TcoF overview
TcoF: RUVBL1
GeneID: 10284
Name: RuvB-like 1
Ensembl: ENSG00000175792
Species: Human
Class: class 2
Family: Other_CRF
Disease: 0
Go term: 40
Pathway: 10
Hallmark: 2
Super Enhancer:

chr3:127770128-127799271 chr3:127885601-127961010 chr3:127790587-127814705 chr3:127793667-127802754 chr3:127769940-127844001

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Enhancer:

chr3:127840060-127842420 chr3:127771400-127771670 chr3:127816340-127817720 chr3:127817790-127819430 chr3:127786900-127788310 chr3:127797900-127799790 chr3:127800250-127801320 chr3:127482210-127482880 chr3:127507320-127508180 chr3:127771750-127773720 chr3:127794920-127797000 chr3:127306640-127307250 chr3:127566740-127569180 chr3:127485930-127488400 chr3:127774600-127775550 chr3:127540680-127541150 chr3:127492030-127493190 chr3:127493490-127495940 chr3:127526860-127528150 chr3:127554860-127556470 chr3:127563020-127564110 chr3:128090380-128092680 chr3:127490700-127491830 chr3:127829960-127831730 chr3:127831860-127833880 chr3:127648330-127648970 chr3:127307400-127309250 chr3:127317320-127318160 chr3:127391920-127393180 chr3:127419390-127421670 chr3:127489340-127490240 chr3:127500740-127501690 chr3:127517750-127520020 chr3:127520930-127521320 chr3:127521450-127523830 chr3:127608340-127610200 chr3:127779500-127781880 chr3:127385190-127386780 chr3:127860610-127861380 chr3:127421810-127422960 chr3:127437740-127438600 chr3:127511450-127512390 chr3:127533940-127534360 chr3:127269500-127271710 chr3:127532640-127533750 chr3:127679380-127681220 chr3:127243880-127245010 chr3:127318390-127318540 chr3:127447990-127450040 chr3:127480450-127482080 chr3:127525370-127525820 chr3:127572260-127572880 chr3:127720280-127721140 chr3:127893860-127894560 chr3:127935900-127938320 chr3:128034990-128037070 chr3:128051280-128053630 chr3:128054090-128054810 chr3:128056080-128056940 chr3:128074950-128077050 chr3:128085930-128086970 chr3:128087390-128089790 chr3:128096890-128098180 chr3:128098300-128098540 chr3:128103490-128105000 chr3:128277860-128280080 chr3:128304910-128306680 chr3:128310410-128311360 chr3:128445200-128446960 chr3:128447360-128447830 chr3:128500220-128502020 chr3:128525430-128526380 chr3:128105420-128107520 chr3:128367040-128369380 chr3:128415750-128418170 chr3:128057080-128059140 chr3:128673690-128675610 chr3:127786460-127786820 chr3:128241700-128243840 chr3:127299250-127299980 chr3:127348130-127350560 chr3:127358370-127359660 chr3:127913700-127915900 chr3:127993100-127994700 chr3:127926680-127927180 chr3:128485580-128486730 chr3:128496760-128498990 chr3:128511990-128514200 chr3:128285980-128288240 chr3:127954100-127955020 chr3:127956370-127957290 chr3:128270570-128271890

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Promoter:

chr3:127783621-127872757

False
 ChIP-seq based regulatory details of RUVBL1
select * from encode where Experiment_target='RUVBL1'
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
TcoF_00_20573 RUVBL1 cell line HepG2 GSM2574761 Liver Cistrome
TcoF_00_41103 RUVBL1 cell line Hep-G2 GSM2574761 Liver ReMap
TcoF_00_20578 RUVBL1 cell line HepG2 GSM2877264 Liver Cistrome
TcoF_00_40639 RUVBL1 cell line Hep-G2 GSM2877264 Liver ReMap
TcoF_00_20575 RUVBL1 cell line HepG2 GSM2877265 Liver Cistrome
 Downstream target genes of RUVBL1
 Protein-protein interaction of RUVBL1
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
RUVBL1 RUVBL2 Affinity Capture-MS 17353931 9606 9606 BIOGRID
RUVBL1 C2orf44 Affinity Capture-MS 17353931 9606 9606 BIOGRID
RUVBL1 FDFT1 Affinity Capture-MS 17353931 9606 9606 BIOGRID
RUVBL1 E2F7 Affinity Capture-MS 17353931 9606 9606 BIOGRID
RUVBL1 DPCD Affinity Capture-MS 17353931 9606 9606 BIOGRID
RUVBL1 CTNNB1 Affinity Capture-Western 9843967 9606 9606 BIOGRID
RUVBL1 CTNNB1 Reconstituted Complex 9843967 9606 9606 BIOGRID
RUVBL1 TBP Reconstituted Complex 9843967 9606 9606 BIOGRID
RUVBL1 LEF1 Affinity Capture-Western 9843967 9606 9606 BIOGRID
RUVBL1 EP400 Affinity Capture-Western 11509179 9606 9606 BIOGRID
RUVBL1 TRRAP Affinity Capture-Western 11839798 9606 9606 BIOGRID
RUVBL1 ACTL6A Affinity Capture-Western 11839798 9606 9606 BIOGRID
RUVBL1 KIAA1377 Two-hybrid 16169070 9606 9606 BIOGRID
RUVBL1 CCDC87 Affinity Capture-MS 17643375 9606 9606 BIOGRID
RUVBL1 PCBP2 Affinity Capture-MS 17643375 9606 9606 BIOGRID
RUVBL1 RUVBL2 Affinity Capture-MS 17643375 9606 9606 BIOGRID
RUVBL1 HSPA8 Affinity Capture-MS 17643375 9606 9606 BIOGRID
RUVBL1 NTPCR Affinity Capture-MS 17643375 9606 9606 BIOGRID
RUVBL1 ACTB Affinity Capture-MS 17643375 9606 9606 BIOGRID
RUVBL1 ACTG1 Affinity Capture-MS 17643375 9606 9606 BIOGRID
RUVBL1 C12orf45 Affinity Capture-MS 17643375 9606 9606 BIOGRID
RUVBL1 DDX42 Affinity Capture-MS 17643375 9606 9606 BIOGRID
RUVBL1 DPCD Affinity Capture-MS 17643375 9606 9606 BIOGRID
RUVBL1 CAPNS1 Affinity Capture-MS 17643375 9606 9606 BIOGRID
RUVBL1 KPNB1 Affinity Capture-MS 17643375 9606 9606 BIOGRID
RUVBL1 PIH1D1 Affinity Capture-MS 17643375 9606 9606 BIOGRID
RUVBL1 HSPA1L Affinity Capture-MS 17643375 9606 9606 BIOGRID
RUVBL1 ELAVL1 Affinity Capture-MS 17643375 9606 9606 BIOGRID
RUVBL1 DMAP1 Affinity Capture-MS 17643375 9606 9606 BIOGRID
RUVBL1 YEATS4 Affinity Capture-MS 17643375 9606 9606 BIOGRID
RUVBL1 TTI1 Affinity Capture-MS 17643375 9606 9606 BIOGRID
RUVBL1 PCBP1 Affinity Capture-MS 17643375 9606 9606 BIOGRID
RUVBL1 PCBP3 Affinity Capture-MS 17643375 9606 9606 BIOGRID
RUVBL1 SRI Affinity Capture-MS 17643375 9606 9606 BIOGRID
RUVBL1 RUVBL2 Affinity Capture-Western 19433865 9606 9606 BIOGRID
RUVBL1 H2AFX Affinity Capture-Western 18285460 9606 9606 BIOGRID
RUVBL1 RUVBL2 Affinity Capture-MS 18087039 9606 9606 BIOGRID
RUVBL1 CTNNB1 Affinity Capture-MS 18087039 9606 9606 BIOGRID
RUVBL1 UBE2I Affinity Capture-MS 18087039 9606 9606 BIOGRID
RUVBL1 EP400 Affinity Capture-MS 18087039 9606 9606 BIOGRID
RUVBL1 RUVBL2 Affinity Capture-Western 18087039 9606 9606 BIOGRID
RUVBL1 CTNNB1 Affinity Capture-Western 18087039 9606 9606 BIOGRID
RUVBL1 UBE2I Affinity Capture-Western 18087039 9606 9606 BIOGRID
RUVBL1 EP400 Affinity Capture-Western 18087039 9606 9606 BIOGRID
RUVBL1 AR Affinity Capture-Western 18087039 9606 9606 BIOGRID
RUVBL1 RORA Affinity Capture-Western 18087039 9606 9606 BIOGRID
RUVBL1 KAT5 Affinity Capture-Western 18087039 9606 9606 BIOGRID
RUVBL1 CREBBP Affinity Capture-Western 18087039 9606 9606 BIOGRID
RUVBL1 RARA Affinity Capture-Western 18087039 9606 9606 BIOGRID
RUVBL1 YY1 Affinity Capture-Western 18026119 9606 9606 BIOGRID
RUVBL1 FBL Reconstituted Complex 17636026 9606 9606 BIOGRID
RUVBL1 TAF9 Reconstituted Complex 17636026 9606 9606 BIOGRID
RUVBL1 RUVBL2 Reconstituted Complex 17636026 9606 9606 BIOGRID
RUVBL1 RUVBL2 Affinity Capture-MS 17721549 9606 9606 BIOGRID
RUVBL1 ACTL6A Affinity Capture-MS 17721549 9606 9606 BIOGRID
RUVBL1 INO80C Affinity Capture-MS 17721549 9606 9606 BIOGRID
RUVBL1 YY1 Affinity Capture-MS 17721549 9606 9606 BIOGRID
RUVBL1 INO80 Affinity Capture-MS 17721549 9606 9606 BIOGRID
RUVBL1 NFRKB Affinity Capture-MS 17721549 9606 9606 BIOGRID
RUVBL1 TFPT Affinity Capture-MS 17721549 9606 9606 BIOGRID
RUVBL1 ACTR8 Affinity Capture-MS 17721549 9606 9606 BIOGRID
RUVBL1 INO80B Affinity Capture-MS 17721549 9606 9606 BIOGRID
RUVBL1 INO80E Affinity Capture-MS 17721549 9606 9606 BIOGRID
RUVBL1 UCHL5 Affinity Capture-MS 17721549 9606 9606 BIOGRID
RUVBL1 INO80D Affinity Capture-MS 17721549 9606 9606 BIOGRID
RUVBL1 MCRS1 Affinity Capture-MS 17721549 9606 9606 BIOGRID
RUVBL1 RUVBL2 Reconstituted Complex 10966108 9606 9606 BIOGRID
RUVBL1 RUVBL2 Co-fractionation 22939629 9606 9606 BIOGRID
RUVBL1 TRRAP Co-fractionation 22939629 9606 9606 BIOGRID
RUVBL1 SRCAP Co-fractionation 22939629 9606 9606 BIOGRID
RUVBL1 VPS72 Co-fractionation 22939629 9606 9606 BIOGRID
RUVBL1 SMARCA5 Co-fractionation 22939629 9606 9606 BIOGRID
RUVBL1 SMARCA1 Co-fractionation 22939629 9606 9606 BIOGRID
RUVBL1 TMED9 Co-fractionation 22939629 9606 9606 BIOGRID
RUVBL1 ATP6V1B2 Co-fractionation 22939629 9606 9606 BIOGRID
RUVBL1 SRSF2 Co-fractionation 22939629 9606 9606 BIOGRID
RUVBL1 SMARCC2 Co-fractionation 22939629 9606 9606 BIOGRID
RUVBL1 HINT1 Reconstituted Complex 16014379 9606 9606 BIOGRID
RUVBL1 HINT1 Affinity Capture-Western 16014379 9606 9606 BIOGRID
RUVBL1 RUVBL1 Reconstituted Complex 16014379 9606 9606 BIOGRID
RUVBL1 TERT Affinity Capture-Western 18358808 9606 9606 BIOGRID
RUVBL1 TERC Affinity Capture-Western 18358808 9606 9606 BIOGRID
RUVBL1 DKC1 Affinity Capture-Western 18358808 9606 9606 BIOGRID
RUVBL1 RUVBL2 Affinity Capture-Western 18358808 9606 9606 BIOGRID
RUVBL1 RUVBL2 Reconstituted Complex 11080158 9606 9606 BIOGRID
RUVBL1 RUVBL2 Affinity Capture-Western 11080158 9606 9606 BIOGRID
RUVBL1 RUVBL1 Affinity Capture-Western 11080158 9606 9606 BIOGRID
RUVBL1 RUVBL2 Two-hybrid 10524211 9606 9606 BIOGRID
RUVBL1 PRKDC Affinity Capture-MS 20371770 9606 9606 BIOGRID
RUVBL1 TRRAP Affinity Capture-MS 20371770 9606 9606 BIOGRID
RUVBL1 TTI1 Affinity Capture-MS 20371770 9606 9606 BIOGRID
RUVBL1 TELO2 Affinity Capture-MS 20371770 9606 9606 BIOGRID
RUVBL1 RPAP3 Affinity Capture-MS 20371770 9606 9606 BIOGRID
RUVBL1 URI1 Affinity Capture-MS 20371770 9606 9606 BIOGRID
RUVBL1 HSPA4 Affinity Capture-MS 20371770 9606 9606 BIOGRID
RUVBL1 RUVBL1 Affinity Capture-MS 20371770 9606 9606 BIOGRID
RUVBL1 RUVBL2 Affinity Capture-MS 20371770 9606 9606 BIOGRID
RUVBL1 TUBA1A Affinity Capture-MS 20371770 9606 9606 BIOGRID
RUVBL1 TUBB Affinity Capture-MS 20371770 9606 9606 BIOGRID
RUVBL1 PIH1D1 Affinity Capture-MS 20371770 9606 9606 BIOGRID
RUVBL1 POLR2E Affinity Capture-MS 20371770 9606 9606 BIOGRID
RUVBL1 POLR2E Affinity Capture-Western 20371770 9606 9606 BIOGRID
RUVBL1 TTI1 Affinity Capture-Western 20371770 9606 9606 BIOGRID
RUVBL1 NCBP1 Affinity Capture-Western 20371770 9606 9606 BIOGRID
RUVBL1 PABPC1 Affinity Capture-Western 20371770 9606 9606 BIOGRID
RUVBL1 SMG1 Affinity Capture-Western 20371770 9606 9606 BIOGRID
RUVBL1 SMG8 Affinity Capture-Western 20371770 9606 9606 BIOGRID
RUVBL1 SMG9 Affinity Capture-Western 20371770 9606 9606 BIOGRID
RUVBL1 RUVBL2 Two-hybrid 25416956 9606 9606 BIOGRID
RUVBL1 DMAP1 Co-fractionation 26344197 9606 9606 BIOGRID
RUVBL1 RUVBL2 Co-fractionation 26344197 9606 9606 BIOGRID
RUVBL1 TRRAP Co-fractionation 26344197 9606 9606 BIOGRID
RUVBL1 TUBB4B Co-fractionation 26344197 9606 9606 BIOGRID
RUVBL1 RUVBL2 Reconstituted Complex 25636407 9606 9606 BIOGRID
RUVBL1 ECD Affinity Capture-Western 26711270 9606 9606 BIOGRID
RUVBL1 DPCD Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 RUVBL2 Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 INO80 Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 ACTR5 Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 ING3 Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 EPC1 Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 INO80B Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 INO80C Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 NFRKB Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 KAT5 Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 C12orf45 Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 SRCAP Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 C2orf44 Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 EPC2 Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 EP400 Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 JAZF1 Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 ZNHIT6 Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 VPS72 Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 SHQ1 Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 ZNHIT1 Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 ZNHIT3 Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 YY1 Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 DMAP1 Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 MBTD1 Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 TFPT Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 TRRAP Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 MCRS1 Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 BRD8 Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 YEATS4 Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 INO80E Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 ACTL6B Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 INO80D Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 ZNHIT2 Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 POLR3A Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 URI1 Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 PDRG1 Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 DKC1 Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 RPAP3 Affinity Capture-MS 28514442 9606 9606 BIOGRID
RUVBL1 AAR2 Affinity Capture-MS 28561026 9606 9606 BIOGRID
RUVBL1 ACTL6A Affinity Capture-MS 28561026 9606 9606 BIOGRID
RUVBL1 C12orf45 Affinity Capture-MS 28561026 9606 9606 BIOGRID
RUVBL1 C2orf44 Affinity Capture-MS 28561026 9606 9606 BIOGRID
RUVBL1 DKC1 Affinity Capture-MS 28561026 9606 9606 BIOGRID
RUVBL1 DPCD Affinity Capture-MS 28561026 9606 9606 BIOGRID
RUVBL1 EFTUD2 Affinity Capture-MS 28561026 9606 9606 BIOGRID
RUVBL1 EP400 Affinity Capture-MS 28561026 9606 9606 BIOGRID
RUVBL1 NOP58 Affinity Capture-MS 28561026 9606 9606 BIOGRID
RUVBL1 POLR2B Affinity Capture-MS 28561026 9606 9606 BIOGRID
RUVBL1 PRPF8 Affinity Capture-MS 28561026 9606 9606 BIOGRID
RUVBL1 RPAP3 Affinity Capture-MS 28561026 9606 9606 BIOGRID
RUVBL1 RUVBL1 Affinity Capture-MS 28561026 9606 9606 BIOGRID
RUVBL1 RUVBL2 Affinity Capture-MS 28561026 9606 9606 BIOGRID
RUVBL1 SHQ1 Affinity Capture-MS 28561026 9606 9606 BIOGRID
RUVBL1 SNRNP200 Affinity Capture-MS 28561026 9606 9606 BIOGRID
RUVBL1 SRCAP Affinity Capture-MS 28561026 9606 9606 BIOGRID
RUVBL1 TANGO6 Affinity Capture-MS 28561026 9606 9606 BIOGRID
RUVBL1 TTI1 Affinity Capture-MS 28561026 9606 9606 BIOGRID
RUVBL1 UPF1 Affinity Capture-MS 28561026 9606 9606 BIOGRID
RUVBL1 URI1 Affinity Capture-MS 28561026 9606 9606 BIOGRID
RUVBL1 ZNHIT2 Affinity Capture-MS 28561026 9606 9606 BIOGRID
RUVBL1 DMAP1 Affinity Capture-MS 28561026 9606 9606 BIOGRID
RUVBL1 RNU4-1 Affinity Capture-RNA 26275778 9606 9606 BIOGRID
RUVBL1 HIF1A Affinity Capture-Luminescence 27320910 9606 9606 BIOGRID
RUVBL1 SMARCD3 Negative Genetic 28481362 9606 9606 BIOGRID
RUVBL1 SETD1A Positive Genetic 28481362 9606 9606 BIOGRID
RUVBL1 ITFG1 Affinity Capture-Western 25437307 9606 9606 BIOGRID
RUVBL1 RUVBL2 Affinity Capture-Western 25437307 9606 9606 BIOGRID
RUVBL1 TUBA1A Affinity Capture-Western 25437307 9606 9606 BIOGRID
RUVBL1 RUVBL2 Two-hybrid 29892012 9606 9606 BIOGRID
RUVBL1 RUVBL2 Two-hybrid 32296183 9606 9606 BIOGRID
RUVBL1 NEIL3 Affinity Capture-Western 31980815 9606 9606 BIOGRID
RUVBL1 tubgcp3 Affinity Capture-Western 18463163 9606 8355 BIOGRID
 Annotation of RUVBL1
 TCGA cancer survival map of RUVBL1


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  RUVBL1