Gene Pathway Pathway_source Pathway_id
Cdk9 Recruitment of elongation factors to form elongation complex IEA R-MMU-112379
Cdk9 Hyperphosphorylation (Ser2) of RNA Pol II CTD by P-TEFb complex IEA R-MMU-112381
Cdk9 Addition of nucleotides leads to transcript elongation IEA R-MMU-112385
Cdk9 Resumption of elongation after recovery from pausing IEA R-MMU-112392
Cdk9 Abortive termination of elongation after arrest IEA R-MMU-112395
Cdk9 Separation of elongating transcript from template IEA R-MMU-112396
Cdk9 Formation of P-TEFb complex IEA R-MMU-112430
Cdk9 2-4 nt.backtracking of Pol II complex on the template leading to elongation pausing IEA R-MMU-113411
Cdk9 Pol II elongation complex moves on the template as transcript elongates IEA R-MMU-113412
Cdk9 TFIIS-mediated recovery of elongation from arrest IEA R-MMU-113413
Cdk9 7-14 nt. Backtracking of Pol II complex on the template leading to elongation arrest IEA R-MMU-113414
Cdk9 Elongating transcript encounters a lesion in the template IEA R-MMU-113429
Cdk9 Phosphorylation of SMAD2 and SMAD3 linker regions by CDK8 or CDK9 IEA R-MMU-2176475
Cdk9 CDK12 phosphorylates RNA Pol II CTD at DNA repair genes IEA R-MMU-6797606
Cdk9 CCNK:CDK12 binds RNA Pol II at DNA repair genes IEA R-MMU-6797616
Cdk9 CDK7 phosphorylates serine-5 and serine-7 of heptad repeats in C-terminal domain of RNA polymerase II at snRNA promoter IEA R-MMU-6810233
Cdk9 General transcription factors bind SNAPc:POU2F1:ZNF143:snRNA gene IEA R-MMU-6810234
Cdk9 RPAP2 binds RNA polymerase II phosphorylated at serine-7 residues of heptad repeats in the C-terminal domain IEA R-MMU-6810235
Cdk9 RNA polymerase II binds initiation factors at promoter of snRNA gene (U1, U2, U4, U4atac, U5, U11, U12) IEA R-MMU-6810238
Cdk9 Pre-snRNA transcript initiation, Integrator binding, LEC binding IEA R-MMU-6814549
Cdk9 Integrator complex processes the 3' end of snRNA IEA R-MMU-6814555
Cdk9 Pre-snRNA is elongated and capped with 7-methylguanosine IEA R-MMU-6814559
Cdk9 CBCAP complex binds 7-methylguanosine cap of snRNA IEA R-MMU-6814885
Cdk9 ESR1:ESTG:P-TEFb recruited to paused RNA polymerase II on MYB gene IEA R-MMU-9012315
Cdk9 p-TEFb phosphorylates serine 2 in RNA polymerase II CTD IEA R-MMU-9012319