TcoF overview
TcoF: SSBP3
GeneID: 6758
Name: Single-stranded DNA-binding protein 3
Ensembl: ENSG00000157216
Species: Human
Class: class 3
Family: Others
Disease: 0
Go term: 12
Pathway: --
Hallmark: --
Super Enhancer:

chr1:54872669-54878048 chr1:54872639-54876297 chr1:54918317-54957598 chr1:54917800-54957391 chr1:54788810-54805119 chr1:54739184-54764172 chr1:54840903-54858275 chr1:54737632-54741537 chr1:54871977-54875314 chr1:54737930-54765564 chr1:54736163-54748807 chr1:54788975-54804896 chr1:54737634-54803048 chr1:54800339-54846864 chr1:54869209-54876848 chr1:54737821-54809140 chr1:54725885-54852966 chr1:54738044-54765014 chr1:54738202-54851441 chr1:54737694-54823212 chr1:54737622-54747342 chr1:54734230-54875331 chr1:54685137-54887720 chr1:54840117-54875087 chr1:54790308-54802564 chr1:54788429-54822831 chr1:54841344-54880096 chr1:54734217-54779046 chr1:54734079-54814659 chr1:54733581-54807274 chr1:54736173-54803019 chr1:54737389-54802685 chr1:54736560-54875624 chr1:54734279-54803108 chr1:54735836-54826464 chr1:54738157-54838518 chr1:54727793-54764633 chr1:54778006-54880030 chr1:54734397-54802735 chr1:54715179-54879992 chr1:54736302-54779194 chr1:54733847-54802451 chr1:54736375-54765964 chr1:54737030-54802801 chr1:54734143-54802685 chr1:54734389-54829219 chr1:54845199-54880168 chr1:54820157-54876227 chr1:54728431-54878247 chr1:54742861-54778959 chr1:54822744-54874576 chr1:54747658-54754396 chr1:54736995-54742924 chr1:54738261-54857473 chr1:54738212-54878086 chr1:54754617-54803158 chr1:54819177-54875147 chr1:54763588-54876146 chr1:54774546-54817037 chr1:54756146-54823249 chr1:54778115-54823583 chr1:54734366-54843477 chr1:54726364-54824743 chr1:54841039-54876473 chr1:54869227-54876205 chr1:54738187-54797657 chr1:54792708-54809101 chr1:54841469-54846499 chr1:54790575-54846632 chr1:54754700-54809827 chr1:54738719-54793806 chr1:54739989-54780908 chr1:54684137-54720548 chr1:54870392-54875966 chr1:54684522-54779591 chr1:54719498-54779586 chr1:54741540-54757338 chr1:54742149-54759265 chr1:54684546-54720926 chr1:54735859-54754566 chr1:54736631-54754447 chr1:54734733-54765588 chr1:54778653-54809489 chr1:54735239-54828690 chr1:54745085-54757152 chr1:54867625-54883696 chr1:54737629-54802814 chr1:54711779-54846820 chr1:54868256-54881203 chr1:54719201-54824657 chr1:54869300-54883258 chr1:54756683-54824839 chr1:54684501-54741781 chr1:54839297-54880469 chr1:54774739-54799337 chr1:54710042-54824774 chr1:54684303-54742169 chr1:54754878-54823432 chr1:54755784-54796118 chr1:54750910-54801777 chr1:54737593-54799447 chr1:54751737-54798530 chr1:54693121-54722935 chr1:54738234-54829475 chr1:54737480-54824688 chr1:54738390-54802685 chr1:54737818-54799076 chr1:54737709-54765800 chr1:54751842-54799116 chr1:54737468-54845457 chr1:54737501-54824153 chr1:54737552-54843096 chr1:54752938-54797929 chr1:54738041-54799216 chr1:54738791-54798744 chr1:54751891-54799150 chr1:54737034-54756893 chr1:54774531-54823390 chr1:54841212-54879454 chr1:54737996-54823240 chr1:54738175-54803183 chr1:54836771-54895432 chr1:54836724-54883969 chr1:54738556-54766576 chr1:54738182-54766327 chr1:54712525-54809585 chr1:54737236-54758000 chr1:54736486-54809670 chr1:54823781-54879785 chr1:54791588-54809597 chr1:54737224-54771723 chr1:54736733-54809902 chr1:54710116-54809012 chr1:54701767-54712602 chr1:54791588-54809597 chr1:54737224-54771723 chr1:54788544-54851635 chr1:54712987-54726845 chr1:54924995-54955120 chr1:54927236-54957144 chr1:54926916-54956033 chr1:54924481-54957073 chr1:54926935-54955803 chr1:54927304-54955472 chr1:54922472-54956830 chr1:54918617-54965860 chr1:54927667-54955494 chr1:54928966-54956753 chr1:54930301-54955369 chr1:54924222-54955312 chr1:54936899-54948115 chr1:54928201-54955803 chr1:54928772-54955977 chr1:54924694-54957133 chr1:54922408-54955192 chr1:54918071-54965888 chr1:54924512-54955755 chr1:54927346-54956120 chr1:54927647-54955937 chr1:54927852-54955427 chr1:54927643-54955408 chr1:54928192-54955305

Enhancer:

chr1:54870600-54871620 chr1:55140330-55141040 chr1:55277600-55277710 chr1:54798820-54799460 chr1:54819060-54820930 chr1:54754750-54755120 chr1:54755790-54757980 chr1:54758000-54758730 chr1:54794780-54794950 chr1:54795050-54796690 chr1:54817840-54818370 chr1:54755140-54755730 chr1:54692830-54693920 chr1:55321740-55323240 chr1:54647400-54647870 chr1:53877910-53880060 chr1:53964240-53965340 chr1:53977310-53978840 chr1:53991340-53993320 chr1:54015500-54016980 chr1:54037750-54039060 chr1:54040200-54042190 chr1:54055500-54057160 chr1:54085370-54087360 chr1:54108830-54109290 chr1:54117810-54119760 chr1:54124780-54125300 chr1:54134690-54136800 chr1:54143490-54145720 chr1:54153460-54154360 chr1:54162960-54164580 chr1:54363930-54365790 chr1:54421450-54423820 chr1:54446930-54449310 chr1:54481340-54483040 chr1:54513050-54514270 chr1:54633070-54633730 chr1:54684450-54686610 chr1:54687130-54687450 chr1:54694500-54696970 chr1:54710820-54712660 chr1:54718320-54720660 chr1:54759880-54761570 chr1:54778080-54779560 chr1:54807370-54809560 chr1:54850370-54852440 chr1:54852490-54852860 chr1:55014020-55016250 chr1:55228450-55230130 chr1:54885970-54888130 chr1:55033270-55034000 chr1:54774550-54776130 chr1:54812970-54815180 chr1:54849010-54849620 chr1:54870310-54870530 chr1:54480040-54481050 chr1:54481100-54481250 chr1:54628500-54629880 chr1:54428770-54429840 chr1:54600880-54602740 chr1:54827790-54829040 chr1:54893940-54896090 chr1:54929400-54931530 chr1:55044480-55046140 chr1:55181690-55182270 chr1:55240260-55241340 chr1:55341720-55341830 chr1:54493060-54495460 chr1:54771430-54772420 chr1:54394770-54395670 chr1:54787200-54788180 chr1:54882150-54883250 chr1:54883620-54884560 chr1:54762180-54762560

Promoter:

chr1:54691105-54879152

 ChIP-seq based regulatory details of SSBP3
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
 Downstream target genes of SSBP3
 Protein-protein interaction of SSBP3
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
SSBP3 ANKEF1 Two-hybrid 20211142 9606 9606 BIOGRID
SSBP3 APP Reconstituted Complex 21832049 9606 9606 BIOGRID
SSBP3 IL36RN Two-hybrid 25416956 9606 9606 BIOGRID
SSBP3 TBC1D23 Two-hybrid 25416956 9606 9606 BIOGRID
SSBP3 NXT2 Two-hybrid 25416956 9606 9606 BIOGRID
SSBP3 LDB1 Affinity Capture-MS 26186194 9606 9606 BIOGRID
SSBP3 DIS3 Affinity Capture-MS 26186194 9606 9606 BIOGRID
SSBP3 LHX1 Affinity Capture-MS 26186194 9606 9606 BIOGRID
SSBP3 ISL2 Affinity Capture-MS 26186194 9606 9606 BIOGRID
SSBP3 ISL1 Affinity Capture-MS 26186194 9606 9606 BIOGRID
SSBP3 LMO4 Affinity Capture-MS 26186194 9606 9606 BIOGRID
SSBP3 ISL2 Affinity Capture-MS 28514442 9606 9606 BIOGRID
SSBP3 LDB1 Affinity Capture-MS 28514442 9606 9606 BIOGRID
SSBP3 ISL1 Affinity Capture-MS 28514442 9606 9606 BIOGRID
SSBP3 LMO4 Affinity Capture-MS 28514442 9606 9606 BIOGRID
SSBP3 DIS3 Affinity Capture-MS 28514442 9606 9606 BIOGRID
SSBP3 LHX1 Affinity Capture-MS 28514442 9606 9606 BIOGRID
SSBP3 SIVA1 Affinity Capture-Western 30363057 9606 9606 BIOGRID
SSBP3 SIVA1 Reconstituted Complex 30363057 9606 9606 BIOGRID
SSBP3 BANF1 Affinity Capture-MS 30833792 9606 9606 BIOGRID
SSBP3 CUX1 Affinity Capture-MS 30833792 9606 9606 BIOGRID
SSBP3 ISL2 Affinity Capture-MS 30833792 9606 9606 BIOGRID
SSBP3 LDB1 Affinity Capture-MS 30833792 9606 9606 BIOGRID
SSBP3 LEMD2 Affinity Capture-MS 30833792 9606 9606 BIOGRID
SSBP3 LHX2 Affinity Capture-MS 30833792 9606 9606 BIOGRID
SSBP3 LMO4 Affinity Capture-MS 30833792 9606 9606 BIOGRID
SSBP3 LMX1B Affinity Capture-MS 30833792 9606 9606 BIOGRID
SSBP3 S100A6 Affinity Capture-MS 30833792 9606 9606 BIOGRID
SSBP3 SSBP1 Affinity Capture-MS 30833792 9606 9606 BIOGRID
SSBP3 SSBP2 Affinity Capture-MS 30833792 9606 9606 BIOGRID
SSBP3 SSBP4 Affinity Capture-MS 30833792 9606 9606 BIOGRID
SSBP3 TMPO Affinity Capture-MS 30833792 9606 9606 BIOGRID
SSBP3 YES1 Two-hybrid 32296183 9606 9606 BIOGRID
SSBP3 SS18L1 Two-hybrid 32296183 9606 9606 BIOGRID
SSBP3 LDB1 Two-hybrid 32296183 9606 9606 BIOGRID
SSBP3 XRN2 Affinity Capture-MS 30833792 9606 9606 BIOGRID
SSBP3 XRCC1 Affinity Capture-MS 30833792 9606 9606 BIOGRID
SSBP3 ISL2 Affinity Capture-MS 24981860 9606 9606 BIOGRID
SSBP3 LHX4 Affinity Capture-MS 24981860 9606 9606 BIOGRID
 Annotation of SSBP3
 TCGA cancer survival map of SSBP3


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  SSBP3