Gene Pathway Pathway_source Pathway_id
Ccnt1 Recruitment of elongation factors to form elongation complex IEA R-MMU-112379
Ccnt1 Hyperphosphorylation (Ser2) of RNA Pol II CTD by P-TEFb complex IEA R-MMU-112381
Ccnt1 Addition of nucleotides leads to transcript elongation IEA R-MMU-112385
Ccnt1 Resumption of elongation after recovery from pausing IEA R-MMU-112392
Ccnt1 Abortive termination of elongation after arrest IEA R-MMU-112395
Ccnt1 Separation of elongating transcript from template IEA R-MMU-112396
Ccnt1 Formation of P-TEFb complex IEA R-MMU-112430
Ccnt1 2-4 nt.backtracking of Pol II complex on the template leading to elongation pausing IEA R-MMU-113411
Ccnt1 Pol II elongation complex moves on the template as transcript elongates IEA R-MMU-113412
Ccnt1 TFIIS-mediated recovery of elongation from arrest IEA R-MMU-113413
Ccnt1 7-14 nt. Backtracking of Pol II complex on the template leading to elongation arrest IEA R-MMU-113414
Ccnt1 Elongating transcript encounters a lesion in the template IEA R-MMU-113429
Ccnt1 Phosphorylation of SMAD2 and SMAD3 linker regions by CDK8 or CDK9 IEA R-MMU-2176475
Ccnt1 CDK12 phosphorylates RNA Pol II CTD at DNA repair genes IEA R-MMU-6797606
Ccnt1 CCNK:CDK12 binds RNA Pol II at DNA repair genes IEA R-MMU-6797616
Ccnt1 CDK7 phosphorylates serine-5 and serine-7 of heptad repeats in C-terminal domain of RNA polymerase II at snRNA promoter IEA R-MMU-6810233
Ccnt1 General transcription factors bind SNAPc:POU2F1:ZNF143:snRNA gene IEA R-MMU-6810234
Ccnt1 RPAP2 binds RNA polymerase II phosphorylated at serine-7 residues of heptad repeats in the C-terminal domain IEA R-MMU-6810235
Ccnt1 RNA polymerase II binds initiation factors at promoter of snRNA gene (U1, U2, U4, U4atac, U5, U11, U12) IEA R-MMU-6810238
Ccnt1 Pre-snRNA transcript initiation, Integrator binding, LEC binding IEA R-MMU-6814549
Ccnt1 Integrator complex processes the 3' end of snRNA IEA R-MMU-6814555
Ccnt1 Pre-snRNA is elongated and capped with 7-methylguanosine IEA R-MMU-6814559
Ccnt1 CBCAP complex binds 7-methylguanosine cap of snRNA IEA R-MMU-6814885
Ccnt1 ESR1:ESTG:P-TEFb recruited to paused RNA polymerase II on MYB gene IEA R-MMU-9012315
Ccnt1 p-TEFb phosphorylates serine 2 in RNA polymerase II CTD IEA R-MMU-9012319