TcoF overview
| TcoF: | SMYD3 | |
| GeneID: | 153443 | |
| Name: | Histone-lysine N-methyltransferase SMYD3 | |
| Ensembl: | ENSG00000185420 | |
| Species: | Human | |
| Class: | class 3 | |
| Family: | SMYD | |
| Disease: | 3 | |
| Go term: | 16 | |
| Pathway: | 1 | |
| Hallmark: | -- | |
| Super Enhancer: |
chr1:246589156-246609712 chr1:246019161-246045293 chr1:246303369-246357366 chr1:246019111-246045592 chr1:246106312-246169625 chr1:246018925-246045662 chr1:246019001-246045931 chr1:246022411-246040682 chr1:246019303-246045614 chr1:246109784-246169549 chr1:245950297-245965298 chr1:245928784-245936866 chr1:246114832-246169462 chr1:246019408-246045837 chr1:245950375-245966178 chr1:245928783-245937005 chr1:246022292-246044464 chr1:246131748-246151038 chr1:246019255-246045469 chr1:246148674-246169460 chr1:245950544-245965443 chr1:246115820-246169429 chr1:246019254-246045616 chr1:245950398-245964591 chr1:245928711-245936730 chr1:246226236-246250247 chr1:246228288-246281142 chr1:246372569-246384743 chr1:246302029-246324862 chr1:246022642-246044268 chr1:246022714-246045370 chr1:246018992-246060750 chr1:245911117-245971991 chr1:246115804-246169665 chr1:246227102-246281269 chr1:246019202-246045898 chr1:246463543-246481098 chr1:245934531-245979384 chr1:245936591-245978828 chr1:246258007-246278355 chr1:246229539-246311271 chr1:245950028-245978061 chr1:246115967-246169587 chr1:246000453-246053155 chr1:245937876-245978412 chr1:246147517-246170328 chr1:246018802-246053212 chr1:245950117-245977604 chr1:245904244-245968676 chr1:246146647-246165633 chr1:246566392-246615079 chr1:245897934-245979502 chr1:245933024-245960563 chr1:246577198-246614857 chr1:245905150-245972195 chr1:245933154-245978118 chr1:246221446-246281563 chr1:246220855-246295045 chr1:246312879-246390453 chr1:246221570-246283217 chr1:246147980-246474515 chr1:246220902-246284756 chr1:246313511-246352731 chr1:246230185-246272317 chr1:246230257-246280604 chr1:245933063-245998572 chr1:246019177-246045919 chr1:245933430-245999660 chr1:246300396-246321129 |
|
| Enhancer: |
chr1:246305460-246307410 chr1:246362520-246362930 chr1:246667990-246670350 chr1:246745300-246747750 chr1:246655490-246656820 chr1:246887920-246890190 chr1:246450660-246451180 chr1:246492460-246493780 chr1:246784940-246786070 chr1:246815450-246816880 chr1:246820590-246822130 chr1:246907140-246907370 chr1:246907420-246907940 chr1:246931440-246933380 chr1:247007230-247008610 chr1:246709130-246710570 chr1:247103090-247105430 chr1:246845200-246846040 chr1:246234620-246236280 chr1:246447350-246447700 chr1:246646090-246646420 chr1:246660040-246661510 chr1:246435440-246436140 chr1:246646900-246647860 chr1:246916670-246918220 chr1:246319160-246321660 chr1:246324620-246325040 chr1:246590750-246593160 chr1:246755240-246756550 chr1:246794330-246795190 chr1:246795220-246797220 chr1:246810150-246810440 chr1:246842370-246843210 chr1:246843450-246845100 chr1:246866890-246869380 chr1:246957240-246959160 chr1:247092150-247094600 chr1:247110440-247112790 chr1:247169810-247171200 chr1:247239990-247241890 chr1:247265420-247267240 chr1:246742040-246744160 chr1:246791720-246793640 chr1:247037460-247039330 chr1:246893080-246895150 chr1:247125070-247126130 chr1:247289080-247290600 chr1:246890310-246892620 chr1:246384620-246385880 chr1:246666160-246667980 chr1:246631850-246634270 chr1:246680130-246681000 chr1:246681080-246682770 chr1:246317560-246318290 chr1:246505940-246508240 chr1:246621980-246622840 chr1:246964130-246965100 chr1:247000740-247001700 chr1:246382660-246383600 chr1:246487610-246488540 chr1:246870240-246871470 chr1:246911990-246912910 chr1:246276440-246278690 chr1:246739940-246741310 chr1:246377510-246379630 chr1:246975630-246976980 chr1:246626120-246626780 chr1:246483040-246484690 chr1:246734570-246736700 chr1:246996850-246997490 chr1:246781140-246782060 chr1:246801410-246803660 chr1:246314580-246316720 |
|
| Promoter: |
chr1:245912644-246670614 |
ChIP-seq based regulatory details of SMYD3
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|
Downstream target genes of SMYD3
Upstream regulatory details of SMYD3
Protein-protein interaction of SMYD3
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| SMYD3 | MEST | Affinity Capture-MS | 17353931 | 9606 | 9606 | BIOGRID |
| SMYD3 | HELZ | Affinity Capture-Western | 15235609 | 9606 | 9606 | BIOGRID |
| SMYD3 | HELZ | Two-hybrid | 15235609 | 9606 | 9606 | BIOGRID |
| SMYD3 | POLR2A | Affinity Capture-Western | 15235609 | 9606 | 9606 | BIOGRID |
| SMYD3 | HSP90AA1 | Affinity Capture-Western | 15235609 | 9606 | 9606 | BIOGRID |
| SMYD3 | HIST3H3 | Biochemical Activity | 15235609 | 9606 | 9606 | BIOGRID |
| SMYD3 | ESR1 | Affinity Capture-Western | 19509295 | 9606 | 9606 | BIOGRID |
| SMYD3 | EZH2 | Protein-RNA | 22659877 | 9606 | 9606 | BIOGRID |
| SMYD3 | APP | Reconstituted Complex | 21832049 | 9606 | 9606 | BIOGRID |
| SMYD3 | VANGL1 | Two-hybrid | 21988832 | 9606 | 9606 | BIOGRID |
| SMYD3 | HSP90AA1 | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| SMYD3 | HSP90AB1 | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| SMYD3 | HSP90AB4P | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| SMYD3 | HSP90AB3P | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| SMYD3 | HSP90AA5P | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| SMYD3 | MAGED4B | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| SMYD3 | KDM3B | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| SMYD3 | HSP90AB3P | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| SMYD3 | HSP90AB4P | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| SMYD3 | HSP90AA5P | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| SMYD3 | HSP90AA1 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| SMYD3 | HSP90AB1 | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| SMYD3 | KDM3B | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| SMYD3 | TP53 | Affinity Capture-Western | 31002112 | 9606 | 9606 | BIOGRID |
| SMYD3 | TP53 | Reconstituted Complex | 31002112 | 9606 | 9606 | BIOGRID |
| SMYD3 | TP53 | Co-localization | 31002112 | 9606 | 9606 | BIOGRID |
| SMYD3 | UBE2R2 | Affinity Capture-Western | 31002112 | 9606 | 9606 | BIOGRID |
| SMYD3 | TMA7 | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
| SMYD3 | MRPL24 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SMYD3 | AMY1A | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SMYD3 | MRPL41 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SMYD3 | MRPL28 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SMYD3 | ALDH3A2 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SMYD3 | MRPL23 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SMYD3 | RPL27 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SMYD3 | SMYD1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SMYD3 | NME1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SMYD3 | RPL7A | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
Annotation of SMYD3
TCGA cancer survival map of SMYD3
Expression of SMYD3
Disease information of SMYD3