TcoF overview
| TcoF: | RPRD1B | |
| GeneID: | 57521 | |
| Name: | Regulation of nuclear pre-mRNA domain-containing protein 1B | |
| Ensembl: | ENSG00000101413 | |
| Species: | Human | |
| Class: | class HC | |
| Family: | Others | |
| Disease: | 0 | |
| Go term: | 11 | |
| Pathway: | 1 | |
| Hallmark: | -- | |
| Super Enhancer: |
chr20:36597647-36622575 chr20:36610120-36626510 chr20:36604854-36622545 chr20:36610087-36624857 chr20:36614946-36622581 chr20:36611467-36637203 chr20:36596470-36638808 chr20:36596465-36624343 chr20:36611382-36622741 chr20:36596643-36638295 chr20:36611382-36636985 chr20:36596518-36621534 chr20:36597151-36622768 chr20:36615382-36630759 chr20:36700896-36756851 chr20:36718214-36724880 chr20:36695053-36721249 chr20:36688106-36726120 chr20:36695443-36756529 chr20:36702018-36724146 chr20:36701409-36756137 chr20:36719662-36739368 chr20:36711189-36714649 chr20:36685151-36735520 chr20:36711950-36723917 chr20:36688924-36724852 chr20:36709205-36724662 chr20:36648787-36754306 chr20:36651674-36724373 chr20:36660094-36664246 chr20:36660333-36687026 |
|
| Enhancer: |
chr20:36686050-36687790 chr20:36768060-36769680 chr20:36845880-36846640 chr20:36851000-36851930 chr20:36888760-36888890 chr20:36846770-36848030 chr20:36645200-36647400 chr20:36599840-36600780 chr20:36643820-36645140 chr20:36622890-36624770 chr20:36609090-36609330 chr20:36353990-36355700 chr20:36355800-36356760 chr20:36766790-36767810 chr20:36769790-36770460 chr20:36026260-36028510 chr20:36782630-36784240 chr20:36808390-36810820 chr20:36811790-36813350 chr20:37023220-37024340 chr20:36814620-36816890 chr20:36721930-36724410 chr20:36691800-36692900 chr20:36759630-36760740 chr20:36854180-36855550 chr20:36855640-36856540 chr20:36957680-36959440 chr20:36997810-36999380 chr20:36666830-36668830 chr20:36628940-36631020 chr20:36651380-36653590 chr20:36749920-36752400 chr20:36823720-36825530 chr20:36907860-36909150 chr20:36305490-36306350 chr20:36329870-36330710 chr20:36612040-36613460 chr20:36859730-36860750 chr20:36988040-36989350 chr20:36740560-36740980 chr20:36758770-36759490 chr20:36760900-36762050 chr20:36770600-36770920 chr20:36778130-36779340 chr20:36787960-36789390 chr20:36789400-36789820 chr20:36790000-36790900 chr20:37046160-37048640 chr20:37087980-37089460 chr20:37176100-37177330 chr20:37177440-37179710 chr20:37233230-37235480 chr20:37257650-37258140 chr20:37377500-37378650 chr20:37042550-37044980 chr20:36483040-36484870 chr20:36485300-36486460 chr20:36845050-36845650 chr20:36914530-36916750 chr20:36936080-36937330 chr20:37219230-37219650 chr20:36674730-36676120 chr20:36703400-36705320 chr20:36791120-36793590 chr20:36698070-36698960 chr20:36508860-36511090 chr20:36542880-36544130 chr20:36819430-36820580 chr20:36535150-36537040 chr20:36632420-36633520 |
|
| Promoter: |
chr20:36662127-36756182 |
ChIP-seq based regulatory details of RPRD1B
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|
Downstream target genes of RPRD1B
Upstream regulatory details of RPRD1B
Protein-protein interaction of RPRD1B
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| RPRD1B | AARSD1 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| RPRD1B | ARPC4 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| RPRD1B | BAG1 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| RPRD1B | FUBP1 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| RPRD1B | GRPEL1 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| RPRD1B | LPP | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| RPRD1B | NIF3L1 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| RPRD1B | NPLOC4 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| RPRD1B | OGT | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| RPRD1B | OSGEP | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| RPRD1B | PFDN5 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| RPRD1B | PPP1R12A | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| RPRD1B | RANGAP1 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| RPRD1B | RPA1 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| RPRD1B | SAE1 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| RPRD1B | STAT5B | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| RPRD1B | TP53RK | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| RPRD1B | TTLL12 | Co-fractionation | 22863883 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2E | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2G | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| RPRD1B | CTDP1 | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| RPRD1B | RPAP2 | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2A | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2M | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| RPRD1B | RPRD1A | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2D | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| RPRD1B | RPRD2 | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| RPRD1B | RECQL5 | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2B | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2J | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| RPRD1B | SUPT6H | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2I | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2C | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| RPRD1B | GPN3 | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2L | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2F | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| RPRD1B | ATP6V1B2 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| RPRD1B | KPNB1 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| RPRD1B | SRM | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| RPRD1B | RPRD1A | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2M | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| RPRD1B | RPRD2 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2G | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| RPRD1B | CTDP1 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| RPRD1B | RECQL5 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| RPRD1B | RPAP2 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2J | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2A | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2I | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| RPRD1B | GPN3 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2L | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| RPRD1B | SUPT6H | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2E | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2B | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2C | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| RPRD1B | GPN1 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| RPRD1B | RPRD1B | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| RPRD1B | NUTF2 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| RPRD1B | UBE2I | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| RPRD1B | TNPO2 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| RPRD1B | CDCA8 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| RPRD1B | HMG20A | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| RPRD1B | RPRD1A | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| RPRD1B | DDIT4L | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| RPRD1B | BIN3 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| RPRD1B | VAX1 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| RPRD1B | RASSF3 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| RPRD1B | VPS37C | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| RPRD1B | HOXC4 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| RPRD1B | PFDN6 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| RPRD1B | PIP4K2B | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| RPRD1B | RPRD1A | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2I | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2D | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2G | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2J | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2A | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2B | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2M | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2L | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | RPRD2 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | RPAP2 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2K | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR1C | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR1A | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | RECQL5 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | URI1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR1B | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR1D | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | NEDD4 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | RPAP3 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR3E | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR3A | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | DPF2 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR3H | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR3B | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | PIH1D1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | SUMO2 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR2F | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | CALM1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | MARCKS | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | TRIM24 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | CRCP | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | ANXA5 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | POLR1E | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | SOD1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | SCAF1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | BASP1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | PDIA4 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | PDRG1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | CD3EAP | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | UXT | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | GPN1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | EPAS1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | CALR | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | BCL7A | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | STMN1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | PTMS | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | SCAF4 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | BCL7B | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | PFDN2 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | ARID1B | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | PFN1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| RPRD1B | MED10 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
Annotation of RPRD1B
TCGA cancer survival map of RPRD1B
Expression of RPRD1B
Disease information of RPRD1B