TcoF overview
TcoF: SSU72
GeneID: 22954
Name: RNA polymerase II subunit A C-terminal domain phosphatase SSU72
Ensembl: ENSG00000160075
Species: Human
Class: class 1
Family: Others
Disease: 0
Go term: 7
Pathway: --
Hallmark: --
Super Enhancer:

chr1:1501929-1535829 chr1:1494716-1511509 chr1:1499623-1511548

Enhancer:

chr1:1309830-1310080 chr1:1310170-1310370 chr1:1342400-1342510 chr1:1622830-1623880 chr1:1273820-1273900 chr1:1274030-1274740 chr1:1323980-1325600 chr1:1573950-1575630 chr1:1686140-1686810 chr1:1723320-1724680 chr1:1745520-1747190 chr1:1890650-1891400 chr1:1918480-1919950 chr1:1551480-1551880 chr1:1676110-1677160 chr1:1271900-1273350 chr1:1274820-1274960 chr1:1341270-1342280 chr1:1606060-1606900 chr1:1607030-1607500 chr1:1695080-1696660 chr1:1849870-1850330 chr1:1850370-1850480 chr1:1850520-1850620 chr1:2121220-2123330 chr1:2125570-2126120 chr1:2132660-2134870 chr1:2488170-2488410 chr1:1654270-1655690 chr1:1230940-1231110 chr1:1273560-1273640 chr1:1309280-1309370 chr1:1347690-1350080 chr1:1573250-1573860 chr1:1597460-1599760 chr1:1897970-1900070 chr1:1942640-1944570 chr1:1959730-1960540 chr1:1995950-1996740 chr1:1227410-1227760 chr1:2149160-2149740 chr1:1154630-1155340 chr1:1157280-1158620 chr1:1160160-1162630 chr1:1207400-1209040 chr1:1226330-1226440 chr1:1226520-1226630 chr1:1238360-1238540 chr1:1238660-1238990 chr1:1354930-1355430 chr1:1355970-1356170 chr1:1356390-1356510 chr1:1471180-1473550 chr1:1475170-1475660 chr1:1552000-1554480 chr1:1708190-1709720 chr1:1803640-1806000 chr1:1963120-1965240 chr1:1407470-1409840 chr1:1473740-1475060 chr1:1489190-1491680 chr1:1422050-1423240 chr1:1934190-1935130 chr1:1216990-1217620 chr1:1217700-1219350 chr1:1221040-1221300 chr1:1237430-1238300 chr1:1252950-1254670 chr1:1266920-1267010 chr1:1268190-1268300 chr1:1268500-1268630 chr1:1269840-1270650 chr1:1560570-1560660 chr1:1561030-1561490 chr1:1561500-1562020 chr1:1688810-1689800 chr1:948960-949360 chr1:1292080-1293830 chr1:874840-876520 chr1:876690-877510 chr1:1361820-1362930 chr1:1672000-1672860 chr1:1603070-1604240 chr1:1289490-1289570 chr1:1289610-1289730 chr1:1448070-1450240 chr1:1763720-1766140 chr1:1793920-1795080 chr1:1795730-1796590 chr1:1730600-1732770 chr1:1777630-1779810 chr1:878440-878630 chr1:911650-911870 chr1:955750-957580 chr1:1018370-1019730 chr1:1019760-1019860 chr1:1019880-1021250 chr1:1021390-1022510 chr1:1025810-1026850 chr1:1116240-1117120 chr1:1229090-1229200 chr1:1229310-1229460 chr1:1290530-1290620 chr1:1291130-1292060 chr1:1315820-1316660 chr1:1419150-1420390 chr1:1470890-1470960 chr1:1559080-1559150 chr1:1599910-1601100 chr1:1631950-1632340 chr1:1888220-1890550 chr1:2091450-2093450 chr1:2114930-2115890 chr1:2118650-2120980 chr1:1014690-1017190 chr1:853100-853400 chr1:853560-854200 chr1:854300-854710 chr1:861180-861300 chr1:865720-866410 chr1:874510-874650 chr1:877630-877780 chr1:877870-877930 chr1:878760-879070 chr1:879190-879280 chr1:880180-880430 chr1:880530-880890 chr1:881030-881550 chr1:881670-881780 chr1:881930-883510 chr1:887980-888550 chr1:888670-889160 chr1:902000-902080 chr1:934810-934900 chr1:934990-935070 chr1:1225770-1225850 chr1:1225940-1226010 chr1:1226080-1226270 chr1:1236550-1237360 chr1:1254900-1255140 chr1:1267320-1267400 chr1:1268760-1268880 chr1:1289890-1290060 chr1:1290730-1290820 chr1:949920-950500 chr1:912000-914260 chr1:976260-976550 chr1:1216680-1216790 chr1:1740500-1741350 chr1:2105460-2106190 chr1:1900270-1901900 chr1:1179490-1179570 chr1:1179660-1179760 chr1:1179880-1181890 chr1:1216050-1216600 chr1:2138110-2138990 chr1:1049620-1051430 chr1:1193850-1194850 chr1:1198760-1200160 chr1:1205040-1207310 chr1:1396300-1397970 chr1:1592160-1592930 chr1:1617550-1619720 chr1:2106270-2106660 chr1:2125350-2125430 chr1:2162320-2164640 chr1:1089220-1089880 chr1:1500830-1501170 chr1:1706710-1708020 chr1:1920410-1922320 chr1:2170690-2172940 chr1:861390-863620 chr1:930760-932120 chr1:984000-984240 chr1:985970-986100 chr1:986220-986630 chr1:987200-989130 chr1:1007960-1009390 chr1:1044640-1046420 chr1:1078010-1078110 chr1:1083990-1084200 chr1:1084600-1086380 chr1:1109310-1109660 chr1:1109700-1109800 chr1:1224250-1225650 chr1:1339880-1341180 chr1:1788580-1789190 chr1:1811990-1814120 chr1:2051880-2053270 chr1:2124420-2125070 chr1:2234840-2235270 chr1:932170-934340 chr1:1079440-1081800 chr1:1932250-1934150 chr1:778980-780370 chr1:890640-890970 chr1:906780-907450 chr1:976780-976850 chr1:1115980-1116110 chr1:1230200-1230820 chr1:1231320-1231390 chr1:1748450-1749080 chr1:1507550-1509860 chr1:906590-906700 chr1:1819000-1819160 chr1:1132570-1132810 chr1:1847180-1847870 chr1:1121240-1123210 chr1:1195100-1197280 chr1:1982140-1984600 chr1:1493870-1496030 chr1:1496990-1498550 chr1:1499170-1500150 chr1:2018970-2020830 chr1:2086610-2087430 chr1:2108090-2109280 chr1:2234540-2234720 chr1:2341890-2343820 chr1:1814270-1815460 chr1:1140870-1141760 chr1:1789340-1791750 chr1:1560280-1560370 chr1:1720710-1721650 chr1:1724750-1725480 chr1:1755080-1756240

Promoter:

chr1:1477053-1510243

 ChIP-seq based regulatory details of SSU72
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
TcoF_00_20311 SSU72 cell line H1 GSM1503826 Embryo Cistrome
 Downstream target genes of SSU72
 Protein-protein interaction of SSU72
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
SSU72 RAD21 Affinity Capture-Western 20818333 9606 9606 BIOGRID
SSU72 STAG2 Affinity Capture-Western 20818333 9606 9606 BIOGRID
SSU72 SMC1A Affinity Capture-Western 20818333 9606 9606 BIOGRID
SSU72 SMC3 Affinity Capture-Western 20818333 9606 9606 BIOGRID
SSU72 STAG2 Biochemical Activity 20818333 9606 9606 BIOGRID
SSU72 ACAT2 Co-fractionation 22939629 9606 9606 BIOGRID
SSU72 STXBP2 Co-fractionation 22939629 9606 9606 BIOGRID
SSU72 VCL Co-fractionation 22939629 9606 9606 BIOGRID
SSU72 XPO1 Co-fractionation 22939629 9606 9606 BIOGRID
SSU72 PTGES3 Co-fractionation 22939629 9606 9606 BIOGRID
SSU72 THOP1 Co-fractionation 22939629 9606 9606 BIOGRID
SSU72 UBE2H Co-fractionation 22939629 9606 9606 BIOGRID
SSU72 TIPRL Co-fractionation 22939629 9606 9606 BIOGRID
SSU72 TPI1 Co-fractionation 22939629 9606 9606 BIOGRID
SSU72 POLR2A Biochemical Activity 20861839 9606 9606 BIOGRID
SSU72 POLR2A Protein-peptide 20861839 9606 9606 BIOGRID
SSU72 POLR2A Co-crystal Structure 20861839 9606 9606 BIOGRID
SSU72 CPSF1 Affinity Capture-MS 27880917 9606 9606 BIOGRID
SSU72 CPSF2 Affinity Capture-MS 27880917 9606 9606 BIOGRID
SSU72 CPSF3 Affinity Capture-MS 27880917 9606 9606 BIOGRID
SSU72 CSTF2 Affinity Capture-MS 27880917 9606 9606 BIOGRID
SSU72 CSTF3 Affinity Capture-MS 27880917 9606 9606 BIOGRID
SSU72 HIST2H2AA4 Affinity Capture-MS 27880917 9606 9606 BIOGRID
SSU72 HNRNPL Affinity Capture-MS 27880917 9606 9606 BIOGRID
SSU72 SYMPK Affinity Capture-MS 27880917 9606 9606 BIOGRID
SSU72 CDKN2AIP Proximity Label-MS 27880917 9606 9606 BIOGRID
SSU72 CSTF2 Proximity Label-MS 27880917 9606 9606 BIOGRID
SSU72 SYMPK Proximity Label-MS 27880917 9606 9606 BIOGRID
SSU72 ZNF638 Proximity Label-MS 27880917 9606 9606 BIOGRID
SSU72 NCOA5 Proximity Label-MS 27880917 9606 9606 BIOGRID
SSU72 PCF11 Proximity Label-MS 27880917 9606 9606 BIOGRID
SSU72 ELP5 Proximity Label-MS 27880917 9606 9606 BIOGRID
SSU72 RPO21 Biochemical Activity 24413056 9606 559292 BIOGRID
 Annotation of SSU72
 TCGA cancer survival map of SSU72


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  SSU72