Gene Pathway Pathway_source Pathway_id
Mnat1 Formation of the closed pre-initiation complex IEA R-MMU-109639
Mnat1 Addition of nucleotides between position +11 and +30 IEA R-MMU-111264
Mnat1 Recruitment of elongation factors to form elongation complex IEA R-MMU-112379
Mnat1 Hypophosphorylation of RNA Pol II CTD by FCP1P protein IEA R-MMU-112383
Mnat1 Addition of nucleotides leads to transcript elongation IEA R-MMU-112385
Mnat1 Extrusion of 5'-end of 30 nt long transcript through the pore in Pol II complex IEA R-MMU-113430
Mnat1 CAK-mediated phosphorylation of Cyclin B1:Cdc2 complexes IEA R-MMU-170076
Mnat1 CAK-mediated phosphorylation of Cyclin A:Cdc2 complexes IEA R-MMU-170087
Mnat1 CAK-mediated phosphorylation of Cyclin A:Cdk2 IEA R-MMU-187949
Mnat1 CAK-mediated phosphorylation of Cyclin E:Cdk2 IEA R-MMU-188350
Mnat1 Recruitment of XPA and release of CAK IEA R-MMU-5689861
Mnat1 TFIIH binds GG-NER site to form a verification complex IEA R-MMU-5691000
Mnat1 RNA Pol II initiates transcription from damaged DNA template IEA R-MMU-6781818
Mnat1 Active RNA Pol II complex transcribes lesion-containing DNA template IEA R-MMU-6781824
Mnat1 ERCC8 (CSA) binds stalled RNA Pol II IEA R-MMU-6781833
Mnat1 ERCC6 binds stalled RNA Pol II IEA R-MMU-6781840
Mnat1 ERCC8:DDB1:CUL4:RBX1 ubiquitinates ERCC6 and RNA Pol II IEA R-MMU-6781867
Mnat1 Assembly of the pre-incision complex in TC-NER IEA R-MMU-6782004
Mnat1 UVSSA:USP7 deubiquitinates ERCC6 IEA R-MMU-6782069
Mnat1 ERCC2-facilitated RNA Pol II backtracking in TC-NER IEA R-MMU-6782131
Mnat1 ERCC5 and RPA bind TC-NER site IEA R-MMU-6782138
Mnat1 Binding of ERCC1:ERCC4 (ERCC1:XPF) to pre-incision complex in TC-NER IEA R-MMU-6782141
Mnat1 5' incision of damaged DNA strand by ERCC1:ERCC4 in TC-NER IEA R-MMU-6782204
Mnat1 Repair DNA synthesis of ~27-30 bases long patch by POLD, POLE or POLK in TC-NER IEA R-MMU-6782208
Mnat1 DNA polymerases delta, epsilon or kappa bind the TC-NER site IEA R-MMU-6782211
Mnat1 3' incision by ERCC5 (XPG) in TC-NER IEA R-MMU-6782224
Mnat1 Ligation of newly synthesized repair patch to incised DNA in TC-NER IEA R-MMU-6782227
Mnat1 CDK12 phosphorylates RNA Pol II CTD at DNA repair genes IEA R-MMU-6797606
Mnat1 CCNK:CDK12 binds RNA Pol II at DNA repair genes IEA R-MMU-6797616
Mnat1 Recruitment of Active RNA Polymerase I to SL1:phos.UBF-1:rDNA Promoter IEA R-MMU-73758
Mnat1 Loss of Rrn3 from RNA Polymerase I promoter escape complex IEA R-MMU-73769
Mnat1 Abortive initiation after formation of the first phosphodiester bond IEA R-MMU-73946
Mnat1 Elongation of pre-rRNA transcript IEA R-MMU-74986
Mnat1 PTRF Binds the Polymerase I Transcription Complex/Nascent Pre rRNA Complex paused at the TTF-I:Sal Box IEA R-MMU-74993
Mnat1 Addition of the third nucleotide on the nascent transcript IEA R-MMU-75850
Mnat1 Abortive Initiation Before Second Transition IEA R-MMU-75856
Mnat1 NTP Binds Active Site of RNA Polymerase II IEA R-MMU-75861
Mnat1 Fall Back to Closed Pre-initiation Complex IEA R-MMU-75862
Mnat1 Newly Formed Phosphodiester Bond Stabilized and PPi Released IEA R-MMU-75864
Mnat1 Nucleophillic Attack by 3'-hydroxyl Oxygen of nascent transcript on the Alpha Phosphate of NTP IEA R-MMU-75866
Mnat1 Addition of the fourth nucleotide on the Nascent Transcript: Second Transition IEA R-MMU-75869
Mnat1 Addition of Nucleotides 5 through 9 on the growing Transcript IEA R-MMU-75873
Mnat1 Abortive Initiation After Second Transition IEA R-MMU-75891
Mnat1 RNA Polymerase II Promoter Opening: First Transition IEA R-MMU-75949
Mnat1 Addition of nucleotides 10 and 11 on the growing transcript: Third Transition IEA R-MMU-76576
Mnat1 Activation of GT IEA R-MMU-77068
Mnat1 RNA Polymerase II CTD (phosphorylated) binds to CE IEA R-MMU-77069
Mnat1 Phosphorylation (Ser5) of RNA pol II CTD IEA R-MMU-77071
Mnat1 SPT5 subunit of Pol II binds the RNA triphosphatase (RTP) IEA R-MMU-77073
Mnat1 Capping complex formation IEA R-MMU-77077
Mnat1 Hydrolysis of the 5'-end of the nascent transcript by the capping enzyme IEA R-MMU-77078
Mnat1 Formation of the CE:GMP intermediate complex IEA R-MMU-77081
Mnat1 Transfer of GMP from the capping enzyme GT site to 5'-end of mRNA IEA R-MMU-77083
Mnat1 Dissociation of transcript with 5'-GMP from GT IEA R-MMU-77085
Mnat1 Methylation of GMP-cap by RNA Methyltransferase IEA R-MMU-77090
Mnat1 CDK4/6:CCND complexes are activated by T-loop phosphorylation of CDK4/6 IEA R-MMU-8942836
Mnat1 RUNX1 binds the core TAL1 complex IEA R-MMU-8956568
Mnat1 Unwinding of DNA for the Nascent Transcript: Second Transition IEA R-MMU-9613494
Mnat1 Unwinding DNA for the nascent transcript IEA R-MMU-9613497
Mnat1 ERCC3-facilitated RNA Pol II backtracking in TC-NER IEA R-MMU-9684118