TcoF overview
TcoF: RRN3
GeneID: 6294
Name: RNA polymerase I-specific transcription initiation factor RRN3
Ensembl: ENSG00000085721
Species: Human
Class: class 2
Family: Others
Disease: 0
Go term: 16
Pathway: 4
Hallmark: 2
Super Enhancer:

chr16:15236554-15258954 chr16:15107157-15150157 chr16:15234314-15259428 chr16:15234242-15258928 chr16:15235800-15258779 chr16:15234808-15259311 chr16:15235755-15259046

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Enhancer:

chr16:14916930-14918490 chr16:15005770-15006230 chr16:15247600-15248700 chr16:15128410-15129300 chr16:15176580-15177290 chr16:15120560-15122730 chr16:14932350-14933750 chr16:14946440-14947320 chr16:15111020-15111170 chr16:15111280-15112690 chr16:15134980-15135470 chr16:15135530-15136140 chr16:15165110-15166800 chr16:15069080-15071560 chr16:15107300-15109180 chr16:15118410-15120280 chr16:15536080-15536640 chr16:15578500-15579170 chr16:15582580-15584870 chr16:15586090-15586630 chr16:15586700-15588730 chr16:15600440-15602420 chr16:15596230-15597950 chr16:15100440-15102210 chr16:15110070-15110970 chr16:15116610-15118300 chr16:15127260-15128140 chr16:15129410-15129870 chr16:15123660-15123800 chr16:15123910-15124130 chr16:14763120-14764200 chr16:14764820-14766400 chr16:15073960-15075690 chr16:15082470-15083160 chr16:15548680-15550150 chr16:15575260-15577490 chr16:15072180-15073890 chr16:15128240-15128310 chr16:15090360-15090920 chr16:15399770-15400060 chr16:14729130-14731340 chr16:15632970-15633540 chr16:15114640-15116560 chr16:15603250-15605300

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Promoter:

chr16:15153879-15188174

False
 ChIP-seq based regulatory details of RRN3
select * from encode where Experiment_target='RRN3'
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
 Downstream target genes of RRN3
 Protein-protein interaction of RRN3
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
RRN3 POLR1A Affinity Capture-Western 11250903 9606 9606 BIOGRID
RRN3 TBP Affinity Capture-Western 11250903 9606 9606 BIOGRID
RRN3 TAF1B Affinity Capture-Western 11250903 9606 9606 BIOGRID
RRN3 UBTF Affinity Capture-Western 11250903 9606 9606 BIOGRID
RRN3 TAF1B Reconstituted Complex 11250903 9606 9606 BIOGRID
RRN3 TAF1C Reconstituted Complex 11250903 9606 9606 BIOGRID
RRN3 TAF1A Reconstituted Complex 11250903 9606 9606 BIOGRID
RRN3 POLR1E Affinity Capture-Western 19214185 9606 9606 BIOGRID
RRN3 POLR1B Affinity Capture-Western 15558034 9606 9606 BIOGRID
RRN3 ACTA1 Affinity Capture-Western 15558034 9606 9606 BIOGRID
RRN3 MYO1C Affinity Capture-Western 15558034 9606 9606 BIOGRID
RRN3 PA2G4 Affinity Capture-Western 30793766 9606 9606 BIOGRID
RRN3 Polr1b Affinity Capture-Western 15004009 9606 10090 BIOGRID
RRN3 Eif3l Affinity Capture-Western 15004009 9606 10090 BIOGRID
RRN3 Polr1b Affinity Capture-Western 12393749 9606 10090 BIOGRID
RRN3 Trim28 Affinity Capture-Western 12393749 9606 10090 BIOGRID
RRN3 RPA43 Affinity Capture-Western 23393135 9606 559292 BIOGRID
RRN3 TAF12 Affinity Capture-Western 23393135 9606 559292 BIOGRID
 Annotation of RRN3
 TCGA cancer survival map of RRN3


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  RRN3