TcoF overview
TcoF: SPEN
GeneID: 51188
Name: Msx2-interacting protein
Ensembl: ENSG00000065526
Species: Human
Class: NA
Family: Others
Disease: 6
Go term: 12
Pathway: 3
Hallmark: --
Super Enhancer:

chr1:16209148-16252614 chr1:16193154-16252147 chr1:16159931-16178308 chr1:16156307-16177033 chr1:16155509-16177159 chr1:16159260-16178216 chr1:16159170-16177545 chr1:16159269-16177103 chr1:16160057-16178252 chr1:16156574-16177176 chr1:16160200-16177032 chr1:16151754-16177319 chr1:16160509-16177096 chr1:16160068-16177168 chr1:16159844-16178347 chr1:16159428-16177425 chr1:16154630-16176928 chr1:16160386-16177418 chr1:16160576-16177075 chr1:16159703-16178096 chr1:16159616-16177467 chr1:16159442-16176941 chr1:16160817-16163031 chr1:16158904-16177303 chr1:16158895-16178748 chr1:16160003-16176945 chr1:16160727-16176902 chr1:16159528-16177057 chr1:16159884-16177745 chr1:16159945-16178556 chr1:16152012-16177380 chr1:16151667-16177028 chr1:16160211-16177096 chr1:16159534-16176898 chr1:16159284-16177585 chr1:16159223-16176835 chr1:16159915-16177385 chr1:16160281-16177783 chr1:16160115-16177756 chr1:16154514-16177991 chr1:16156091-16177661 chr1:16159982-16178475 chr1:16159914-16178455 chr1:16151816-16177245 chr1:16156466-16176912 chr1:16160733-16176958 chr1:16159841-16177221 chr1:16159043-16177676 chr1:16159210-16177324 chr1:16159720-16179237 chr1:16158052-16177228 chr1:16157863-16183788 chr1:16156778-16177954 chr1:16156787-16177624 chr1:16156138-16177907 chr1:16159945-16177798 chr1:16159350-16179553 chr1:16160066-16178570 chr1:16151620-16177095 chr1:16159829-16177541 chr1:16157055-16176903 chr1:16159957-16179152 chr1:16159357-16177835 chr1:16160166-16177335 chr1:16151421-16177190 chr1:16156378-16177079 chr1:16160237-16177791 chr1:16156855-16178858 chr1:16159169-16179711 chr1:16158029-16177629 chr1:16159312-16178919 chr1:16157005-16178971 chr1:16159269-16177226 chr1:16156625-16178370 chr1:16159217-16179216 chr1:16155560-16178758 chr1:16159140-16179367 chr1:16155514-16178866 chr1:16155786-16178080 chr1:16159274-16178106 chr1:16151853-16179053 chr1:16156840-16178774 chr1:16155835-16178694 chr1:16156733-16177834 chr1:16156948-16177206 chr1:16160612-16177196 chr1:16160443-16177125 chr1:16159764-16176975 chr1:16160659-16176982 chr1:16159942-16177626 chr1:16154607-16177030 chr1:16155845-16177575 chr1:16159753-16176791 chr1:16160250-16176667 chr1:16156414-16178683 chr1:16154638-16176753 chr1:16159263-16177462 chr1:16159641-16177265 chr1:16159596-16179881 chr1:16159442-16176862 chr1:16159458-16176855 chr1:16159441-16177112 chr1:16160065-16177475 chr1:16160074-16178247 chr1:16160045-16178035 chr1:16159355-16177149 chr1:16160626-16177052 chr1:16160782-16176918 chr1:16160767-16177278 chr1:16160690-16177294 chr1:16160249-16177271 chr1:16160043-16177621 chr1:16156463-16178128 chr1:16159317-16177336 chr1:16141939-16179924 chr1:16159786-16178998 chr1:16159344-16179846 chr1:16159709-16178441 chr1:16159054-16179323 chr1:16159660-16176884 chr1:16158572-16176904 chr1:16159787-16176939 chr1:16160359-16176916 chr1:16160163-16177152 chr1:16159302-16177503 chr1:16151459-16178707 chr1:16160410-16163350 chr1:16158078-16177446 chr1:16151751-16177436 chr1:16151436-16178105 chr1:16151281-16178365 chr1:16152182-16176860 chr1:16142649-16177687 chr1:16158461-16178078 chr1:16159988-16176871 chr1:16159660-16177608 chr1:16159699-16176847 chr1:16155442-16178375 chr1:16159389-16178541 chr1:16159316-16176879 chr1:16159030-16178860 chr1:16158993-16177408 chr1:16160110-16177361 chr1:16159957-16177558 chr1:16158866-16177713 chr1:16159322-16164195 chr1:16158908-16176791 chr1:16157950-16177449 chr1:16156328-16177225 chr1:16156328-16177225 chr1:16158889-16185804 chr1:16160376-16176851 chr1:16156260-16178904 chr1:16146879-16177745 chr1:16158597-16177991 chr1:16159479-16177353 chr1:16158687-16177608 chr1:16159678-16177939 chr1:16159659-16177069 chr1:16157983-16177362 chr1:16160108-16177109 chr1:16156032-16179783 chr1:16159242-16177942 chr1:16159282-16178217 chr1:16156801-16185479 chr1:16155842-16177334 chr1:16155855-16177416 chr1:16159447-16176915 chr1:16155730-16177796 chr1:16159310-16177459 chr1:16158513-16177040 chr1:16158990-16177793 chr1:16159644-16178127 chr1:16154544-16176997 chr1:16157234-16177240 chr1:16156841-16178878 chr1:16158772-16177088 chr1:16160170-16177183 chr1:16159514-16178309 chr1:16159630-16177661 chr1:16159349-16177655 chr1:16158807-16177656 chr1:16158063-16177421 chr1:16154691-16177519 chr1:16156198-16178959 chr1:16159569-16177147 chr1:16159242-16178227 chr1:16158763-16178857 chr1:16159186-16179288 chr1:16159757-16178254 chr1:16158889-16179041 chr1:16159485-16177547 chr1:16159373-16179131 chr1:16159575-16178961 chr1:16160044-16177366 chr1:16158890-16177937 chr1:16157641-16178120 chr1:16157956-16178219 chr1:16157924-16178165 chr1:16159456-16177477 chr1:16160327-16164347 chr1:16160192-16177605 chr1:16156524-16178960 chr1:16156197-16179127 chr1:16156460-16178885 chr1:16158443-16179672 chr1:16159196-16177240 chr1:16159395-16178246 chr1:16155866-16177388 chr1:16155921-16177516 chr1:16160898-16180604 chr1:16159593-16178530 chr1:16155656-16176866 chr1:16155898-16176876 chr1:16159092-16177038 chr1:16159318-16177064 chr1:16160780-16176826 chr1:16158860-16177454 chr1:16159165-16177527 chr1:16154725-16177497 chr1:16159326-16176966 chr1:16157907-16177206 chr1:16156129-16178984 chr1:16156430-16177228 chr1:16158485-16177255 chr1:16151851-16179799 chr1:16151669-16184550 chr1:16160692-16177092 chr1:16158735-16177110 chr1:16158723-16177051 chr1:16158739-16177162 chr1:16159482-16176898 chr1:16160692-16177092 chr1:16160486-16177073 chr1:16158840-16179522 chr1:16161668-16164106 chr1:16159273-16177143 chr1:16142470-16194125 chr1:16160114-16176905 chr1:16158631-16177473 chr1:16152799-16178983 chr1:16158022-16176901 chr1:16159271-16176909 chr1:16159371-16178162 chr1:16160623-16176873 chr1:16159526-16177337 chr1:16158415-16177489 chr1:16154502-16165640 chr1:16170997-16177280

Enhancer:

chr1:16533710-16534010 chr1:16085340-16085990 chr1:16352740-16353030 chr1:16353110-16353190 chr1:16353270-16353800 chr1:16235980-16237590 chr1:16382250-16382910 chr1:16237800-16237870 chr1:16351390-16352600 chr1:16350890-16351250 chr1:16055690-16056290 chr1:16247480-16248740 chr1:16363380-16363680 chr1:15790020-15792490 chr1:16246010-16247360 chr1:16266950-16268360 chr1:16268750-16268820 chr1:16268940-16269020 chr1:16380270-16381920 chr1:16382020-16382160 chr1:16386550-16388180 chr1:16390850-16391710 chr1:16393230-16395550 chr1:16396300-16397430 chr1:16398570-16399910 chr1:16517330-16517700 chr1:16517970-16519020 chr1:16532840-16533440 chr1:16711000-16711450 chr1:16269230-16269550 chr1:16693800-16696290 chr1:16711600-16713540 chr1:16063360-16063990 chr1:16273620-16274780 chr1:16359020-16359660 chr1:16277830-16279650 chr1:16279660-16281500 chr1:16472180-16473730 chr1:16507270-16509450 chr1:16504620-16506090 chr1:16506420-16506690 chr1:16509640-16510060 chr1:16701350-16703180 chr1:16703210-16705320 chr1:16705800-16706170 chr1:16710560-16710780 chr1:16264140-16264300 chr1:16264500-16265210 chr1:16359750-16360100 chr1:16385210-16385980 chr1:16291500-16293420 chr1:16242780-16243910 chr1:16243990-16245420 chr1:16245550-16245890 chr1:16073550-16074040 chr1:16375740-16376110 chr1:16262760-16263650 chr1:16265370-16265790 chr1:16269690-16269890 chr1:16270020-16270090 chr1:16270210-16270300 chr1:16270390-16270790 chr1:16271700-16272200 chr1:16272340-16272640 chr1:15876110-15876710 chr1:16073060-16073360 chr1:15684780-15686970 chr1:15752520-15753640 chr1:15788150-15789220 chr1:15789360-15789880 chr1:16531670-16531840 chr1:16534720-16535130 chr1:16383820-16384260 chr1:16069140-16069320 chr1:16330880-16332410 chr1:15651060-15653550 chr1:15653640-15654770 chr1:15668390-15669480 chr1:15679770-15681740 chr1:15682440-15684600 chr1:15944300-15946370 chr1:15946440-15947030 chr1:16017040-16019390 chr1:16040440-16042160 chr1:16091730-16093870 chr1:16113080-16114430 chr1:16124160-16124660 chr1:16129510-16131150 chr1:16146910-16147660 chr1:16208540-16210640 chr1:16228720-16230200 chr1:16248840-16251080 chr1:16251230-16251800 chr1:16275430-16277780 chr1:16282240-16283370 chr1:16288070-16289560 chr1:16414110-16416130 chr1:16447370-16448020 chr1:16532580-16532670 chr1:16534090-16534160 chr1:16534270-16534430 chr1:16587240-16587720 chr1:16650060-16651760 chr1:16697130-16698040 chr1:16698150-16699760 chr1:16700100-16701300 chr1:16219280-16220970 chr1:16417220-16419640 chr1:16342260-16343490 chr1:15556140-15556910 chr1:15573890-15576140 chr1:15586650-15589110 chr1:15610910-15612370 chr1:15633940-15635100 chr1:15635230-15637020 chr1:15656040-15656570 chr1:15667620-15668230 chr1:15672020-15674510 chr1:15692430-15692760 chr1:15692810-15693680 chr1:15749390-15751800 chr1:15753780-15755080 chr1:15884570-15886020 chr1:16105830-16108230 chr1:16223310-16225030 chr1:16408200-16410650 chr1:16453390-16454210 chr1:16454240-16455730 chr1:16457550-16457830 chr1:16464680-16464760 chr1:16475540-16477390 chr1:16493230-16493460 chr1:16532160-16532420 chr1:16717910-16719720 chr1:16660800-16663200 chr1:16376200-16376300 chr1:15948530-15949780 chr1:16117880-16120160 chr1:16186810-16187120 chr1:15745070-15746670 chr1:16056420-16056690 chr1:16443850-16444670 chr1:16626420-16628020 chr1:16319520-16321760 chr1:16419940-16422390 chr1:16945600-16946330 chr1:16952500-16952840 chr1:16953000-16953630 chr1:16955150-16957380 chr1:16972170-16972860 chr1:17019010-17019890 chr1:17019930-17021350 chr1:17023190-17023270 chr1:17023420-17024160 chr1:17026120-17026350 chr1:17030640-17031690 chr1:17122630-17125080 chr1:17039150-17040770 chr1:16226150-16228130 chr1:16436900-16437520 chr1:15786410-15786910 chr1:16033770-16034530 chr1:16047880-16049850 chr1:16480930-16482340 chr1:15904360-15905350 chr1:15905550-15906580 chr1:16043310-16044380 chr1:16044490-16045030 chr1:16045120-16046220 chr1:16046420-16047300 chr1:16052040-16053500 chr1:16193330-16194560 chr1:16300220-16302470

Promoter:

chr1:16174202-16266951

 ChIP-seq based regulatory details of SPEN
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
 Downstream target genes of SPEN
 Protein-protein interaction of SPEN
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
SPEN NCOR2 Affinity Capture-Western 11331609 9606 9606 BIOGRID
SPEN HDAC1 Affinity Capture-Western 11331609 9606 9606 BIOGRID
SPEN NCOR2 Reconstituted Complex 11331609 9606 9606 BIOGRID
SPEN HDAC1 Reconstituted Complex 11331609 9606 9606 BIOGRID
SPEN SRA1 Reconstituted Complex 11331609 9606 9606 BIOGRID
SPEN SRA1 Affinity Capture-Western 11331609 9606 9606 BIOGRID
SPEN CTBP1 Affinity Capture-Western 16287852 9606 9606 BIOGRID
SPEN CTBP1 Reconstituted Complex 16287852 9606 9606 BIOGRID
SPEN RBBP8 Reconstituted Complex 16287852 9606 9606 BIOGRID
SPEN RBBP8 Affinity Capture-Western 16287852 9606 9606 BIOGRID
SPEN RUNX1T1 Protein-peptide 18332109 9606 9606 BIOGRID
SPEN RUNX1 Protein-peptide 18332109 9606 9606 BIOGRID
SPEN RUNX1T1 Affinity Capture-Western 18332109 9606 9606 BIOGRID
SPEN RBPJ Co-fractionation 18332109 9606 9606 BIOGRID
SPEN RUNX1T1 Co-fractionation 18332109 9606 9606 BIOGRID
SPEN RUNX1T1 Two-hybrid 18332109 9606 9606 BIOGRID
SPEN UBE2E2 Two-hybrid 16583136 9606 9606 BIOGRID
SPEN UBE2L6 Two-hybrid 16583136 9606 9606 BIOGRID
SPEN UBE2E2 Reconstituted Complex 16583136 9606 9606 BIOGRID
SPEN UBE2L6 Reconstituted Complex 16583136 9606 9606 BIOGRID
SPEN UBE2E2 Affinity Capture-Western 16583136 9606 9606 BIOGRID
SPEN UBE2L6 Affinity Capture-Western 16583136 9606 9606 BIOGRID
SPEN NOTCH2 Co-fractionation 22939629 9606 9606 BIOGRID
SPEN BPGM Co-fractionation 22939629 9606 9606 BIOGRID
SPEN TTN Co-fractionation 22939629 9606 9606 BIOGRID
SPEN PRDX3 Co-fractionation 22939629 9606 9606 BIOGRID
SPEN PCBP3 Co-fractionation 22939629 9606 9606 BIOGRID
SPEN NUP54 Co-fractionation 22939629 9606 9606 BIOGRID
SPEN PIR Co-fractionation 22939629 9606 9606 BIOGRID
SPEN SCYL2 Co-fractionation 22939629 9606 9606 BIOGRID
SPEN DAXX Affinity Capture-MS 24981860 9606 9606 BIOGRID
 Annotation of SPEN
 TCGA cancer survival map of SPEN


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  SPEN