TcoF overview
TcoF: SMARCD3
GeneID: 23013
Name: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3
Ensembl: ENSG00000082014
Species: Human
Class: NA
Family: SWI/SNF
Disease: 1
Go term: 28
Pathway: 13
Hallmark: --
Super Enhancer:

chr7:150943123-150950641 chr7:150943243-150950580 chr7:150942951-150950803 chr7:150941586-150950936 chr7:150940802-150952056 chr7:150942065-150950941 chr7:150944585-150950679 chr7:150939698-150951903 chr7:150941686-150950922 chr7:150941530-150950985 chr7:150940783-150950841 chr7:150940661-150950788 chr7:150939746-150950590 chr7:150942640-150950896 chr7:150942684-150952054 chr7:150942685-150950709 chr7:150941779-150950643 chr7:150940661-150950788 chr7:150942683-150950985 chr7:150942415-150949922 chr7:150928754-150970000

--
Enhancer:

chr7:150773920-150773990 chr7:150711010-150711090 chr7:150923590-150924250 chr7:150940780-150942540 chr7:151064210-151064940 chr7:151065060-151065820 chr7:150775180-150775640 chr7:150691050-150692290 chr7:150693640-150693850 chr7:150694010-150695440 chr7:150707380-150707680 chr7:150707900-150707980 chr7:150708080-150709290 chr7:150715540-150715700 chr7:150737380-150737580 chr7:150749840-150750290 chr7:150777010-150777770 chr7:150922080-150923390 chr7:150939930-150940740 chr7:150972340-150973790 chr7:151046330-151048500 chr7:151078830-151078960 chr7:151048570-151049890 chr7:150716460-150718270 chr7:150937610-150938570 chr7:150939690-150939800 chr7:151049970-151051540 chr7:151168520-151168620 chr7:151174500-151175330 chr7:150556140-150557130 chr7:151038930-151041330 chr7:151082370-151084860 chr7:151085200-151086760 chr7:151165220-151166100 chr7:151166160-151167650 chr7:150714360-150714950 chr7:151362020-151362910 chr7:150748410-150748890 chr7:150833480-150835220 chr7:150704360-150706010 chr7:150642600-150643960 chr7:150760280-150761280 chr7:151135730-151136980 chr7:150810050-150812110 chr7:150812130-150813870 chr7:150765140-150767030 chr7:150814860-150815290 chr7:150771930-150772340 chr7:150772600-150772690 chr7:150772860-150773090 chr7:150773270-150773370 chr7:150773620-150773700 chr7:150774120-150774180 chr7:150774320-150774390 chr7:150774490-150774700 chr7:150774870-150774960 chr7:150775790-150775920 chr7:150776110-150776580 chr7:150820730-150820880 chr7:150835400-150837060 chr7:150701020-150703510 chr7:150706360-150706480 chr7:150706670-150707200 chr7:151061890-151064020 chr7:151121950-151122370 chr7:151181890-151183980 chr7:151188100-151189930 chr7:151294820-151295860 chr7:151376880-151378820 chr7:151289170-151291420 chr7:150785620-150787850 chr7:150788030-150789570 chr7:151200050-151202000 chr7:151208460-151210910 chr7:151263310-151264830 chr7:150895760-150897960 chr7:151042550-151044970 chr7:150634620-150636720 chr7:150710500-150710810 chr7:150748040-150748120 chr7:150748180-150748250 chr7:150813940-150814180 chr7:150814270-150814450 chr7:150863640-150864090 chr7:151067340-151068930 chr7:150527570-150528550 chr7:150549650-150550400 chr7:150605940-150607960 chr7:150638440-150640600 chr7:150665240-150666590 chr7:150706150-150706270 chr7:150712210-150712440 chr7:150907320-150908120 chr7:150938740-150938960 chr7:151090450-151091880 chr7:151091900-151092860 chr7:151093280-151095560 chr7:151095640-151096720 chr7:151099210-151101250 chr7:151167740-151168470 chr7:151168690-151171120 chr7:151179900-151180520 chr7:151181560-151181800 chr7:151184020-151184630 chr7:151185000-151185220 chr7:151190140-151190460 chr7:151192900-151193080 chr7:151193180-151193390 chr7:151194160-151196600 chr7:151234730-151236950 chr7:151303290-151304220 chr7:151304300-151306150 chr7:151392970-151395060 chr7:151412340-151414130 chr7:151422820-151423480 chr7:151423520-151425700 chr7:151493140-151495620 chr7:151504890-151507050 chr7:151637140-151638370 chr7:151691120-151692060 chr7:150650310-150652480 chr7:151191290-151191590 chr7:150715140-150715380 chr7:150646140-150646510 chr7:150869640-150871340 chr7:150641180-150642040 chr7:151214120-151216540 chr7:150939060-150939220 chr7:151320560-151322000 chr7:151366030-151367840 chr7:151368040-151369040 chr7:151540640-151542550 chr7:150600410-150602350 chr7:150713910-150714120 chr7:150737720-150737910 chr7:150738320-150739040 chr7:150796490-150796860 chr7:150796950-150797620 chr7:151287010-151288820 chr7:151395710-151397850 chr7:151585390-151587700 chr7:151587730-151589300 chr7:150956890-150957470 chr7:150921200-150921860 chr7:151097330-151098960 chr7:150597880-150600240 chr7:150954360-150956640 chr7:150484290-150486530 chr7:150628110-150629220 chr7:150957950-150959780 chr7:150871600-150872780 chr7:150878550-150879520 chr7:150695540-150695620 chr7:150697690-150698310 chr7:150703580-150703970

--
Promoter:

chr7:150935850-150974982

False
 ChIP-seq based regulatory details of SMARCD3
select * from encode where Experiment_target='SMARCD3'
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
 Downstream target genes of SMARCD3
 Protein-protein interaction of SMARCD3
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
SMARCD3 RARA Reconstituted Complex 17363140 9606 9606 BIOGRID
SMARCD3 MYOD1 Affinity Capture-Western 22068056 9606 9606 BIOGRID
SMARCD3 SMARCA4 Affinity Capture-Western 22068056 9606 9606 BIOGRID
SMARCD3 MYOD1 Co-localization 22068056 9606 9606 BIOGRID
SMARCD3 SMARCA4 Co-localization 22068056 9606 9606 BIOGRID
SMARCD3 SMARCB1 Co-fractionation 22939629 9606 9606 BIOGRID
SMARCD3 PPARG Reconstituted Complex 14701856 9606 9606 BIOGRID
SMARCD3 SMARCA4 Affinity Capture-Western 14701856 9606 9606 BIOGRID
SMARCD3 ESRRA Reconstituted Complex 14701856 9606 9606 BIOGRID
SMARCD3 NR1H4 Reconstituted Complex 14701856 9606 9606 BIOGRID
SMARCD3 RORA Reconstituted Complex 14701856 9606 9606 BIOGRID
SMARCD3 SREBF1 Reconstituted Complex 14701856 9606 9606 BIOGRID
SMARCD3 JUN Reconstituted Complex 14701856 9606 9606 BIOGRID
SMARCD3 PBX1 Reconstituted Complex 14701856 9606 9606 BIOGRID
SMARCD3 ACTL6A Co-fractionation 26344197 9606 9606 BIOGRID
SMARCD3 ARID1A Co-fractionation 26344197 9606 9606 BIOGRID
SMARCD3 ARID1B Co-fractionation 26344197 9606 9606 BIOGRID
SMARCD3 BCL7A Co-fractionation 26344197 9606 9606 BIOGRID
SMARCD3 BCL7B Co-fractionation 26344197 9606 9606 BIOGRID
SMARCD3 BCL7C Co-fractionation 26344197 9606 9606 BIOGRID
SMARCD3 DPF2 Co-fractionation 26344197 9606 9606 BIOGRID
SMARCD3 HMGB1 Co-fractionation 26344197 9606 9606 BIOGRID
SMARCD3 POLR2D Co-fractionation 26344197 9606 9606 BIOGRID
SMARCD3 SMARCA4 Co-fractionation 26344197 9606 9606 BIOGRID
SMARCD3 TBL1X Co-fractionation 26344197 9606 9606 BIOGRID
SMARCD3 TBL1XR1 Co-fractionation 26344197 9606 9606 BIOGRID
SMARCD3 UPF2 Co-fractionation 26344197 9606 9606 BIOGRID
SMARCD3 ESR1 Reconstituted Complex 17363140 9606 9606 BIOGRID
SMARCD3 RARG Reconstituted Complex 17363140 9606 9606 BIOGRID
SMARCD3 RARB Reconstituted Complex 17363140 9606 9606 BIOGRID
SMARCD3 RXRA Reconstituted Complex 17363140 9606 9606 BIOGRID
SMARCD3 TRRAP Negative Genetic 28481362 9606 9606 BIOGRID
SMARCD3 BCL7A Affinity Capture-MS 24981860 9606 9606 BIOGRID
SMARCD3 SS18L1 Affinity Capture-MS 24981860 9606 9606 BIOGRID
SMARCD3 BRD7 Affinity Capture-MS 24981860 9606 9606 BIOGRID
SMARCD3 PBRM1 Affinity Capture-MS 24981860 9606 9606 BIOGRID
 Annotation of SMARCD3
 TCGA cancer survival map of SMARCD3


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  SMARCD3