TcoF overview
| TcoF: | SUDS3 | |
| GeneID: | 9913 | |
| Name: | Sin3 histone deacetylase corepressor complex component SDS3 | |
| Ensembl: | ENSG00000111707 | |
| Species: | Human | |
| Class: | class HC | |
| Family: | Other_Co-activator/repressors | |
| Disease: | 0 | |
| Go term: | 15 | |
| Pathway: | 2 | |
| Hallmark: | 1 | |
| Super Enhancer: |
chr12:118737551-118771769 chr12:118784402-118812012 chr12:118766303-118812842 chr12:118742411-118778589 chr12:118737406-118812099 chr12:118766504-118809436 chr12:118766608-118810869 chr12:118737887-118769470 chr12:118737465-118802988 chr12:118737542-118812082 chr12:118742256-118774208 chr12:118790310-118812806 chr12:118738559-118812746 chr12:118744294-118810903 chr12:118737683-118810855 chr12:119047669-119056996 chr12:119003806-119017085 chr12:119004330-119017906 |
|
| Enhancer: |
chr12:118423920-118426000 chr12:118539240-118541390 chr12:118488520-118490110 chr12:118574150-118575840 chr12:118815750-118817640 chr12:118404820-118405340 chr12:118496490-118498840 chr12:118454700-118455490 chr12:118625180-118627610 chr12:118808320-118809360 chr12:118473130-118474140 chr12:118583390-118584360 chr12:118612600-118615000 chr12:118642740-118644410 chr12:118842530-118843200 chr12:118472160-118472790 chr12:118472900-118473010 chr12:118673480-118675870 chr12:118744250-118746720 chr12:118796540-118797950 chr12:118675980-118677030 chr12:118737800-118738540 chr12:118739360-118741220 chr12:118765460-118766560 chr12:118767320-118769410 chr12:118874710-118875660 chr12:118981070-118982510 chr12:119060160-119061960 chr12:119088340-119089940 chr12:119144780-119146400 chr12:119211320-119213300 chr12:119229820-119230300 chr12:119287810-119288930 chr12:118979780-118981050 chr12:118850320-118851100 chr12:118873540-118874220 chr12:118991750-118992500 chr12:118995420-118996640 chr12:119019960-119021420 chr12:119046440-119048620 chr12:119048680-119049460 chr12:119207340-119208360 chr12:119250980-119252160 chr12:119443620-119445050 chr12:118627750-118629570 chr12:118764420-118765430 chr12:118773800-118775520 chr12:118798270-118799520 chr12:118344860-118345600 chr12:118526850-118527740 chr12:118535770-118538100 chr12:118847280-118848430 chr12:118855840-118857890 chr12:118575950-118577250 chr12:118839800-118841040 chr12:118870520-118871440 chr12:118769630-118771780 chr12:119026760-119027610 |
|
| Promoter: |
chr12:118814360-118855838 |
ChIP-seq based regulatory details of SUDS3
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|
Downstream target genes of SUDS3
Upstream regulatory details of SUDS3
Protein-protein interaction of SUDS3
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| SUDS3 | HDAC1 | Affinity Capture-Western | 12724404 | 9606 | 9606 | BIOGRID |
| SUDS3 | HDAC2 | Affinity Capture-Western | 12724404 | 9606 | 9606 | BIOGRID |
| SUDS3 | SIN3A | Affinity Capture-Western | 12724404 | 9606 | 9606 | BIOGRID |
| SUDS3 | SIN3A | Two-hybrid | 11909966 | 9606 | 9606 | BIOGRID |
| SUDS3 | SIN3B | Two-hybrid | 11909966 | 9606 | 9606 | BIOGRID |
| SUDS3 | SIN3A | Reconstituted Complex | 11909966 | 9606 | 9606 | BIOGRID |
| SUDS3 | SIN3B | Reconstituted Complex | 11909966 | 9606 | 9606 | BIOGRID |
| SUDS3 | SIN3A | Affinity Capture-Western | 11909966 | 9606 | 9606 | BIOGRID |
| SUDS3 | SIN3B | Affinity Capture-Western | 11909966 | 9606 | 9606 | BIOGRID |
| SUDS3 | SUDS3 | Reconstituted Complex | 11909966 | 9606 | 9606 | BIOGRID |
| SUDS3 | SUDS3 | Two-hybrid | 11909966 | 9606 | 9606 | BIOGRID |
| SUDS3 | HDAC1 | Affinity Capture-Western | 11909966 | 9606 | 9606 | BIOGRID |
| SUDS3 | CUL4B | Affinity Capture-Western | 25189618 | 9606 | 9606 | BIOGRID |
| SUDS3 | DDB1 | Affinity Capture-Western | 25189618 | 9606 | 9606 | BIOGRID |
| SUDS3 | USP17L2 | Affinity Capture-Western | 21239494 | 9606 | 9606 | BIOGRID |
| SUDS3 | SIN3A | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| SUDS3 | SIN3B | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| SUDS3 | HDAC1 | Affinity Capture-MS | 26186194 | 9606 | 9606 | BIOGRID |
| SUDS3 | SIN3B | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| SUDS3 | SIN3A | Affinity Capture-MS | 28514442 | 9606 | 9606 | BIOGRID |
| SUDS3 | GOLGA2 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| SUDS3 | LDOC1 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| SUDS3 | BRMS1L | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SUDS3 | MTA2 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SUDS3 | BCL11A | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SUDS3 | LIN9 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SUDS3 | BPTF | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SUDS3 | CHD3 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SUDS3 | MBD2 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SUDS3 | C17orf49 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SUDS3 | CDK2AP1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SUDS3 | GATAD2A | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SUDS3 | MTA1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SUDS3 | HAT1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SUDS3 | ZNF512B | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SUDS3 | SIN3A | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SUDS3 | RBBP4 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SUDS3 | SUZ12 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SUDS3 | CHD4 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SUDS3 | HDAC2 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SUDS3 | EZH2 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SUDS3 | SAP130 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SUDS3 | SMARCA1 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SUDS3 | CHD5 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
| SUDS3 | SMARCA5 | Affinity Capture-MS | 24981860 | 9606 | 9606 | BIOGRID |
Annotation of SUDS3
TCGA cancer survival map of SUDS3
Expression of SUDS3
Disease information of SUDS3