TcoF overview
TcoF: SMYD2
GeneID: 79723
Name: N-lysine methyltransferase SMYD2
Ensembl: ENSG00000143499
Species: Human
Class: class 1
Family: SMYD
Disease: 2
Go term: 19
Pathway: 3
Hallmark: --
Super Enhancer:

chr1:214449632-214471212 chr1:214444755-214477248 chr1:214453600-214471406 chr1:214434665-214513157 chr1:214434380-214471126 chr1:214572303-214580692 chr1:214573648-214579888 chr1:214534683-214630829 chr1:214559524-214579670 chr1:214576934-214594485 chr1:214576604-214593686 chr1:214559718-214604439 chr1:214485144-214536630 chr1:214489457-214529461 chr1:214316064-214332115 chr1:214504490-214629480 chr1:214296507-214340675 chr1:214279086-214340439 chr1:214275139-214342880 chr1:214278913-214341512 chr1:214385733-214394694 chr1:214506242-214560725

--
Enhancer:

chr1:214454770-214457240 chr1:214611500-214611870 chr1:214611910-214612360 chr1:214614540-214615200 chr1:214722230-214724520 chr1:214612540-214614500 chr1:214505540-214507540 chr1:214549780-214551300 chr1:214565050-214567030 chr1:214501070-214503510 chr1:214504410-214505360 chr1:214558130-214560180 chr1:214567120-214568240 chr1:214575120-214576220 chr1:214811340-214813260 chr1:214107260-214108350 chr1:214402000-214402720 chr1:214162060-214164240 chr1:214776660-214779150 chr1:214503620-214504290 chr1:214469160-214469330 chr1:214469880-214471220 chr1:214648800-214651250 chr1:214664880-214665150 chr1:214665650-214667150 chr1:214667280-214668930 chr1:214669120-214670160 chr1:214491480-214492200 chr1:214499400-214500960 chr1:214576300-214576460 chr1:214577550-214578800 chr1:214588070-214590550 chr1:214594620-214597110 chr1:214625320-214627500 chr1:214627690-214629490 chr1:214687400-214688410 chr1:214689060-214691160 chr1:214691380-214692280 chr1:214739220-214741280 chr1:214742470-214744690 chr1:214880660-214881840 chr1:215003630-215006020 chr1:215011510-215012060 chr1:215034440-215036850 chr1:215037960-215039230 chr1:215074510-215076930 chr1:215130020-215132460 chr1:215140620-215141950 chr1:215156350-215157270 chr1:215162390-215164580 chr1:215166520-215167530 chr1:215195090-215196570 chr1:215196580-215197750 chr1:215256780-215258890 chr1:215287030-215288740 chr1:215446630-215448300 chr1:215450570-215451570 chr1:215006220-215007380 chr1:214581290-214582860 chr1:214864670-214865920 chr1:214842890-214844170 chr1:214639530-214641750 chr1:214745570-214748000 chr1:214120280-214121200 chr1:214677440-214679000 chr1:214679900-214681540 chr1:214720260-214720940 chr1:214851360-214852130 chr1:214585100-214585450 chr1:214714530-214716770 chr1:214756960-214758880 chr1:214560270-214560870 chr1:214510480-214512010 chr1:214513100-214514500 chr1:214514560-214514990 chr1:215306640-215307400 chr1:214462810-214464840 chr1:214484450-214484900 chr1:214489670-214491310 chr1:214837920-214840390 chr1:214534680-214536680 chr1:214787260-214788170 chr1:214175100-214177400 chr1:214195060-214196480

--
Promoter:

chr1:214454445-214510474

False
 ChIP-seq based regulatory details of SMYD2
select * from encode where Experiment_target='SMYD2'
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
 Downstream target genes of SMYD2
 Protein-protein interaction of SMYD2
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
SMYD2 GSK3B Affinity Capture-MS 17353931 9606 9606 BIOGRID
SMYD2 EPB41L3 Affinity Capture-MS 17353931 9606 9606 BIOGRID
SMYD2 CLASP2 Affinity Capture-MS 17353931 9606 9606 BIOGRID
SMYD2 AKAP11 Affinity Capture-MS 17353931 9606 9606 BIOGRID
SMYD2 CDC37 Affinity Capture-MS 17353931 9606 9606 BIOGRID
SMYD2 IGF2BP1 Affinity Capture-MS 17353931 9606 9606 BIOGRID
SMYD2 AXIN1 Affinity Capture-MS 17353931 9606 9606 BIOGRID
SMYD2 TP53 Biochemical Activity 17108971 9606 9606 BIOGRID
SMYD2 TP53 Affinity Capture-Western 18065756 9606 9606 BIOGRID
SMYD2 EPB41L3 Affinity Capture-Western 18065756 9606 9606 BIOGRID
SMYD2 HSP90AA1 Affinity Capture-Western 18065756 9606 9606 BIOGRID
SMYD2 RB1 Biochemical Activity 20870719 9606 9606 BIOGRID
SMYD2 RB1 Reconstituted Complex 20870719 9606 9606 BIOGRID
SMYD2 HSP90AA1 Biochemical Activity 22028380 9606 9606 BIOGRID
SMYD2 HIST2H3C Biochemical Activity 21678921 9606 9606 BIOGRID
SMYD2 ESR1 Biochemical Activity 24101509 9606 9606 BIOGRID
SMYD2 BTF3 Two-hybrid 32296183 9606 9606 BIOGRID
SMYD2 RPP30 Affinity Capture-MS 24981860 9606 9606 BIOGRID
SMYD2 BTF3 Affinity Capture-MS 24981860 9606 9606 BIOGRID
SMYD2 MORC4 Affinity Capture-MS 24981860 9606 9606 BIOGRID
SMYD2 NUBP2 Affinity Capture-MS 24981860 9606 9606 BIOGRID
SMYD2 ZXDC Affinity Capture-MS 24981860 9606 9606 BIOGRID
SMYD2 TRMT2A Affinity Capture-MS 24981860 9606 9606 BIOGRID
SMYD2 RPS29 Affinity Capture-MS 24981860 9606 9606 BIOGRID
SMYD2 GFPT1 Affinity Capture-MS 24981860 9606 9606 BIOGRID
SMYD2 ARL1 Affinity Capture-MS 24981860 9606 9606 BIOGRID
SMYD2 PSMD4 Affinity Capture-MS 24981860 9606 9606 BIOGRID
 Annotation of SMYD2
 TCGA cancer survival map of SMYD2


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  SMYD2