TcoF overview
TcoF: TRIM29
GeneID: 7295
Name: Tripartite motif-containing protein 29
Ensembl: ENSG00000137699
Species: Human
Class: class 2
Family: Tripartite motif
Disease: 1
Go term: 11
Pathway: 2
Hallmark: --
Super Enhancer:

chr11:120039378-120113044 chr11:119950391-119964365 chr11:120038923-120120324 chr11:119989788-120010732 chr11:119991462-120009817 chr11:119991394-120009909 chr11:119991277-120009723 chr11:119978976-120019194 chr11:119991321-120019600 chr11:119990566-119996541 chr11:119991809-120009516 chr11:119987243-120010344 chr11:119990123-120010736 chr11:119981162-120008700 chr11:119990987-120020356 chr11:119979047-120025185 chr11:119990988-120003181 chr11:119991310-120006100 chr11:119992342-120005378 chr11:119982711-120004724 chr11:119991578-120006777 chr11:119991589-120010605 chr11:119979203-120018835 chr11:119979171-120014307 chr11:119989712-120014521 chr11:119992293-120006523 chr11:119989794-120019385 chr11:119990191-120009089 chr11:119990394-120009631 chr11:119991029-120009205 chr11:119972717-120019270 chr11:119991118-120000351 chr11:119991541-120009802 chr11:119991565-120009689 chr11:119991071-120008896 chr11:119847819-119892809 chr11:119845760-119903794 chr11:119845783-119896660 chr11:119844537-119862061

--
Enhancer:

chr11:120068950-120070730 chr11:120082220-120084380 chr11:120085880-120088010 chr11:120196080-120197830 chr11:119991370-119993660 chr11:120176500-120178180 chr11:120066320-120068820 chr11:120207980-120209120 chr11:119989030-119991280 chr11:119998280-119999100 chr11:120096500-120097520 chr11:120186140-120187930 chr11:120188070-120189060 chr11:120295120-120296310 chr11:120169100-120170330 chr11:120248310-120249440 chr11:120124880-120125530 chr11:120336070-120337900 chr11:120141940-120143520 chr11:120214020-120216400 chr11:120302620-120304530 chr11:120340790-120342740 chr11:120397220-120398880 chr11:120402710-120404120 chr11:120094190-120096360 chr11:120084610-120084930 chr11:120085050-120085720 chr11:119715350-119717110 chr11:119994540-119996390 chr11:119999200-120001270 chr11:120017400-120019300 chr11:119485800-119487880 chr11:119608140-119610240 chr11:119736250-119736870 chr11:120048950-120050630 chr11:120150110-120150780 chr11:120151050-120152820 chr11:120161610-120162270 chr11:120164540-120167000 chr11:120175920-120176350 chr11:120180300-120182740 chr11:120198350-120200680 chr11:120216660-120219090 chr11:120223290-120223810 chr11:120260810-120261420 chr11:120261430-120263830 chr11:120299870-120300140 chr11:120352660-120353320 chr11:120395290-120397170 chr11:120483220-120484980 chr11:120580500-120582650 chr11:119734030-119735800 chr11:119443080-119443950 chr11:119713490-119714280 chr11:119714330-119714560 chr11:119728270-119730610 chr11:119730760-119731860 chr11:119731910-119732360 chr11:119987520-119988470 chr11:120129340-120131370 chr11:120283260-120285330 chr11:119454720-119456590 chr11:120618200-120619390 chr11:120125680-120126720 chr11:120425460-120427120 chr11:120479620-120480150

--
Promoter:

chr11:119981994-120056237

False
 ChIP-seq based regulatory details of TRIM29
select * from encode where Experiment_target='TRIM29'
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
 Downstream target genes of TRIM29
 Protein-protein interaction of TRIM29
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
TRIM29 CRACR2A Two-hybrid 16189514 9606 9606 BIOGRID
TRIM29 TSGA10 Two-hybrid 16189514 9606 9606 BIOGRID
TRIM29 LZTS2 Two-hybrid 16189514 9606 9606 BIOGRID
TRIM29 GCC1 Two-hybrid 16189514 9606 9606 BIOGRID
TRIM29 CEP70 Two-hybrid 16189514 9606 9606 BIOGRID
TRIM29 MYO15B Two-hybrid 16189514 9606 9606 BIOGRID
TRIM29 FBF1 Two-hybrid 16189514 9606 9606 BIOGRID
TRIM29 TRIM29 Two-hybrid 16189514 9606 9606 BIOGRID
TRIM29 GCC1 Affinity Capture-Western 16189514 9606 9606 BIOGRID
TRIM29 TRIM29 Two-hybrid 11331580 9606 9606 BIOGRID
TRIM29 TRIM23 Two-hybrid 11331580 9606 9606 BIOGRID
TRIM29 MID2 Two-hybrid 11331580 9606 9606 BIOGRID
TRIM29 TRIM11 Two-hybrid 11331580 9606 9606 BIOGRID
TRIM29 TRIM27 Two-hybrid 11331580 9606 9606 BIOGRID
TRIM29 TAX1BP3 Two-hybrid 20211142 9606 9606 BIOGRID
TRIM29 FBXL19 Two-hybrid 20211142 9606 9606 BIOGRID
TRIM29 KAT5 Two-hybrid 21463657 9606 9606 BIOGRID
TRIM29 CARD9 Two-hybrid 25416956 9606 9606 BIOGRID
TRIM29 CEP70 Two-hybrid 25416956 9606 9606 BIOGRID
TRIM29 LZTS2 Two-hybrid 25416956 9606 9606 BIOGRID
TRIM29 GOLGA2 Two-hybrid 21516116 9606 9606 BIOGRID
TRIM29 CAD Affinity Capture-MS 26496610 9606 9606 BIOGRID
TRIM29 CLTA Affinity Capture-MS 26496610 9606 9606 BIOGRID
TRIM29 DCTN1 Affinity Capture-MS 26496610 9606 9606 BIOGRID
TRIM29 TRIM27 Affinity Capture-MS 26496610 9606 9606 BIOGRID
TRIM29 SEC16A Affinity Capture-MS 26496610 9606 9606 BIOGRID
TRIM29 SYNE1 Affinity Capture-MS 26496610 9606 9606 BIOGRID
TRIM29 SACS Affinity Capture-MS 26496610 9606 9606 BIOGRID
TRIM29 PKN3 Affinity Capture-MS 26496610 9606 9606 BIOGRID
TRIM29 CHCHD3 Affinity Capture-MS 26496610 9606 9606 BIOGRID
TRIM29 ACTL8 Affinity Capture-MS 26496610 9606 9606 BIOGRID
TRIM29 KLHL13 Affinity Capture-MS 26496610 9606 9606 BIOGRID
TRIM29 TUBB Affinity Capture-MS 26496610 9606 9606 BIOGRID
TRIM29 HIST1H1C Affinity Capture-MS 26381412 9606 9606 BIOGRID
TRIM29 HIST1H2BC Affinity Capture-MS 26381412 9606 9606 BIOGRID
TRIM29 HSPA1A Affinity Capture-MS 26381412 9606 9606 BIOGRID
TRIM29 HIST1H4F Affinity Capture-MS 26381412 9606 9606 BIOGRID
TRIM29 YBX3 Affinity Capture-MS 26381412 9606 9606 BIOGRID
TRIM29 HIST1H2AM Affinity Capture-MS 26381412 9606 9606 BIOGRID
TRIM29 PHB2 Affinity Capture-MS 26381412 9606 9606 BIOGRID
TRIM29 RNF8 Affinity Capture-MS 26381412 9606 9606 BIOGRID
TRIM29 VIM Affinity Capture-MS 26381412 9606 9606 BIOGRID
TRIM29 RPL13 Affinity Capture-MS 26381412 9606 9606 BIOGRID
TRIM29 RPS19 Affinity Capture-MS 26381412 9606 9606 BIOGRID
TRIM29 BASP1 Affinity Capture-MS 26381412 9606 9606 BIOGRID
TRIM29 HSPA5 Affinity Capture-MS 26381412 9606 9606 BIOGRID
TRIM29 RPS4X Affinity Capture-MS 26381412 9606 9606 BIOGRID
TRIM29 RPS18 Affinity Capture-MS 26381412 9606 9606 BIOGRID
TRIM29 H1FX Affinity Capture-MS 26381412 9606 9606 BIOGRID
TRIM29 SERBP1 Affinity Capture-MS 26381412 9606 9606 BIOGRID
TRIM29 RPS10 Affinity Capture-MS 26381412 9606 9606 BIOGRID
TRIM29 C1QBP Affinity Capture-MS 26381412 9606 9606 BIOGRID
TRIM29 HMGA1 Affinity Capture-MS 26381412 9606 9606 BIOGRID
TRIM29 MARCKS Affinity Capture-MS 26381412 9606 9606 BIOGRID
TRIM29 HNRNPU Affinity Capture-MS 26381412 9606 9606 BIOGRID
TRIM29 RPL26 Affinity Capture-MS 26381412 9606 9606 BIOGRID
TRIM29 EEF1A1 Affinity Capture-MS 26381412 9606 9606 BIOGRID
TRIM29 PARP1 Affinity Capture-MS 26381412 9606 9606 BIOGRID
TRIM29 RUVBL2 Affinity Capture-MS 26381412 9606 9606 BIOGRID
TRIM29 RNF8 Affinity Capture-Western 26381412 9606 9606 BIOGRID
TRIM29 DVL2 Affinity Capture-Western 24469230 9606 9606 BIOGRID
TRIM29 IKBKG Affinity Capture-Western 27695001 9606 9606 BIOGRID
TRIM29 IKBKG Biochemical Activity 27695001 9606 9606 BIOGRID
TRIM29 CDC34 Reconstituted Complex 27695001 9606 9606 BIOGRID
TRIM29 UBE2E1 Reconstituted Complex 27695001 9606 9606 BIOGRID
TRIM29 UBE2C Reconstituted Complex 27695001 9606 9606 BIOGRID
TRIM29 MDC1 Affinity Capture-MS 26095369 9606 9606 BIOGRID
TRIM29 PRKDC Affinity Capture-MS 26095369 9606 9606 BIOGRID
TRIM29 MRE11A Affinity Capture-MS 26095369 9606 9606 BIOGRID
TRIM29 RAD50 Affinity Capture-MS 26095369 9606 9606 BIOGRID
TRIM29 NBN Affinity Capture-MS 26095369 9606 9606 BIOGRID
TRIM29 BRCA1 Affinity Capture-MS 26095369 9606 9606 BIOGRID
TRIM29 MSH2 Affinity Capture-MS 26095369 9606 9606 BIOGRID
TRIM29 MSH6 Affinity Capture-MS 26095369 9606 9606 BIOGRID
TRIM29 MSH3 Affinity Capture-MS 26095369 9606 9606 BIOGRID
TRIM29 PMS2 Affinity Capture-MS 26095369 9606 9606 BIOGRID
TRIM29 MLH1 Affinity Capture-MS 26095369 9606 9606 BIOGRID
TRIM29 RFC1 Affinity Capture-MS 26095369 9606 9606 BIOGRID
TRIM29 RFC2 Affinity Capture-MS 26095369 9606 9606 BIOGRID
TRIM29 RFC3 Affinity Capture-MS 26095369 9606 9606 BIOGRID
TRIM29 RFC4 Affinity Capture-MS 26095369 9606 9606 BIOGRID
TRIM29 RFC5 Affinity Capture-MS 26095369 9606 9606 BIOGRID
TRIM29 SMC1A Affinity Capture-MS 26095369 9606 9606 BIOGRID
TRIM29 SMC2 Affinity Capture-MS 26095369 9606 9606 BIOGRID
TRIM29 SMC3 Affinity Capture-MS 26095369 9606 9606 BIOGRID
TRIM29 SMC4 Affinity Capture-MS 26095369 9606 9606 BIOGRID
TRIM29 BRCA2 Affinity Capture-MS 26095369 9606 9606 BIOGRID
TRIM29 EP400 Affinity Capture-MS 26095369 9606 9606 BIOGRID
TRIM29 DMAP1 Affinity Capture-MS 26095369 9606 9606 BIOGRID
TRIM29 RUVBL1 Affinity Capture-MS 26095369 9606 9606 BIOGRID
TRIM29 RUVBL2 Affinity Capture-MS 26095369 9606 9606 BIOGRID
TRIM29 ACTL6A Affinity Capture-MS 26095369 9606 9606 BIOGRID
TRIM29 ATM Affinity Capture-Western 26095369 9606 9606 BIOGRID
TRIM29 BRCA1 Affinity Capture-Western 26095369 9606 9606 BIOGRID
TRIM29 MSH2 Affinity Capture-Western 26095369 9606 9606 BIOGRID
TRIM29 MSH6 Affinity Capture-Western 26095369 9606 9606 BIOGRID
TRIM29 MLH1 Affinity Capture-Western 26095369 9606 9606 BIOGRID
TRIM29 SMC1A Affinity Capture-Western 26095369 9606 9606 BIOGRID
TRIM29 SMC3 Affinity Capture-Western 26095369 9606 9606 BIOGRID
TRIM29 SMC4 Affinity Capture-Western 26095369 9606 9606 BIOGRID
TRIM29 PRKDC Affinity Capture-Western 26095369 9606 9606 BIOGRID
TRIM29 MSH2 Reconstituted Complex 26095369 9606 9606 BIOGRID
TRIM29 ATM Reconstituted Complex 26095369 9606 9606 BIOGRID
TRIM29 HIST1H3A Reconstituted Complex 26095369 9606 9606 BIOGRID
TRIM29 HIST1H4A Reconstituted Complex 26095369 9606 9606 BIOGRID
TRIM29 HIST1H3A Affinity Capture-Western 26095369 9606 9606 BIOGRID
TRIM29 TRIM29 Two-hybrid 32296183 9606 9606 BIOGRID
TRIM29 DISC1 Two-hybrid 32296183 9606 9606 BIOGRID
TRIM29 NFKBID Two-hybrid 32296183 9606 9606 BIOGRID
TRIM29 CCDC57 Two-hybrid 32296183 9606 9606 BIOGRID
TRIM29 KRT35 Two-hybrid 32296183 9606 9606 BIOGRID
TRIM29 ACTN3 Two-hybrid 32296183 9606 9606 BIOGRID
TRIM29 TAB2 Affinity Capture-Western 31270148 9606 9606 BIOGRID
TRIM29 MAP3K7 Affinity Capture-MS 31270148 9606 9606 BIOGRID
TRIM29 TAB1 Affinity Capture-MS 31270148 9606 9606 BIOGRID
TRIM29 TAB2 Affinity Capture-MS 31270148 9606 9606 BIOGRID
TRIM29 TRAF6 Affinity Capture-MS 31270148 9606 9606 BIOGRID
TRIM29 H1f0 Affinity Capture-MS 26381412 9606 10090 BIOGRID
 Annotation of TRIM29
 TCGA cancer survival map of TRIM29


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  TRIM29