TcoF overview
| TcoF: | XRN2 | |
| GeneID: | 10771 | |
| Name: | 5'-3' exoribonuclease 2 | |
| Ensembl: | ENSG00000088930 | |
| Species: | Human | |
| Class: | class 2 | |
| Family: | Others | |
| Disease: | 0 | |
| Go term: | 24 | |
| Pathway: | 2 | |
| Hallmark: | -- | |
| Super Enhancer: |
chr20:21200706-21217101 chr20:21201302-21217118 |
|
| Enhancer: |
chr20:21284110-21286510 chr20:21124930-21126200 chr20:21324850-21326070 chr20:21208530-21209640 chr20:20887210-20888450 chr20:21048320-21049190 chr20:21194660-21195170 chr20:21195340-21196220 chr20:21204750-21206120 chr20:21319720-21321350 chr20:21337300-21338370 chr20:21155570-21156860 chr20:21160010-21160390 chr20:21295050-21296670 chr20:21415920-21418230 chr20:21476930-21477610 chr20:21493120-21494040 chr20:21070460-21071130 chr20:21163240-21164880 chr20:21183010-21184170 chr20:21360070-21361960 chr20:21271670-21272580 chr20:21352300-21353070 chr20:21143150-21143490 chr20:21550890-21553140 chr20:21342660-21343330 chr20:21483510-21484970 chr20:21489340-21491650 chr20:21033160-21034790 chr20:21338430-21338710 chr20:21136570-21137660 chr20:21209750-21210310 chr20:21332590-21334700 chr20:21293600-21294090 |
|
| Promoter: |
chr20:21283969-21370463 |
ChIP-seq based regulatory details of XRN2
| Sample ID | Experiment target | Biosample type | Biosample term name | GSM ID | Tissue type | Source |
|---|---|---|---|---|---|---|
| TcoF_00_20422 | XRN2 | cell line | HEK293 | GSM1872294 | Embryonic Kidney | Cistrome |
| TcoF_00_20423 | XRN2 | cell line | HEK293 | GSM1872295 | Embryonic Kidney | Cistrome |
| TcoF_00_20424 | XRN2 | cell line | HEK293 | GSM1872296 | Embryonic Kidney | Cistrome |
| TcoF_00_20425 | XRN2 | cell line | HEK293 | GSM1872297 | Embryonic Kidney | Cistrome |
| TcoF_00_20426 | XRN2 | cell line | HEK293 | GSM1872298 | Embryonic Kidney | Cistrome |
| TcoF_00_20427 | XRN2 | cell line | HEK293 | GSM1872299 | Embryonic Kidney | Cistrome |
| TcoF_00_20428 | XRN2 | cell line | HEK293 | GSM1872300 | Embryonic Kidney | Cistrome |
| TcoF_00_20501 | XRN2 | cell line | HeLa | GSM891235 | Uterus | Cistrome |
| TcoF_00_20418 | XRN2 | cell line | HEK293 | GSM891240 | Embryonic Kidney | Cistrome |
| TcoF_00_20417 | XRN2 | cell line | HEK293 | GSM891241 | Embryonic Kidney | Cistrome |
Downstream target genes of XRN2
Upstream regulatory details of XRN2
Protein-protein interaction of XRN2
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| XRN2 | TOLLIP | Two-hybrid | 15231747 | 9606 | 9606 | BIOGRID |
| XRN2 | EIF3L | Two-hybrid | 15231747 | 9606 | 9606 | BIOGRID |
| XRN2 | EEF1A1 | Two-hybrid | 15231747 | 9606 | 9606 | BIOGRID |
| XRN2 | ATRN | Two-hybrid | 15231747 | 9606 | 9606 | BIOGRID |
| XRN2 | CTSC | Two-hybrid | 15231747 | 9606 | 9606 | BIOGRID |
| XRN2 | EIF6 | Two-hybrid | 15231747 | 9606 | 9606 | BIOGRID |
| XRN2 | EIF5A | Two-hybrid | 15231747 | 9606 | 9606 | BIOGRID |
| XRN2 | TIPARP | Two-hybrid | 15231747 | 9606 | 9606 | BIOGRID |
| XRN2 | COMT | Two-hybrid | 15231747 | 9606 | 9606 | BIOGRID |
| XRN2 | MOCS3 | Two-hybrid | 15231747 | 9606 | 9606 | BIOGRID |
| XRN2 | ALDH1B1 | Two-hybrid | 15231747 | 9606 | 9606 | BIOGRID |
| XRN2 | PRAME | Two-hybrid | 15231747 | 9606 | 9606 | BIOGRID |
| XRN2 | MRPS10 | Two-hybrid | 15231747 | 9606 | 9606 | BIOGRID |
| XRN2 | MRPL4 | Two-hybrid | 15231747 | 9606 | 9606 | BIOGRID |
| XRN2 | DXO | Two-hybrid | 15231747 | 9606 | 9606 | BIOGRID |
| XRN2 | EXOSC8 | Two-hybrid | 15231747 | 9606 | 9606 | BIOGRID |
| XRN2 | EXOSC10 | Two-hybrid | 15231747 | 9606 | 9606 | BIOGRID |
| XRN2 | PSMA3 | Two-hybrid | 15231747 | 9606 | 9606 | BIOGRID |
| XRN2 | TARDBP | Two-hybrid | 15231747 | 9606 | 9606 | BIOGRID |
| XRN2 | CDKN2AIPNL | Affinity Capture-MS | 24778252 | 9606 | 9606 | BIOGRID |
| XRN2 | KPNA6 | Affinity Capture-MS | 24778252 | 9606 | 9606 | BIOGRID |
| XRN2 | DHX8 | Affinity Capture-MS | 24778252 | 9606 | 9606 | BIOGRID |
| XRN2 | POLR2A | Affinity Capture-MS | 24778252 | 9606 | 9606 | BIOGRID |
| XRN2 | KPNA1 | Affinity Capture-MS | 24778252 | 9606 | 9606 | BIOGRID |
| XRN2 | NKRF | Affinity Capture-MS | 24778252 | 9606 | 9606 | BIOGRID |
| XRN2 | CDKN2AIP | Affinity Capture-MS | 24778252 | 9606 | 9606 | BIOGRID |
| XRN2 | POLR2B | Affinity Capture-MS | 24778252 | 9606 | 9606 | BIOGRID |
| XRN2 | CFAP58 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| XRN2 | MCFD2 | Co-fractionation | 26344197 | 9606 | 9606 | BIOGRID |
| XRN2 | DYNLT1 | Two-hybrid | 30217970 | 9606 | 9606 | BIOGRID |
| XRN2 | XRN2 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| XRN2 | TTC23 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| XRN2 | CRY2 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| XRN2 | LCN2 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| XRN2 | PLEKHF2 | Two-hybrid | 32296183 | 9606 | 9606 | BIOGRID |
| XRN2 | C5orf42 | Proximity Label-MS | 30021884 | 9606 | 9606 | BIOGRID |
| XRN2 | CCAR2 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | CDKN2AIP | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | CDKN2AIPNL | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | CLP1 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | CPSF6 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | DAP3 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | DHX15 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | HNRNPA2B1 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | HNRNPA3 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | HNRNPAB | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | HNRNPC | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | HNRNPK | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | HNRNPL | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | HNRNPR | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | HNRNPUL1 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | ILF2 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | ILF3 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | LAS1L | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | MRPL4 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | MRPS27 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | MRPS31 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | MRPS34 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | MRPS35 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | MRPS7 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | MRPS9 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | NKRF | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | NOL11 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | NOL9 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | PCF11 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | PCID2 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | PDCD11 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | PTBP3 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | PTCD3 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | RALY | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | RAVER1 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | RBM20 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | RBM6 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | RBMX | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | SRSF9 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | STRBP | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | SYNCRIP | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | TEX10 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | TRA2B | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | UBR5 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | UTP15 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | CIRH1A | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | WDR33 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | WDR43 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | WDR75 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | YLPM1 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | ZC3H4 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | ZFR | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | AQR | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | CEBPZ | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | EIF2AK2 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | MRPS10 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | MRPS22 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | MRPS23 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | MRPS24 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | MRPS26 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | PPHLN1 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | RBM33 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | SRSF1 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | TBL3 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | UTP18 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | MOV10 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | RRS1 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | MRPL1 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | MRPL15 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | MRPL22 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | MRPL38 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | MRPL39 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | MRPL47 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | MRPL50 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | MRPS14 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | MRPS18B | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | NOC4L | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | PSPC1 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | RBM12 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | WDR3 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
| XRN2 | ZNF106 | Proximity Label-MS | 29395067 | 9606 | 9606 | BIOGRID |
Annotation of XRN2
TCGA cancer survival map of XRN2
Expression of XRN2
Disease information of XRN2