TcoF overview
TcoF: UBB
GeneID: 27005
Name: Polyubiquitin-B
Ensembl: ENSG00000170315
Species: Human
Class: class 2
Family: Others
Disease: 5
Go term: 79
Pathway: 126
Hallmark: 5
Super Enhancer:

chr17:16282181-16291625 chr17:16266963-16304461 chr17:16280391-16302987 chr17:16280620-16304310 chr17:16276283-16324443 chr17:16254071-16291461

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Enhancer:

chr17:16321180-16323420 chr17:16323560-16325370 chr17:16418730-16420860 chr17:16723260-16724840 chr17:15683170-15684860 chr17:16052830-16054550 chr17:16075310-16076730 chr17:16216930-16219390 chr17:16242830-16244040 chr17:16329580-16330030 chr17:16330860-16331630 chr17:16331700-16332130 chr17:16519320-16521730 chr17:16225920-16226660 chr17:16284990-16285210 chr17:16319150-16320870 chr17:16471240-16472260 chr17:16534960-16537170 chr17:16583640-16584990 chr17:16513280-16515140 chr17:16555280-16557070 chr17:16274720-16276050 chr17:16327750-16329410 chr17:16031930-16034020 chr17:16146150-16148080 chr17:16244180-16245000 chr17:16276310-16277930 chr17:16344610-16344680 chr17:16236060-16236720 chr17:16252000-16253240 chr17:16426910-16428940 chr17:16043980-16046340 chr17:15941800-15942740 chr17:16459320-16461150 chr17:16072720-16075110 chr17:16176820-16177240 chr17:16347450-16348560 chr17:16153630-16155090 chr17:16185400-16187460 chr17:16366630-16368830 chr17:15861530-15863590 chr17:15987760-15989590 chr17:16103410-16104350 chr17:16105680-16107080 chr17:16131830-16134230 chr17:16158100-16159880 chr17:16393270-16395050 chr17:16462880-16464600 chr17:16515950-16517410 chr17:15856920-15858830 chr17:16199980-16202370 chr17:16348650-16350690 chr17:16350940-16351150 chr17:16361880-16364200 chr17:16370490-16371240 chr17:15859130-15861210 chr17:15965580-15967380 chr17:15980360-15982600 chr17:16012880-16015300 chr17:16271990-16274370 chr17:16468790-16469830 chr17:16040730-16041470 chr17:16085140-16086170 chr17:16222850-16223400 chr17:15698640-15700160 chr17:16286060-16288530 chr17:16814160-16815380 chr17:16815530-16816340 chr17:16930630-16933120 chr17:15884460-15886520 chr17:16377650-16379430 chr17:16365320-16365570 chr17:16365700-16366140 chr17:16366260-16366470

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Promoter:

chr17:16284112-16286059

False
 ChIP-seq based regulatory details of UBB
select * from encode where Experiment_target='UBB'
Sample ID Experiment target Biosample type Biosample term name GSM ID Tissue type Source
 Downstream target genes of UBB
 Protein-protein interaction of UBB
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
UBB DAZAP2 Two-hybrid 16189514 9606 9606 BIOGRID
UBB UBE3A Two-hybrid 25416956 9606 9606 BIOGRID
UBB DAZAP2 Two-hybrid 25416956 9606 9606 BIOGRID
UBB CALCOCO2 Two-hybrid 25416956 9606 9606 BIOGRID
UBB UBQLN1 Two-hybrid 25416956 9606 9606 BIOGRID
UBB DAZAP2 Two-hybrid 21516116 9606 9606 BIOGRID
UBB RAD18 Co-crystal Structure 28506460 9606 9606 BIOGRID
UBB UBB Reconstituted Complex 28292943 9606 9606 BIOGRID
UBB DNMT1 Co-crystal Structure 29471350 9606 9606 BIOGRID
UBB DNMT1 Reconstituted Complex 29471350 9606 9606 BIOGRID
UBB UIMC1 Reconstituted Complex 24039796 9606 9606 BIOGRID
UBB UBE2D2 Reconstituted Complex 30523153 9606 9606 BIOGRID
UBB MTURN Two-hybrid 32296183 9606 9606 BIOGRID
UBB DAZAP2 Two-hybrid 32296183 9606 9606 BIOGRID
UBB UBQLN2 Two-hybrid 32296183 9606 9606 BIOGRID
UBB PRSS3 Affinity Capture-MS 24981860 9606 9606 BIOGRID
UBB BASP1 Affinity Capture-MS 24981860 9606 9606 BIOGRID
UBB QPCT Affinity Capture-MS 24981860 9606 9606 BIOGRID
UBB NEDD4 Affinity Capture-MS 24981860 9606 9606 BIOGRID
UBB KDM5C Affinity Capture-MS 24981860 9606 9606 BIOGRID
UBB SRSF1 Affinity Capture-MS 24981860 9606 9606 BIOGRID
UBB UBE2A Affinity Capture-MS 24981860 9606 9606 BIOGRID
UBB SUMO2 Affinity Capture-MS 24981860 9606 9606 BIOGRID
UBB PFN1 Affinity Capture-MS 24981860 9606 9606 BIOGRID
UBB DDI1 Co-crystal Structure 25703377 9606 559292 BIOGRID
UBB DDI1 Reconstituted Complex 25703377 9606 559292 BIOGRID
 Annotation of UBB
 TCGA cancer survival map of UBB


Calculate the hazards ratio based on Cox PH Model.
Add the 95% CI as dotted line.
Reset Add The plot axis-x order will follow the list.


Calculate the hazards ratio based on Cox PH Model.
We use log2(TPM + 1) for log-scale.
All Add
Reset The plot is based on the datasets of list.


 Disease information of  UBB