TcoF overview
TcoF: Cbx5
GeneID: 12419
Name: Chromobox protein homolog 5
Ensembl: ENSMUSG00000009575
Species: Mouse
Class: class HC
Family: Chromobox
Disease: --
Go-trem: 27
Pathway: 2
Super Enhancer:

chr15:103193183-103194387 chr15:103197527-103203003 chr15:103219647-103230429 chr15:103202178-103203063 chr15:103210072-103212279 chr15:103206665-103207895 chr15:103192418-103193323 chr15:103219094-103219997 chr15:103222638-103223310 chr15:103220757-103221385 chr15:103205431-103206023 chr15:103208612-103209127 chr15:103224879-103225501 chr15:103201616-103202259 chr15:103208499-103211288 chr15:103201751-103203032 chr15:103219865-103222087 chr15:103193374-103193861 chr15:103220052-103230467 chr15:103219707-103233386 chr15:103221029-103229476 chr15:103201768-103203370 chr15:103201742-103202936 chr15:103201927-103202485 chr15:103220838-103221583 chr15:103219999-103221720 chr15:103202211-103203518 chr15:103227206-103228180 chr15:103201729-103202839 chr15:103210381-103210865 chr15:103202004-103202813 chr15:103201853-103202730 chr15:103202089-103202478

Enhancer:

chr15:102752340-102753000 chr15:102915820-102922580 chr15:102992400-102993700 chr15:103031500-103034380 chr15:103043680-103045450 chr15:103045550-103045690 chr15:103045780-103048780 chr15:103049280-103054240 chr15:103055680-103064320 chr15:103103370-103103570 chr15:103115650-103119530 chr15:103127210-103128310 chr15:103128350-103129120 chr15:103140080-103140740 chr15:103146220-103146310 chr15:103146550-103148370 chr15:103148540-103150720 chr15:103187990-103189480 chr15:103190400-103196730 chr15:103207220-103216640 chr15:103301710-103301950 chr15:103325340-103327840 chr15:103355880-103356690 chr15:103456620-103459250 chr15:103087620-103088740 chr15:103119600-103121100 chr15:103191790-103192090 chr15:103195900-103196730 chr15:102888760-102892780 chr15:102898260-102902400 chr15:102915870-102922530 chr15:102931780-102933320 chr15:102993090-102993700 chr15:103044250-103045450 chr15:103045780-103046870 chr15:103072720-103072810 chr15:103074450-103074680 chr15:103115650-103117450 chr15:103131950-103137200 chr15:103148540-103149600 chr15:103187740-103187870 chr15:103195430-103196730 chr15:103087810-103088740 chr15:103082110-103082830 chr15:103083240-103083470 chr15:103083580-103084670 chr15:103088220-103088740 chr15:103045780-103046880 chr15:103115940-103116520 chr15:103127840-103128310 chr15:103130290-103131880 chr15:103153790-103154150 chr15:103344620-103345030 chr15:103353590-103353970 chr15:103349460-103350370 chr15:103196470-103196730 chr15:103045300-103045450 chr15:103045780-103046260 chr15:103115650-103116580 chr15:103195790-103196730 chr15:102993270-102993700 chr15:103284410-103285330 chr15:103045780-103047280 chr15:103284410-103285400 chr15:103087870-103088740 chr15:102976030-102976740 chr15:102992410-102993700 chr15:103014420-103015170 chr15:103130290-103132510 chr15:103146550-103147380 chr15:103182740-103182910 chr15:103184750-103185440 chr15:103188210-103189480 chr15:103189610-103190340 chr15:103190400-103192680 chr15:103334010-103336270 chr15:103343360-103345400 chr15:103360480-103360700 chr15:103361380-103361580 chr15:103168620-103170470 chr15:103333800-103333890 chr15:102992610-102993700 chr15:103043930-103045450 chr15:103045780-103047980 chr15:103183760-103184000 chr15:103184210-103184470 chr15:103190400-103192920 chr15:103194380-103196730 chr15:103207220-103209980 chr15:103345850-103350370 chr15:103350490-103351730 chr15:103352150-103352470 chr15:103352590-103354730 chr15:103167540-103170470 chr15:103045130-103045450 chr15:103045780-103046220 chr15:103072540-103072630 chr15:103075390-103076770 chr15:103163630-103164870 chr15:103191620-103192320 chr15:103208250-103209770 chr15:103088270-103088740 chr15:103082110-103082690 chr15:103086470-103088740 chr15:103045350-103045450 chr15:103072900-103073070 chr15:103074210-103074380 chr15:103148540-103150140 chr15:103163630-103170470 chr15:103186550-103186740 chr15:103186870-103187200 chr15:103187250-103187350 chr15:103187410-103187620 chr15:103192760-103196730 chr15:103293020-103293110 chr15:103293240-103294790 chr15:103306520-103308700 chr15:103308850-103309150 chr15:103309280-103312390 chr15:103334010-103334910 chr15:103343640-103345400 chr15:103345850-103348420 chr15:103186400-103186500 chr15:103300400-103301650 chr15:103044160-103045450 chr15:103045780-103047640 chr15:103125820-103126960 chr15:103131960-103136800 chr15:103163630-103166570 chr15:103195960-103196730 chr15:103240140-103243210 chr15:103352590-103354130 chr15:103088260-103088740 chr15:103348010-103350370 chr15:103087790-103088740 chr15:103081520-103081620 chr15:103083580-103085520 chr15:103087500-103088740 chr15:103045320-103045450 chr15:103046370-103046950 chr15:103349520-103350370 chr15:102931920-102933750 chr15:102986630-102988040 chr15:102993430-102993700 chr15:102934260-102934880 chr15:103014420-103015220 chr15:103045170-103045450 chr15:103045780-103047060 chr15:103073510-103074050 chr15:103075390-103076650 chr15:103130290-103131520 chr15:103194050-103196730 chr15:103240870-103243540 chr15:103168780-103170470 chr15:102934010-102934880 chr15:102910490-102921100 chr15:103044240-103045450 chr15:103045780-103047610 chr15:103125860-103126960 chr15:103130290-103135700 chr15:103164130-103165290 chr15:103350490-103350940 chr15:103125660-103126960 chr15:102993060-102993700 chr15:103044000-103045450 chr15:103045780-103047200 chr15:103125350-103126960 chr15:103130290-103137530 chr15:103188590-103189480 chr15:102884360-102900400 chr15:103195550-103196730 chr15:103044780-103045450 chr15:103045780-103046700 chr15:102897260-102902570 chr15:102912670-102918190 chr15:102929860-102934720 chr15:102990980-102991510 chr15:102991650-102992230 chr15:103045230-103045450 chr15:103045780-103048530 chr15:103075390-103076670 chr15:103076850-103076970 chr15:103112100-103113110 chr15:103148540-103150080 chr15:102929890-102934110 chr15:103044280-103045450 chr15:103073140-103073350 chr15:103132030-103136940 chr15:103148540-103150070 chr15:103165290-103170470 chr15:103083580-103083880 chr15:103087960-103088740 chr15:103045780-103046910 chr15:103131950-103136940 chr15:103184910-103185440 chr15:103190400-103191120 chr15:103194260-103196730 chr15:103207220-103210120 chr15:103212910-103215660 chr15:103130290-103136630 chr15:103194220-103196730 chr15:103207220-103210350 chr15:103131960-103137170 chr15:103190400-103192710 chr15:103194200-103196730 chr15:103207220-103210060 chr15:103212920-103215660 chr15:103044190-103045450 chr15:103045780-103046680 chr15:103115650-103116850 chr15:103137340-103138170 chr15:103190400-103192990 chr15:103194330-103196730 chr15:103207220-103210400 chr15:103211540-103216230 chr15:103343830-103345400 chr15:103087710-103088740 chr15:103167520-103170470 chr15:102888700-102892200 chr15:102932290-102933530 chr15:102976570-102976740 chr15:102986630-102987360 chr15:103014420-103014710 chr15:103130290-103135820 chr15:103164710-103165050 chr15:103196100-103196730 chr15:103334010-103334120 chr15:103345220-103345400 chr15:103345850-103346510 chr15:103350490-103350980 chr15:103353660-103354140 chr15:103348030-103350370 chr15:103196320-103196730 chr15:103045780-103049110 chr15:103054550-103070160 chr15:103191640-103196730 chr15:102888770-102892870 chr15:102901560-102902250 chr15:102920130-102921990 chr15:103045210-103045450 chr15:103045780-103046330 chr15:103116180-103116660 chr15:103121180-103121750 chr15:103195450-103196730 chr15:103212980-103214620 chr15:103119840-103121100 chr15:103044600-103045450 chr15:103045780-103047400 chr15:103049400-103052600 chr15:103194230-103196730 chr15:103308350-103308700 chr15:103309280-103312200 chr15:103343600-103345400 chr15:103345850-103346400 chr15:103352590-103354600 chr15:103045120-103045450 chr15:103045780-103048000 chr15:103163630-103170360 chr15:103352590-103354200 chr15:102752340-102752790 chr15:102889480-102892250 chr15:102904880-102906670 chr15:102932090-102933500 chr15:102958140-102960150 chr15:102976510-102976740 chr15:103014420-103014950 chr15:103045780-103047630 chr15:103118370-103119530 chr15:103125630-103126960 chr15:103163630-103166470 chr15:103188630-103189480 chr15:103194880-103196730 chr15:103213060-103214430 chr15:103119600-103120740 chr15:103168700-103170470 chr15:102891810-102892370 chr15:102958060-102960250 chr15:102992930-102993700 chr15:103045220-103045450 chr15:103115650-103116890 chr15:103125640-103126960 chr15:103130290-103137030 chr15:103146550-103147200 chr15:103188680-103189480 chr15:103194980-103196730 chr15:103207220-103209660 chr15:103213200-103214520 chr15:103343990-103344950 chr15:103119760-103120800 chr15:103045580-103045690 chr15:103075390-103076530 chr15:103032630-103033670 chr15:103045270-103045450 chr15:103045780-103046930 chr15:103115650-103117190 chr15:103126560-103126960 chr15:103131980-103136940 chr15:103195600-103196730 chr15:103213360-103214340 chr15:103007130-103007750 chr15:103032590-103033550 chr15:103044340-103045450 chr15:103045780-103047340 chr15:103137660-103138020 chr15:103195440-103196730 chr15:103207660-103208760 chr15:103044380-103045110 chr15:103045780-103046960 chr15:103050460-103052180 chr15:103059350-103059740 chr15:103132010-103133330 chr15:103195840-103196730 chr15:103207830-103209840 chr15:103213070-103214500 chr15:103088060-103088740 chr15:103169970-103170470 chr15:103049360-103054390 chr15:103183760-103183890 chr15:103190400-103191540 chr15:103192840-103196730 chr15:103147660-103148370 chr15:103148540-103150040 chr15:102899500-102902140 chr15:102912950-102913390 chr15:102932250-102932990 chr15:103192180-103196730 chr15:103293240-103293400 chr15:102956660-102957380 chr15:103167710-103170470 chr15:103284410-103284730 chr15:103163630-103166620 chr15:103130290-103135560 chr15:102993260-102993700 chr15:103045180-103045450 chr15:103045780-103046850 chr15:103130290-103132760 chr15:102923700-102924800 chr15:103168810-103170470 chr15:103190400-103193840 chr15:103087740-103088740 chr15:102886480-102902120 chr15:102920160-102922360 chr15:102931650-102940290 chr15:102976130-102976740 chr15:102992900-102993700 chr15:103043850-103045450 chr15:103045780-103047450 chr15:103115650-103117770 chr15:103127570-103128310 chr15:103130290-103137220 chr15:103195510-103196730 chr15:103207220-103209160 chr15:103343700-103345400 chr15:102923910-102924980 chr15:103128920-103129120 chr15:103130290-103131850 chr15:103045780-103045960 chr15:103163630-103165590 chr15:103191460-103192650 chr15:103293240-103294260 chr15:103087860-103088740 chr15:103169860-103170470 chr15:103195460-103196730 chr15:103163630-103165150 chr15:103186870-103186940 chr15:103191840-103192600 chr15:103088290-103088740 chr15:102993490-102993700 chr15:103044320-103045450 chr15:103045780-103047010 chr15:103207220-103209920 chr15:103212920-103215200 chr15:102993480-102993700 chr15:103045260-103045450 chr15:103045780-103046300 chr15:103147470-103148370 chr15:103148540-103148920 chr15:103153500-103154140 chr15:103045780-103045910 chr15:103163630-103165100 chr15:103191690-103192260 chr15:103284410-103285230 chr15:102888690-102892410 chr15:102932030-102933700 chr15:103045330-103045450 chr15:103045780-103046890 chr15:103115650-103116920 chr15:103195250-103196730 chr15:102993450-102993700 chr15:103334010-103334740 chr15:102987100-102987890 chr15:103045780-103046210 chr15:103259320-103260780 chr15:103275860-103277460 chr15:103278440-103278770 chr15:103309280-103310320 chr15:103045780-103048320 chr15:102958790-102959530 chr15:102993500-102993700 chr15:103088050-103088740 chr15:103168630-103170430 chr15:102891740-102892300 chr15:102993000-102993700 chr15:103059380-103060860 chr15:103116060-103116730 chr15:103130290-103133660 chr15:103196510-103196730 chr15:103212990-103214160 chr15:103344330-103344990 chr15:102890420-102891640 chr15:103045150-103045450 chr15:103046400-103046920 chr15:103193930-103196730 chr15:103240910-103243280 chr15:103167440-103169680 chr15:102891710-102892800 chr15:103115990-103117140 chr15:103148540-103149400 chr15:103163630-103165360 chr15:103195610-103196730 chr15:103344360-103345010 chr15:102890440-102891660 chr15:102993470-102993700 chr15:103045240-103045450 chr15:103045780-103046290 chr15:103213250-103213730 chr15:103241170-103242930

Promoter:

chr15:103237816-103241816

 ChIP-seq based regulatory details of Cbx5
Sample ID Experiment target Biosample term name Cell type Tissue type Source
TcoF_01_30193 Cbx5 Embryonic Stem Cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_30192 Cbx5 Embryonic Stem Cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_30191 Cbx5 Embryonic Stem Cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_30190 Cbx5 Embryonic Stem Cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_30189 Cbx5 Embryonic Stem Cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_30188 Cbx5 Embryonic Stem Cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_30187 Cbx5 Embryonic Stem Cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_30186 Cbx5 Embryonic Stem Cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_30079 Cbx5 Embryonic Stem Cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_30078 Cbx5 Embryonic Stem Cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_30077 Cbx5 Embryonic Stem Cells Pluripotent stem cell None ChIP_Atlas
TcoF_01_20769 Cbx5 mESC Embryonic Stem Cell None Cistrome
TcoF_01_20352 Cbx5 None Embryonic Stem Cell None Cistrome
TcoF_01_20272 Cbx5 None Neural Progenitor Cell None Cistrome
TcoF_01_20271 Cbx5 None Neural Progenitor Cell None Cistrome
TcoF_01_20024 Cbx5 None Hepatocyte Liver Cistrome
TcoF_01_20023 Cbx5 None Hepatocyte Liver Cistrome
 Downstream target genes of Cbx5
 Upstream regulatory details of Cbx5
 Protein-protein interaction of Cbx5
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
Cbx5 Cbx5 Reconstituted Complex 12565857 10090 10090 BIOGRID
Cbx5 H3F3A Affinity Capture-Western 17135209 10090 9913 BIOGRID
Cbx5 Lbr Reconstituted Complex 11571267 10090 10090 BIOGRID
Cbx5 H3f3a Reconstituted Complex 11571267 10090 10090 BIOGRID
Cbx5 Hist4h4 Reconstituted Complex 11571267 10090 10090 BIOGRID
Cbx5 Trim66 Reconstituted Complex 15322135 10090 10090 BIOGRID
Cbx5 Trim66 Affinity Capture-Western 15322135 10090 10090 BIOGRID
Cbx5 Chaf1a Affinity Capture-Western 15306854 10090 10090 BIOGRID
Cbx5 Chaf1b Affinity Capture-Western 15306854 10090 10090 BIOGRID
Cbx5 Trim28 Affinity Capture-Western 10562550 10090 10090 BIOGRID
Cbx5 Hist3 Protein-peptide 16127177 10090 10090 BIOGRID
Cbx5 Hist1h1e Protein-peptide 16127177 10090 10090 BIOGRID
Cbx5 Adnp Affinity Capture-Western 17222401 10090 10090 BIOGRID
Cbx5 Trim24 Affinity Capture-Western 8978696 10090 10090 BIOGRID
Cbx5 Trim28 Reconstituted Complex 10562550 10090 10090 BIOGRID
Cbx5 Trim24 Reconstituted Complex 10562550 10090 10090 BIOGRID
Cbx5 Trim28 Two-hybrid 10562550 10090 10090 BIOGRID
Cbx5 HDAC4 Reconstituted Complex 12242305 10090 9606 BIOGRID
Cbx5 HDAC5 Reconstituted Complex 12242305 10090 9606 BIOGRID
Cbx5 Hdac9 Reconstituted Complex 12242305 10090 10090 BIOGRID
Cbx5 SUV39H1 Affinity Capture-Western 12242305 10090 9606 BIOGRID
Cbx5 Hdac9 Phenotypic Enhancement 12242305 10090 10090 BIOGRID
Cbx5 MKI67 Reconstituted Complex 11793364 10090 9606 BIOGRID
Cbx5 Suv39h1 Affinity Capture-Western 28059589 10090 10090 BIOGRID
Cbx5 Zbtb7b Affinity Capture-Western 32098917 10090 10090 BIOGRID
Cbx5 Hdlbp Co-fractionation 32325033 10090 10090 BIOGRID
Cbx5 SOX2 Reconstituted Complex 31077711 10090 9606 BIOGRID
Cbx5 Sox2 Reconstituted Complex 31077711 10090 10090 BIOGRID
Cbx5 Trim28 Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Chaf1a Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Scai Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Senp7 Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Zfp280d Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Hnrnpf Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Zfp518b Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Pogz Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Ahdc1 Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Adnp Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Mis18bp1 Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Champ1 Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Zfp280c Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Lrif1 Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Rlf Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Rbbp4 Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Cbx3 Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 2410141K09Rik Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Chaf1b Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Rps11 Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Pcgf6 Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Incenp Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Cbx1 Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Hnrnpu Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Rps24 Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Hist1h3d Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Hist1h2bb Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Zfp518a Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Erh Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Glyr1 Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Hist1h1a Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Rpl23a Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Ran Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Eef2 Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Rpl31 Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 L3mbtl2 Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Rpl38 Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 H2-Ke6 Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Hist1h4d Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Zfp462 Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Mga Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Hnrnpa1 Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Ywhaz Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Rest Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Rpl22 Affinity Capture-MS 29795351 10090 10090 BIOGRID
Cbx5 Rps4x Affinity Capture-MS 29795351 10090 10090 BIOGRID
 Annotation of Cbx5
 Disease information of Cbx5