TcoF overview
| TcoF: | Atrx | |
| GeneID: | 22589 | |
| Name: | Transcriptional regulator ATRX | |
| Ensembl: | ENSMUSG00000031229 | |
| Species: | Mouse | |
| Class: | NA | |
| Family: | Others | |
| Disease: | -- | |
| Go-trem: | 45 | |
| Pathway: | 3 | |
| Super Enhancer: | chrX:105924151-105927335 chrX:105848655-105850798 chrX:105892135-105892642 chrX:105913936-105924035 chrX:105875404-105875896 chrX:105824122-105824951 chrX:105913238-105927151 chrX:105902257-105902981 chrX:105926013-105927173 chrX:105912313-105939926 chrX:105824329-105825038 |
|
| Enhancer: |
chrX:103119800-103124430 chrX:103202420-103207000 chrX:103215040-103216220 chrX:103222710-103226740 chrX:103238400-103244320 chrX:103269600-103271950 chrX:103279150-103280450 chrX:103280940-103281420 chrX:103343420-103348050 chrX:103392580-103393180 chrX:103206330-103207000 chrX:103222710-103223560 chrX:103222710-103222860 chrX:103206700-103207000 chrX:103222710-103222840 chrX:103206230-103207000 chrX:103222710-103222870 chrX:103206340-103207000 chrX:103222710-103223120 chrX:103121080-103124430 chrX:103206260-103207000 chrX:103222710-103223530 chrX:103413780-103414230 chrX:103414310-103414910 chrX:103415180-103416410 chrX:103206280-103207000 chrX:103222710-103223390 chrX:103414060-103414230 chrX:103205950-103207000 chrX:103215040-103215730 chrX:103225130-103228030 chrX:103288230-103288990 chrX:103343050-103343470 chrX:103206880-103207000 chrX:103414400-103414910 chrX:103415180-103415480 chrX:103120890-103124430 chrX:103205630-103207000 chrX:103222710-103225130 chrX:103238660-103245060 chrX:103206510-103207000 chrX:103222710-103222920 chrX:103287920-103288600 chrX:103206460-103207000 chrX:103118570-103120670 chrX:103134710-103135210 chrX:103119500-103124430 chrX:103205880-103207000 chrX:103222710-103223400 chrX:103415180-103415590 chrX:103206190-103207000 chrX:103222710-103223040 chrX:103206630-103207000 chrX:103237030-103242320 chrX:103238530-103240620 chrX:103222710-103222950 chrX:102968280-102969270 chrX:103206250-103207000 chrX:103206610-103207000 chrX:103222710-103222990 chrX:103206480-103207000 chrX:103222710-103223000 chrX:103204060-103207000 chrX:103206500-103207000 chrX:103280940-103281380 chrX:103204200-103207000 chrX:103222710-103225200 chrX:103288280-103289310 chrX:103414470-103414910 chrX:103415180-103415350 chrX:103414520-103414910 chrX:103415180-103415380 chrX:103240890-103241900 chrX:103019730-103020210 chrX:103141430-103142030 chrX:103205370-103207000 chrX:103237840-103241100 chrX:103277210-103278140 chrX:103308660-103309830 chrX:103343080-103344000 chrX:103349340-103350090 chrX:103395670-103397770 chrX:103398270-103398570 chrX:103206550-103207000 chrX:103206400-103207000 chrX:103222710-103223670 chrX:103239150-103239830 chrX:103342950-103348110 chrX:103275300-103278720 chrX:103206640-103207000 chrX:103222710-103223060 chrX:103206470-103207000 chrX:103206800-103207000 chrX:103120910-103122950 chrX:103206570-103207000 chrX:103222710-103222850 chrX:103239140-103239660 chrX:103121380-103121930 chrX:103206660-103207000 chrX:103206740-103207000 chrX:103239090-103239900 chrX:103121210-103121630 chrX:103134710-103134830 |
|
| Promoter: |
chrX:105927372-105931372 |
ChIP-seq based regulatory details of Atrx
| Sample ID | Experiment target | Biosample term name | Cell type | Tissue type | Source |
|---|---|---|---|---|---|
| TcoF_01_20829 | Atrx | None | Embryonic Fibroblast | None | Cistrome |
| TcoF_01_20828 | Atrx | None | erythroid | Liver | Cistrome |
| TcoF_01_20827 | Atrx | None | Embryonic Fibroblast | None | Cistrome |
| TcoF_01_20826 | Atrx | None | Neuronal Progenitor cell | Forebrain | Cistrome |
| TcoF_01_20825 | Atrx | None | Embryonic Fibroblast | None | Cistrome |
| TcoF_01_20824 | Atrx | None | Neuronal Progenitor cell | Forebrain | Cistrome |
| TcoF_01_20823 | Atrx | None | Neuronal Progenitor cell | Forebrain | Cistrome |
| TcoF_01_20822 | Atrx | None | Neuronal Progenitor cell | Forebrain | Cistrome |
| TcoF_01_20821 | Atrx | None | Neuronal Progenitor cell | Forebrain | Cistrome |
| TcoF_01_20820 | Atrx | None | Neuronal Progenitor cell | Forebrain | Cistrome |
| TcoF_01_20819 | Atrx | None | Neuronal Progenitor cell | Forebrain | Cistrome |
| TcoF_01_20818 | Atrx | None | Embryonic Stem Cell | None | Cistrome |
| TcoF_01_20817 | Atrx | J1 | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_20816 | Atrx | None | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_20815 | Atrx | None | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_20814 | Atrx | None | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_20813 | Atrx | None | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_20812 | Atrx | E14 | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_20811 | Atrx | R1 | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_20810 | Atrx | R1 | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_20809 | Atrx | R1 | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_20808 | Atrx | R1 | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_20807 | Atrx | R1 | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_20806 | Atrx | R1 | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_20805 | Atrx | None | Fibroblast | None | Cistrome |
| TcoF_01_20804 | Atrx | None | Fibroblast | None | Cistrome |
| TcoF_01_20803 | Atrx | None | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_20802 | Atrx | None | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_20801 | Atrx | None | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_20800 | Atrx | None | Embryonic Stem Cell | Embryo | Cistrome |
| TcoF_01_20799 | Atrx | None | Fibroblast | None | Cistrome |
| TcoF_01_20798 | Atrx | E14 | Embryonic Stem Cell | Embryo | Cistrome |
Downstream target genes of Atrx
Protein-protein interaction of Atrx
| OFFICIAL_SYMBOL_A | OFFICIAL_SYMBOL_B | EXPERIMENTAL_SYSTEM | PUBMED_ID | ORGANISM_A_ID | ORGANISM_B_ID | SOURCE |
|---|---|---|---|---|---|---|
| Atrx | Mecp2 | Affinity Capture-Western | 17296936 | 10090 | 10090 | BIOGRID |
| Atrx | Smc1a | Affinity Capture-Western | 20159591 | 10090 | 10090 | BIOGRID |
| Atrx | Smc3 | Affinity Capture-Western | 20159591 | 10090 | 10090 | BIOGRID |
| Atrx | Mecp2 | Affinity Capture-Western | 20159591 | 10090 | 10090 | BIOGRID |
| Atrx | Ar | Affinity Capture-Western | 21427128 | 10090 | 10090 | BIOGRID |
| Atrx | PARP1 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Atrx | CHD1 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Atrx | DAXX | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Atrx | ORC1 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Atrx | PWP2 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Atrx | TCEB1 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Atrx | TOP2A | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Atrx | TOP2B | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Atrx | UBTF | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Atrx | HIST2H2BE | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Atrx | CBX4 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Atrx | JADE3 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Atrx | RBX1 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Atrx | IVNS1ABP | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Atrx | KAT7 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Atrx | SUPT16H | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Atrx | BRWD1 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Atrx | PHIP | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Atrx | WDR76 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Atrx | ING5 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Atrx | DPY30 | Affinity Capture-MS | 26496610 | 10090 | 9606 | BIOGRID |
| Atrx | Xist | Affinity Capture-RNA | 25417162 | 10090 | 10090 | BIOGRID |
| Atrx | Xist | Protein-RNA | 25417162 | 10090 | 10090 | BIOGRID |
| Atrx | Ezh2 | Reconstituted Complex | 25417162 | 10090 | 10090 | BIOGRID |
| Atrx | Ezh2 | Affinity Capture-Western | 25417162 | 10090 | 10090 | BIOGRID |
Annotation of Atrx
Expression of Atrx
Disease information of Atrx