TcoF overview
TcoF: SAFB2
GeneID: 79685
Name: Scaffold attachment factor B2
Ensembl: ENSG00000130254
Species: Human
Class: NA
Family: Others
Disease: 0
Go term: 13
Pathway: --
Hallmark: --
Super Enhancer:

--
Enhancer:

chr19:5690610-5691330 chr19:5691460-5691540 chr19:5691680-5691840 chr19:5692220-5693300 chr19:5696770-5699030 chr19:5615660-5616140 chr19:5640700-5641600 chr19:5594190-5595370 chr19:5893300-5894680 chr19:5950670-5951400 chr19:5955900-5957920 chr19:5307920-5310380 chr19:5584520-5587000 chr19:5896590-5896910 chr19:5897010-5898020 chr19:5914320-5914390 chr19:5915160-5915230 chr19:5286760-5289190 chr19:5289380-5290310 chr19:5290490-5291040 chr19:5397510-5398850 chr19:5483920-5485520 chr19:5492350-5493560 chr19:5498850-5500090 chr19:6068520-6069170 chr19:5536000-5538500 chr19:5556030-5558170 chr19:5694910-5696060 chr19:5790350-5791060 chr19:5828340-5830640 chr19:5925750-5927970 chr19:5928100-5930220 chr19:5693470-5693560 chr19:5693780-5694390 chr19:6037880-6039990 chr19:5132020-5133890 chr19:5137690-5137970 chr19:5150460-5151340 chr19:5225860-5226450 chr19:5237030-5238920 chr19:5250080-5252300 chr19:5270710-5271570 chr19:5364300-5365140 chr19:5369160-5370520 chr19:5377460-5378040 chr19:5479870-5481000 chr19:5539040-5540110 chr19:5667460-5667830 chr19:5667900-5668170 chr19:5696180-5696250 chr19:6017590-6019840 chr19:6166030-6167050 chr19:5191910-5194300 chr19:5430220-5430740 chr19:5587990-5590280 chr19:5694560-5694770 chr19:5696380-5696680 chr19:5699220-5700790 chr19:5706000-5707070 chr19:5707160-5707700 chr19:5707840-5708350 chr19:5712010-5713140 chr19:5784060-5784380 chr19:5784450-5784540 chr19:5789780-5790050 chr19:5641960-5643720 chr19:5767380-5768170 chr19:5933690-5934330 chr19:5934600-5936680 chr19:5964920-5966940 chr19:6070230-6072470 chr19:6075100-6075920 chr19:6075950-6078210 chr19:5946170-5948320 chr19:5631170-5633600 chr19:6029580-6031020 chr19:5260470-5260810 chr19:5297600-5299500 chr19:5850460-5851400 chr19:5737940-5738980 chr19:5914500-5914570 chr19:6161310-6163540 chr19:6361780-6361870 chr19:6373040-6374210 chr19:5894870-5896460 chr19:6216520-6217960 chr19:5469870-5471070 chr19:5563500-5565250 chr19:5879480-5881670 chr19:5889020-5891280 chr19:5914750-5914950 chr19:5881690-5882820 chr19:5703140-5705030 chr19:5352050-5353000 chr19:5602430-5604590 chr19:5641670-5641750 chr19:5472130-5473000 chr19:5579350-5581220 chr19:5581900-5582550 chr19:5776920-5778380

Promoter:

chr19:5587010-5624057

 ChIP-seq based regulatory details of SAFB2
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
 Downstream target genes of SAFB2
 Protein-protein interaction of SAFB2
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
SAFB2 ESR1 Affinity Capture-Western 12660241 9606 9606 BIOGRID
SAFB2 SORBS3 Affinity Capture-Western 12660241 9606 9606 BIOGRID
SAFB2 CHGB Two-hybrid 16169070 9606 9606 BIOGRID
SAFB2 NCOR1 Affinity Capture-Western 16195251 9606 9606 BIOGRID
SAFB2 SRCAP Co-fractionation 22939629 9606 9606 BIOGRID
SAFB2 ZSCAN18 Two-hybrid 21988832 9606 9606 BIOGRID
SAFB2 TP53 Affinity Capture-Western 21130767 9606 9606 BIOGRID
SAFB2 HNRNPUL1 Co-fractionation 26344197 9606 9606 BIOGRID
SAFB2 SAFB Co-fractionation 26344197 9606 9606 BIOGRID
SAFB2 SSB Co-fractionation 26344197 9606 9606 BIOGRID
SAFB2 DHPS Affinity Capture-MS 28514442 9606 9606 BIOGRID
SAFB2 TRIP6 Affinity Capture-MS 28514442 9606 9606 BIOGRID
SAFB2 CIZ1 Affinity Capture-MS 28514442 9606 9606 BIOGRID
SAFB2 HIST1H2BH Proximity Label-MS 30021884 9606 9606 BIOGRID
 Annotation of SAFB2
 TCGA cancer survival map of SAFB2


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  SAFB2