TcoF overview
TcoF: SUB1
GeneID: 6829
Name: Activated RNA polymerase II transcriptional coactivator p15
Ensembl: ENSG00000113387
Species: Human
Class: class HC
Family: PC4
Disease: 0
Go term: 14
Pathway: --
Hallmark: --
Super Enhancer:

chr5:32530301-32546533 chr5:32523355-32543273 chr5:32522361-32542943 chr5:32530274-32546400 chr5:32566510-32586969 chr5:32570687-32592609 chr5:32563844-32606295

--
Enhancer:

chr5:32444440-32444730 chr5:32599180-32601110 chr5:32171640-32173920 chr5:32310550-32312860 chr5:32442110-32444340 chr5:32027180-32028840 chr5:32370260-32370730 chr5:32473890-32475260 chr5:32475340-32476160 chr5:32507420-32508840 chr5:31988000-31989190 chr5:32810340-32812380 chr5:32813800-32815520 chr5:32831290-32832640 chr5:32542220-32543730 chr5:32166490-32166700 chr5:32217340-32219330 chr5:32280710-32281400 chr5:32541110-32542030 chr5:32573840-32576140 chr5:32537220-32539340 chr5:32388780-32390380 chr5:32784990-32786330 chr5:32028970-32030610 chr5:32170230-32171620 chr5:32223940-32226170 chr5:32234040-32235060 chr5:32691060-32693340 chr5:32712650-32715060 chr5:32805260-32807440 chr5:32984800-32985640 chr5:33104790-33106330 chr5:32390540-32392930 chr5:32767670-32769430 chr5:31913280-31914330 chr5:31935640-31936200 chr5:31944720-31945460 chr5:31983760-31985090 chr5:31989680-31991950 chr5:31992600-31994100 chr5:32030780-32031410 chr5:32032270-32034320 chr5:32058210-32059340 chr5:32059460-32061100 chr5:32146940-32148520 chr5:32189770-32191010 chr5:32202080-32203220 chr5:32254950-32255790 chr5:32255880-32256390 chr5:32522500-32523770 chr5:32596970-32597700 chr5:32627240-32629230 chr5:32960060-32961240 chr5:32013500-32015000 chr5:32248980-32251150 chr5:32276850-32278990 chr5:32324600-32326850 chr5:32413100-32415070 chr5:32260190-32262670 chr5:31921190-31923300 chr5:31933550-31934770 chr5:31943300-31943620 chr5:32221830-32223910 chr5:31915940-31917480 chr5:32098740-32101210 chr5:31947590-31948060 chr5:31948210-31948480 chr5:31888790-31890170 chr5:31962250-31964530 chr5:32127920-32128150 chr5:32286900-32287170 chr5:32299060-32300370 chr5:32585730-32588180

--
Promoter:

chr5:32531739-32604185

False
 ChIP-seq based regulatory details of SUB1
select * from encode where Experiment_target='SUB1'
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
 Downstream target genes of SUB1
 Protein-protein interaction of SUB1
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
SUB1 SUB1 Co-crystal Structure 9360603 9606 9606 BIOGRID
SUB1 PSIP1 Far Western 9885563 9606 9606 BIOGRID
SUB1 REST Co-localization 20080105 9606 9606 BIOGRID
SUB1 RCOR1 Co-localization 20080105 9606 9606 BIOGRID
SUB1 REST Affinity Capture-Western 20080105 9606 9606 BIOGRID
SUB1 RCOR1 Affinity Capture-Western 20080105 9606 9606 BIOGRID
SUB1 POLR2A Reconstituted Complex 10024883 9606 9606 BIOGRID
SUB1 POLR2B Reconstituted Complex 10024883 9606 9606 BIOGRID
SUB1 APP Reconstituted Complex 21832049 9606 9606 BIOGRID
SUB1 SUB1 Two-hybrid 25416956 9606 9606 BIOGRID
SUB1 ABCF1 Co-fractionation 26344197 9606 9606 BIOGRID
SUB1 CHD5 Co-fractionation 26344197 9606 9606 BIOGRID
SUB1 EIF1AX Co-fractionation 26344197 9606 9606 BIOGRID
SUB1 EIF2S2 Co-fractionation 26344197 9606 9606 BIOGRID
SUB1 EIF2S3 Co-fractionation 26344197 9606 9606 BIOGRID
SUB1 NACA Co-fractionation 26344197 9606 9606 BIOGRID
SUB1 NOLC1 Co-fractionation 26344197 9606 9606 BIOGRID
SUB1 POLR3C Co-fractionation 26344197 9606 9606 BIOGRID
SUB1 SART1 Co-fractionation 26344197 9606 9606 BIOGRID
SUB1 SBNO1 Co-fractionation 26344197 9606 9606 BIOGRID
SUB1 SET Co-fractionation 26344197 9606 9606 BIOGRID
SUB1 SRRM2 Co-fractionation 26344197 9606 9606 BIOGRID
SUB1 SRSF1 Co-fractionation 26344197 9606 9606 BIOGRID
SUB1 SRSF2 Co-fractionation 26344197 9606 9606 BIOGRID
SUB1 SRSF6 Co-fractionation 26344197 9606 9606 BIOGRID
SUB1 SUPT5H Co-fractionation 26344197 9606 9606 BIOGRID
SUB1 TPM2 Co-fractionation 26344197 9606 9606 BIOGRID
SUB1 TSR1 Co-fractionation 26344197 9606 9606 BIOGRID
SUB1 COPZ1 Affinity Capture-MS 27173435 9606 9606 BIOGRID
SUB1 SARNP Affinity Capture-MS 27173435 9606 9606 BIOGRID
SUB1 CHORDC1 Affinity Capture-MS 27173435 9606 9606 BIOGRID
SUB1 DIS3 Affinity Capture-MS 27173435 9606 9606 BIOGRID
SUB1 SEPT7 Affinity Capture-MS 27173435 9606 9606 BIOGRID
SUB1 PRCC Affinity Capture-MS 27173435 9606 9606 BIOGRID
SUB1 CDK5 Affinity Capture-MS 27173435 9606 9606 BIOGRID
SUB1 SH3GLB1 Affinity Capture-MS 27173435 9606 9606 BIOGRID
SUB1 SCYL2 Affinity Capture-MS 27173435 9606 9606 BIOGRID
SUB1 DRG1 Affinity Capture-MS 27173435 9606 9606 BIOGRID
SUB1 SUB1 Two-hybrid 32296183 9606 9606 BIOGRID
SUB1 SDCBP Two-hybrid 32296183 9606 9606 BIOGRID
SUB1 TOP3B Affinity Capture-MS 24981860 9606 9606 BIOGRID
SUB1 SUB1 Far Western 19706510 9606 559292 BIOGRID
 Annotation of SUB1
 TCGA cancer survival map of SUB1


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  SUB1