid 32296183 9606 9606 BIOGRID
RPRD1A POLR2L Affinity Capture-MS 24981860 9606 9606 BIOGRID
RPRD1A POLR2M Affinity Capture-MS 24981860 9606 9606 BIOGRID
RPRD1A RPAP2 Affinity Capture-MS 24981860 9606 9606 BIOGRID
RPRD1A RPRD2 Affinity Capture-MS 24981860 9606 9606 BIOGRID
RPRD1A KDM2A Affinity Capture-MS 24981860 9606 9606 BIOGRID
RPRD1A POLR3E Affinity Capture-MS 24981860 9606 9606 BIOGRID
RPRD1A POLR3H Affinity Capture-MS 24981860 9606 9606 BIOGRID
RPRD1A CRCP Affinity Capture-MS 24981860 9606 9606 BIOGRID
RPRD1A PDRG1 Affinity Capture-MS 24981860 9606 9606 BIOGRID
RPRD1A SCAF4 Affinity Capture-MS 24981860 9606 9606 BIOGRID
RPRD1A PFDN2 Affinity Capture-MS 24981860 9606 9606 BIOGRID
RPRD1A POLR3K Affinity Capture-MS 24981860 9606 9606 BIOGRID
RPRD1A SUPT6H Affinity Capture-MS 24981860 9606 9606 BIOGRID
RPRD1A RNGTT Affinity Capture-MS 24981860 9606 9606 BIOGRID
 Annotation of RPRD1A
 TCGA cancer survival map of RPRD1A


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  RPRD1A