TcoF overview
TcoF: TRIM5
GeneID: 9205
Name: Tripartite motif-containing protein 5
Ensembl: ENSG00000132256
Species: Human
Class: class 1
Family: Tripartite motif
Disease: 2
Go term: 32
Pathway: 1
Hallmark: --
Super Enhancer:

--
Enhancer:

chr11:5624970-5625760 chr11:5943670-5945650 chr11:5703360-5705820 chr11:5618140-5619580 chr11:5626800-5628140 chr11:6338290-6340170 chr11:6252930-6255320 chr11:6308770-6311140 chr11:5937960-5938900 chr11:5777810-5778300

Promoter:

chr11:5684425-5959849

 ChIP-seq based regulatory details of TRIM5
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
 Downstream target genes of TRIM5
 Protein-protein interaction of TRIM5
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
TRIM5 TRIM5 Two-hybrid 11331580 9606 9606 BIOGRID
TRIM5 TRIM5 Biochemical Activity 18312418 9606 9606 BIOGRID
TRIM5 TRIM5 Affinity Capture-Western 21734049 9606 9606 BIOGRID
TRIM5 UBB Two-hybrid 22078707 9606 9606 BIOGRID
TRIM5 PSMC2 Two-hybrid 22078707 9606 9606 BIOGRID
TRIM5 PSMC2 Affinity Capture-Western 22078707 9606 9606 BIOGRID
TRIM5 PSMD7 Affinity Capture-Western 22078707 9606 9606 BIOGRID
TRIM5 PSMC4 Affinity Capture-Western 22078707 9606 9606 BIOGRID
TRIM5 PSMC5 Affinity Capture-Western 22078707 9606 9606 BIOGRID
TRIM5 MAP3K11 Affinity Capture-Western 22078707 9606 9606 BIOGRID
TRIM5 PSMC2 FRET 22078707 9606 9606 BIOGRID
TRIM5 TRIM5 Co-purification 18799573 9606 9606 BIOGRID
TRIM5 TRIM5 Two-hybrid 16828831 9606 9606 BIOGRID
TRIM5 TRIM5 Reconstituted Complex 18799578 9606 9606 BIOGRID
TRIM5 TRIM5 Reconstituted Complex 17156811 9606 9606 BIOGRID
TRIM5 TRIM5 Reconstituted Complex 16254380 9606 9606 BIOGRID
TRIM5 TRIM5 Affinity Capture-Western 17543365 9606 9606 BIOGRID
TRIM5 TRIM5 Affinity Capture-Western 16808955 9606 9606 BIOGRID
TRIM5 SQSTM1 Affinity Capture-Western 20357094 9606 9606 BIOGRID
TRIM5 IKBKG Affinity Capture-Western 21512573 9606 9606 BIOGRID
TRIM5 MAP3K1 Affinity Capture-Western 21512573 9606 9606 BIOGRID
TRIM5 MAP3K7 Affinity Capture-Western 21512573 9606 9606 BIOGRID
TRIM5 TAB2 Affinity Capture-Western 21512573 9606 9606 BIOGRID
TRIM5 TAB3 Affinity Capture-Western 21512573 9606 9606 BIOGRID
TRIM5 UBC Biochemical Activity 21512573 9606 9606 BIOGRID
TRIM5 UBE2D2 Reconstituted Complex 18312418 9606 9606 BIOGRID
TRIM5 TRIM5 Two-hybrid 22493164 9606 9606 BIOGRID
TRIM5 TRIM32 Two-hybrid 22493164 9606 9606 BIOGRID
TRIM5 MKRN3 Two-hybrid 22493164 9606 9606 BIOGRID
TRIM5 TRIM5 Biochemical Activity 12878161 9606 9606 BIOGRID
TRIM5 UBE2D2 Reconstituted Complex 12878161 9606 9606 BIOGRID
TRIM5 TRIM5 Biochemical Activity 18799573 9606 9606 BIOGRID
TRIM5 UBE2D3 Reconstituted Complex 18799573 9606 9606 BIOGRID
TRIM5 TRIM5 Biochemical Activity 26212332 9606 9606 BIOGRID
TRIM5 UBE2N Reconstituted Complex 26212332 9606 9606 BIOGRID
TRIM5 UBE2D3 Reconstituted Complex 26212332 9606 9606 BIOGRID
TRIM5 TRIM5 Reconstituted Complex 26212332 9606 9606 BIOGRID
TRIM5 SUMO1 Co-localization 25880753 9606 9606 BIOGRID
TRIM5 CUEDC1 Affinity Capture-MS 28514442 9606 9606 BIOGRID
TRIM5 YARS Affinity Capture-MS 28514442 9606 9606 BIOGRID
TRIM5 CREB1 Affinity Capture-MS 28514442 9606 9606 BIOGRID
TRIM5 LGALS3 Affinity Capture-Western 27693506 9606 9606 BIOGRID
TRIM5 COIL Co-localization 26748714 9606 9606 BIOGRID
TRIM5 SUMO1 Co-localization 26748714 9606 9606 BIOGRID
TRIM5 TRIM5 Reconstituted Complex 30503508 9606 9606 BIOGRID
TRIM5 TRIM5 Biochemical Activity 30503508 9606 9606 BIOGRID
TRIM5 UBE2N Reconstituted Complex 30503508 9606 9606 BIOGRID
TRIM5 UBE2W Reconstituted Complex 30503508 9606 9606 BIOGRID
TRIM5 MPP7 Two-hybrid 32296183 9606 9606 BIOGRID
TRIM5 WDYHV1 Two-hybrid 32296183 9606 9606 BIOGRID
TRIM5 UBASH3A Two-hybrid 32296183 9606 9606 BIOGRID
TRIM5 TSGA10IP Two-hybrid 32296183 9606 9606 BIOGRID
TRIM5 YES1 Two-hybrid 32296183 9606 9606 BIOGRID
TRIM5 MTURN Two-hybrid 32296183 9606 9606 BIOGRID
TRIM5 gag Co-fractionation 16809279 9606 11676 BIOGRID
TRIM5 gag Reconstituted Complex 17543365 9606 11676 BIOGRID
TRIM5 gag Reconstituted Complex 16808955 9606 11676 BIOGRID
TRIM5 UL123 Affinity Capture-Western 25412268 9606 10359 BIOGRID
TRIM5 gag Co-crystal Structure 31807695 9606 11676 BIOGRID
 Annotation of TRIM5
 TCGA cancer survival map of TRIM5


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  TRIM5