TcoF overview
TcoF: TCEA1
GeneID: 6919
Name: Transcription elongation factor A protein 1
Ensembl: ENSG00000187735
Species: Human
Class: NA
Family: TEF
Disease: 0
Go term: 10
Pathway: 16
Hallmark: 1
Super Enhancer:

chr8:54923402-54946252 chr8:54926120-54935590 chr8:54924492-54934783 chr8:54926091-54934484 chr8:54923601-54957395 chr8:54924134-54946647 chr8:54923496-54952169 chr8:54931888-54947563 chr8:54925704-54945849 chr8:54923356-54936436 chr8:54923284-54936739 chr8:54921655-54937002 chr8:54921899-54936987 chr8:54926262-54935302

Enhancer:

chr8:54891260-54891580 chr8:54899590-54900670 chr8:55013490-55013900 chr8:55330650-55331830 chr8:55333830-55335900 chr8:55248320-55249570 chr8:55180670-55182450 chr8:55047950-55049070 chr8:54982570-54984980 chr8:54881320-54882950 chr8:55086980-55087300 chr8:55104000-55105190 chr8:55167280-55168380 chr8:55171500-55172160 chr8:54553870-54555100 chr8:55172410-55173000 chr8:54690780-54692750 chr8:54897700-54899520 chr8:54865850-54866630 chr8:54908040-54909010 chr8:54754290-54755430 chr8:55064820-55067260 chr8:54925760-54927810 chr8:55005460-55007770 chr8:55083540-55085990 chr8:55294220-55296120 chr8:55124040-55124600 chr8:55192640-55193040 chr8:54521560-54522260 chr8:54604220-54606310 chr8:54753320-54754130 chr8:54928490-54929270 chr8:54640170-54641390 chr8:54750130-54750660 chr8:54815820-54816680 chr8:54851320-54852050 chr8:54869550-54870530 chr8:54435940-54437770 chr8:54530700-54532540 chr8:54793640-54795780 chr8:54796730-54799020 chr8:55062520-55064670 chr8:54784150-54785420 chr8:54708440-54708790 chr8:55185070-55185640

Promoter:

chr8:54879112-54935016

 ChIP-seq based regulatory details of TCEA1
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
 Downstream target genes of TCEA1
 Protein-protein interaction of TCEA1
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
TCEA1 POLR2A Reconstituted Complex 9765293 9606 9606 BIOGRID
TCEA1 GTF2H1 Reconstituted Complex 9765293 9606 9606 BIOGRID
TCEA1 CTDP1 Reconstituted Complex 9765293 9606 9606 BIOGRID
TCEA1 POLR2A Reconstituted Complex 9305922 9606 9606 BIOGRID
TCEA1 CDK8 Reconstituted Complex 9305922 9606 9606 BIOGRID
TCEA1 GTF2F1 Reconstituted Complex 9305922 9606 9606 BIOGRID
TCEA1 CDK7 Reconstituted Complex 9305922 9606 9606 BIOGRID
TCEA1 TBP Reconstituted Complex 9305922 9606 9606 BIOGRID
TCEA1 GTF2E1 Reconstituted Complex 9305922 9606 9606 BIOGRID
TCEA1 GTF2F2 Reconstituted Complex 9305922 9606 9606 BIOGRID
TCEA1 GTF2B Reconstituted Complex 9305922 9606 9606 BIOGRID
TCEA1 GTF2H1 Reconstituted Complex 9305922 9606 9606 BIOGRID
TCEA1 UBR5 Affinity Capture-MS 17643375 9606 9606 BIOGRID
TCEA1 SUPT6H Affinity Capture-MS 17643375 9606 9606 BIOGRID
TCEA1 POLR2A Affinity Capture-MS 17643375 9606 9606 BIOGRID
TCEA1 SF3B2 Affinity Capture-MS 17643375 9606 9606 BIOGRID
TCEA1 TCEA2 Affinity Capture-MS 17643375 9606 9606 BIOGRID
TCEA1 SF3B3 Affinity Capture-MS 17643375 9606 9606 BIOGRID
TCEA1 SF3A1 Affinity Capture-MS 17643375 9606 9606 BIOGRID
TCEA1 INTS1 Affinity Capture-MS 17643375 9606 9606 BIOGRID
TCEA1 POLR2B Affinity Capture-MS 17643375 9606 9606 BIOGRID
TCEA1 DDX5 Affinity Capture-MS 17643375 9606 9606 BIOGRID
TCEA1 SNRNP200 Affinity Capture-MS 17643375 9606 9606 BIOGRID
TCEA1 DDX46 Affinity Capture-MS 17643375 9606 9606 BIOGRID
TCEA1 LEO1 Reconstituted Complex 20178742 9606 9606 BIOGRID
TCEA1 PAF1 Reconstituted Complex 20178742 9606 9606 BIOGRID
TCEA1 CTR9 Reconstituted Complex 20178742 9606 9606 BIOGRID
TCEA1 CDC73 Reconstituted Complex 20178742 9606 9606 BIOGRID
TCEA1 RTF1 Reconstituted Complex 20178742 9606 9606 BIOGRID
TCEA1 WDR61 Reconstituted Complex 20178742 9606 9606 BIOGRID
TCEA1 POLR2A Affinity Capture-Western 20178742 9606 9606 BIOGRID
TCEA1 LEO1 Affinity Capture-Western 20178742 9606 9606 BIOGRID
TCEA1 PAF1 Affinity Capture-Western 20178742 9606 9606 BIOGRID
TCEA1 UBR5 Reconstituted Complex 21127351 9606 9606 BIOGRID
TCEA1 CDK9 Reconstituted Complex 21127351 9606 9606 BIOGRID
TCEA1 CDK9 Co-localization 21127351 9606 9606 BIOGRID
TCEA1 UBR5 Co-localization 21127351 9606 9606 BIOGRID
TCEA1 PAF1 Affinity Capture-Western 21596312 9606 9606 BIOGRID
TCEA1 APP Reconstituted Complex 21832049 9606 9606 BIOGRID
TCEA1 UBAC1 Co-fractionation 22939629 9606 9606 BIOGRID
TCEA1 MED26 Affinity Capture-Western 21729782 9606 9606 BIOGRID
TCEA1 GTF2E1 Co-purification 10454562 9606 9606 BIOGRID
TCEA1 CDK8 Co-purification 10454562 9606 9606 BIOGRID
TCEA1 TBP Co-purification 10454562 9606 9606 BIOGRID
TCEA1 GTF2H1 Co-purification 10454562 9606 9606 BIOGRID
TCEA1 GTF2F1 Co-purification 10454562 9606 9606 BIOGRID
TCEA1 GTF2B Co-purification 10454562 9606 9606 BIOGRID
TCEA1 MCM2 Co-purification 10454562 9606 9606 BIOGRID
TCEA1 MCM3 Co-purification 10454562 9606 9606 BIOGRID
TCEA1 MCM5 Co-purification 10454562 9606 9606 BIOGRID
TCEA1 BCCIP Co-fractionation 22863883 9606 9606 BIOGRID
TCEA1 CHORDC1 Co-fractionation 22863883 9606 9606 BIOGRID
TCEA1 CSE1L Co-fractionation 22863883 9606 9606 BIOGRID
TCEA1 LDHA Co-fractionation 22863883 9606 9606 BIOGRID
TCEA1 PGD Co-fractionation 22863883 9606 9606 BIOGRID
TCEA1 SORD Co-fractionation 22863883 9606 9606 BIOGRID
TCEA1 DUS3L Co-fractionation 26344197 9606 9606 BIOGRID
TCEA1 NFATC2IP Co-fractionation 26344197 9606 9606 BIOGRID
TCEA1 ZMAT2 Co-fractionation 26344197 9606 9606 BIOGRID
 Annotation of TCEA1
 TCGA cancer survival map of TCEA1


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  TCEA1