TcoF overview
TcoF: SERTAD1
GeneID: 23408
Name: SERTA domain containing 1 variant
Ensembl: ENSG00000197019
Species: Human
Class: class 3
Family: Others
Disease: 3
Go term: 6
Pathway: --
Hallmark: --
Super Enhancer:

chr19:40946756-40952498 chr19:40947916-40952770 chr19:40948247-40953000 chr19:40949112-40952889 chr19:40949168-40952994 chr19:40926860-40939490 chr19:40926639-40940294 chr19:40925885-40932846 chr19:40925306-40933046 chr19:40924745-40932704 chr19:40923039-40940483 chr19:40926225-40940535 chr19:40926368-40940617 chr19:40926644-40940401 chr19:40926689-40939873 chr19:40927290-40939850 chr19:40926764-40939462 chr19:40926770-40940217 chr19:40926429-40940477 chr19:40926648-40939541 chr19:40926243-40940679 chr19:40926381-40940636 chr19:40927274-40939852 chr19:40925982-40940878 chr19:40926564-40939967 chr19:40926641-40939850 chr19:40928059-40939662 chr19:40926317-40932831 chr19:40926145-40933233 chr19:40927342-40950137 chr19:40926401-40951322 chr19:40923155-40951338 chr19:40909329-40951318 chr19:40915569-40951183 chr19:40926408-40952087 chr19:40926399-40951301 chr19:40926473-40951311 chr19:40926644-40951287 chr19:40909266-40952029 chr19:40909483-40951333 chr19:40926535-40950661 chr19:40926470-40951270 chr19:40909087-40951442 chr19:40909384-40951228 chr19:40923062-40951428 chr19:40926586-40951136 chr19:40909574-40951279 chr19:40909587-40950936 chr19:40909397-40951268 chr19:40909402-40952144 chr19:40909096-40952229 chr19:40909338-40951243 chr19:40909384-40951267 chr19:40909119-40951270 chr19:40922950-40951339 chr19:40909370-40952747 chr19:40909068-40952970 chr19:40926744-40952709 chr19:40926428-40953023 chr19:40926402-40952928 chr19:40925928-40951739 chr19:40926523-40952667 chr19:40922786-40953026 chr19:40913027-40952927 chr19:40909593-40951329 chr19:40926475-40952987 chr19:40909578-40952754 chr19:40926373-40951625 chr19:40926637-40951191 chr19:40923064-40951609 chr19:40926393-40951571 chr19:40909572-40952767 chr19:40926412-40952854 chr19:40926389-40952724 chr19:40909582-40952454 chr19:40923028-40952899 chr19:40926405-40952745 chr19:40926477-40951300 chr19:40926373-40952902 chr19:40917212-40952720 chr19:40923454-40952972 chr19:40926451-40951050 chr19:40926278-40953011 chr19:40926075-40951828 chr19:40926346-40951304 chr19:40926128-40951710 chr19:40926271-40951524 chr19:40909388-40951552 chr19:40926371-40952595 chr19:40909516-40952035 chr19:40926370-40953184 chr19:40926234-40952896 chr19:40926307-40951350 chr19:40926327-40952791 chr19:40926249-40951624 chr19:40926302-40952967 chr19:40926302-40952967 chr19:40926119-40951603 chr19:40926050-40951621 chr19:40926527-40952511 chr19:40916835-40940432 chr19:40926410-40952644 chr19:40926377-40951557 chr19:40926284-40951158 chr19:40926231-40953147 chr19:40926423-40951617 chr19:40926287-40952677 chr19:40922822-40952806 chr19:40926070-40951536 chr19:40925943-40951675 chr19:40922786-40952668 chr19:40926375-40951403 chr19:40926379-40951424 chr19:40926451-40951221 chr19:40926138-40951737 chr19:40926204-40951606 chr19:40925561-40951581 chr19:40922235-40951484 chr19:40926216-40951668 chr19:40926239-40951686 chr19:40926426-40951371 chr19:40923606-40950336 chr19:40922848-40952401 chr19:40922891-40951376 chr19:40926374-40951364 chr19:40924731-40952710 chr19:40915527-40940568 chr19:40925823-40951712 chr19:40926151-40952468 chr19:40926185-40951480 chr19:40926395-40951467 chr19:40926185-40951480 chr19:40926308-40951516 chr19:40926364-40952464 chr19:40926969-40952562 chr19:40926396-40951321 chr19:40925510-40952627 chr19:40926223-40951621 chr19:40926180-40952211 chr19:40926036-40951710 chr19:40926039-40952466 chr19:40926197-40951625 chr19:40916596-40951633 chr19:40925945-40951687 chr19:40926126-40951634 chr19:40926200-40951655

Enhancer:

chr19:40420480-40421090 chr19:40503060-40503760 chr19:40512090-40513180 chr19:40519210-40519570 chr19:40528810-40531060 chr19:40569460-40571800 chr19:40595320-40596070 chr19:40596140-40596700 chr19:40702370-40703210 chr19:40718880-40718980 chr19:40719100-40719420 chr19:40722180-40723090 chr19:40831210-40832240 chr19:40847800-40849330 chr19:40929450-40931770 chr19:40961810-40963990 chr19:40993760-40995980 chr19:41029550-41031400 chr19:41054680-41055090 chr19:41055320-41056140 chr19:41075630-41076340 chr19:41076640-41077760 chr19:41082890-41083130 chr19:41083540-41084050 chr19:41111130-41111310 chr19:41111560-41111630 chr19:41111740-41112130 chr19:41112210-41112300 chr19:41112430-41113270 chr19:41115780-41116430 chr19:41118100-41118970 chr19:41119100-41119300 chr19:41119440-41119820 chr19:41175930-41178300 chr19:41190460-41192810 chr19:41206360-41208500 chr19:41208600-41209270 chr19:41260830-41263230 chr19:41263410-41265330 chr19:41284300-41285920 chr19:41312580-41313040 chr19:41313460-41313710 chr19:41352000-41352770 chr19:41354280-41354510 chr19:40548840-40551100 chr19:40713080-40715000 chr19:41352960-41354120 chr19:41083190-41083300 chr19:41083340-41083460 chr19:41119940-41120220 chr19:41120350-41122790 chr19:41128930-41129500 chr19:41305540-41306240 chr19:40723280-40723860 chr19:40958980-40959620 chr19:41113440-41114120 chr19:41115570-41115650 chr19:41129990-41130390 chr19:41250590-41251030 chr19:40913940-40914060 chr19:40914160-40914240 chr19:40966310-40968130 chr19:41073350-41073560 chr19:41084450-41086220 chr19:41114510-41115430 chr19:41116560-41117050 chr19:41349880-41350530 chr19:41354670-41355720 chr19:41413570-41415670 chr19:41348840-41349440 chr19:41351390-41351860 chr19:40364770-40366020 chr19:40398510-40399180 chr19:40477150-40478050 chr19:40503820-40504150 chr19:41204220-41204780 chr19:41350680-41351190 chr19:41448960-41450040 chr19:40434210-40436250 chr19:40748600-40749060 chr19:40753150-40754430 chr19:40755150-40756170 chr19:40771360-40772690 chr19:40761180-40762830 chr19:40762960-40764660 chr19:40893040-40893400 chr19:40730260-40730390 chr19:40836620-40837790 chr19:40828280-40829910 chr19:40747980-40748440 chr19:40746610-40747840 chr19:40947990-40948230 chr19:40907760-40909610 chr19:41125400-41126390 chr19:40904720-40906440 chr19:40779330-40781610 chr19:40909770-40911650 chr19:40744000-40744810 chr19:40744880-40745950 chr19:40982270-40983680 chr19:41018100-41018510 chr19:41084120-41084360 chr19:41126760-41128300 chr19:41129640-41129840 chr19:41186960-41187450 chr19:41313180-41313380 chr19:41188870-41190320 chr19:40980400-40981340 chr19:41065020-41065800 chr19:40730720-40732280 chr19:40741260-40741790 chr19:40832390-40834310 chr19:40894200-40894860 chr19:40559800-40562090 chr19:41150950-41153250 chr19:41251100-41251760 chr19:41155830-41158070 chr19:40749120-40749510 chr19:40787340-40787920 chr19:40788070-40788440 chr19:40504320-40505200 chr19:40652730-40654780 chr19:40805840-40807850 chr19:40807860-40809030 chr19:40847000-40847690 chr19:41117890-41117970 chr19:41227790-41228860 chr19:40590840-40591280 chr19:40721570-40721960 chr19:40868710-40869800 chr19:41240330-41242710 chr19:41314350-41314980 chr19:41318610-41319420 chr19:41370680-41371350 chr19:41410260-41411640 chr19:41430350-41430920 chr19:41480350-41482800 chr19:41485140-41487600 chr19:41505620-41507830 chr19:41508780-41509900 chr19:41528700-41529630 chr19:41551010-41553320 chr19:41645650-41646380 chr19:41665650-41666390 chr19:41677430-41679460 chr19:41679470-41680530 chr19:41699350-41700440 chr19:41700620-41700790 chr19:41725380-41726540 chr19:41726760-41727050 chr19:41732820-41735150 chr19:41735230-41736870 chr19:41755600-41756410 chr19:41816260-41818570 chr19:41847940-41848070 chr19:41883230-41884180 chr19:41914110-41916540 chr19:41916920-41918360 chr19:41664500-41665620 chr19:40421700-40423760 chr19:40720130-40720870 chr19:41373760-41375400 chr19:40676400-40677540 chr19:40876490-40877570 chr19:40996160-40997110 chr19:41014580-41015110 chr19:41131290-41131760 chr19:41307320-41307540 chr19:41114280-41114380 chr19:41117300-41117760 chr19:41229780-41230490 chr19:41230900-41231240 chr19:41090820-41092340 chr19:40698620-40699840 chr19:41179930-41180700 chr19:41036500-41037700 chr19:40884440-40884940

Promoter:

chr19:40927496-40931899

 ChIP-seq based regulatory details of SERTAD1
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
 Downstream target genes of SERTAD1
 Protein-protein interaction of SERTAD1
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
SERTAD1 KLHL42 Two-hybrid 16189514 9606 9606 BIOGRID
SERTAD1 CDK4 Reconstituted Complex 15065884 9606 9606 BIOGRID
SERTAD1 CCND2 Reconstituted Complex 15065884 9606 9606 BIOGRID
SERTAD1 CDKN2A Reconstituted Complex 15065884 9606 9606 BIOGRID
SERTAD1 CDK4 Reconstituted Complex 10580009 9606 9606 BIOGRID
SERTAD1 SUPT7L Reconstituted Complex 17141982 9606 9606 BIOGRID
SERTAD1 KAT2B Reconstituted Complex 17141982 9606 9606 BIOGRID
SERTAD1 TRIM28 Affinity Capture-Western 17141982 9606 9606 BIOGRID
SERTAD1 CHURC1 Two-hybrid 20211142 9606 9606 BIOGRID
SERTAD1 SETD7 Affinity Capture-Western 21988832 9606 9606 BIOGRID
SERTAD1 TGM2 Two-hybrid 21988832 9606 9606 BIOGRID
SERTAD1 SPEN Two-hybrid 21988832 9606 9606 BIOGRID
SERTAD1 SMAD3 Two-hybrid 21988832 9606 9606 BIOGRID
SERTAD1 STAT5B Two-hybrid 21988832 9606 9606 BIOGRID
SERTAD1 TLR4 Two-hybrid 21988832 9606 9606 BIOGRID
SERTAD1 SETD7 Two-hybrid 21988832 9606 9606 BIOGRID
SERTAD1 ROPN1 Two-hybrid 25416956 9606 9606 BIOGRID
SERTAD1 ZNF410 Two-hybrid 25416956 9606 9606 BIOGRID
SERTAD1 EGLN3 Two-hybrid 25416956 9606 9606 BIOGRID
SERTAD1 CIB3 Two-hybrid 25416956 9606 9606 BIOGRID
SERTAD1 PATE1 Two-hybrid 25416956 9606 9606 BIOGRID
SERTAD1 P4HA3 Two-hybrid 25416956 9606 9606 BIOGRID
SERTAD1 ADCY1 Reconstituted Complex 28656888 9606 9606 BIOGRID
SERTAD1 XIAP Reconstituted Complex 28656888 9606 9606 BIOGRID
SERTAD1 ADCY1 Biochemical Activity 28656888 9606 9606 BIOGRID
SERTAD1 NEDD4 Reconstituted Complex 28666866 9606 9606 BIOGRID
SERTAD1 PSORS1C2 Two-hybrid 32296183 9606 9606 BIOGRID
 Annotation of SERTAD1
 TCGA cancer survival map of SERTAD1


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  SERTAD1