TcoF overview
TcoF: Ctr9
GeneID: 22083
Name: RNA polymerase-associated protein CTR9 homolog
Ensembl: ENSMUSG00000005609
Species: Mouse
Class: class HC
Family: Others
Disease: --
Go-trem: 32
Pathway: 12
Super Enhancer:

chr7:110998071-111005363 chr7:111002629-111003317 chr7:111054049-111054655 chr7:110989431-110990037 chr7:111023566-111025776 chr7:111022976-111026500 chr7:111053771-111056092 chr7:110989270-110991392 chr7:111004655-111005254 chr7:111023925-111024491 chr7:110989438-111003506 chr7:111023362-111023959 chr7:111051253-111051898 chr7:111023723-111024864 chr7:111023229-111025541 chr7:111023994-111024964 chr7:110989475-110990136 chr7:110998743-111005496 chr7:111023981-111024834 chr7:110988462-110989031 chr7:111023350-111038914 chr7:111053474-111060690 chr7:110990281-111003520 chr7:111002614-111006407 chr7:111023717-111025010 chr7:111023904-111024791 chr7:111023916-111024983 chr7:111023899-111024751 chr7:111023973-111024842 chr7:111003848-111004978 chr7:111003899-111004971 chr7:110997704-111005645

Enhancer:

chr7:117882120-117886500 chr7:117895120-117901350 chr7:117916410-117921310 chr7:117921530-117932120 chr7:117960360-117964760 chr7:117964870-117968730 chr7:118024680-118026200 chr7:118084200-118086920 chr7:118089700-118100320 chr7:118199890-118200390 chr7:118216270-118217340 chr7:118217460-118217550 chr7:118217760-118217850 chr7:118218050-118218190 chr7:118218450-118218530 chr7:118220590-118220730 chr7:118222060-118222800 chr7:118222900-118223690 chr7:118223830-118224410 chr7:118224470-118225020 chr7:118238450-118239700 chr7:118297100-118304580 chr7:118368950-118371720 chr7:117915400-117916110 chr7:118225140-118226290 chr7:118121580-118121820 chr7:118147670-118147960 chr7:118225470-118226290 chr7:118090940-118097920 chr7:117844520-117862480 chr7:118064900-118065690 chr7:118062580-118064820 chr7:118225400-118226290 chr7:118445060-118445660 chr7:118225350-118226290 chr7:117845120-117846580 chr7:118302400-118303130 chr7:117848920-117851000 chr7:118064260-118064650 chr7:118225170-118226290 chr7:118096480-118097510 chr7:118098800-118101050 chr7:118120910-118122130 chr7:118096260-118097880 chr7:118099470-118101100 chr7:118116710-118117600 chr7:118120370-118122290 chr7:117986310-117987850 chr7:118224880-118225020 chr7:118096550-118097230 chr7:118098950-118100880 chr7:118108860-118109490 chr7:118224660-118225020 chr7:118298550-118303900 chr7:118322580-118324330 chr7:118334510-118336680 chr7:117863830-117867070 chr7:117917280-117917570 chr7:117983610-117984400 chr7:118062800-118064820 chr7:117983810-117984720 chr7:118095940-118100670 chr7:117832840-117833270 chr7:118225520-118226290 chr7:118225390-118226290 chr7:117911890-117916110 chr7:117937370-117939190 chr7:118033120-118037050 chr7:118064900-118066970 chr7:118090670-118101140 chr7:118218950-118219100 chr7:118219220-118219790 chr7:117846000-117854950 chr7:118061040-118064820 chr7:118084790-118086270 chr7:118225210-118226290 chr7:117913840-117916110 chr7:117921530-117927110 chr7:118062850-118064820 chr7:118225300-118226290 chr7:118225230-118226290 chr7:117964390-117964760 chr7:118223590-118223690 chr7:118085440-118086160 chr7:118225220-118226290 chr7:117921530-117927020 chr7:117961210-117964760 chr7:117964870-117965120 chr7:118064900-118065840 chr7:118092610-118101130 chr7:118139920-118149720 chr7:118046380-118048490 chr7:118061620-118064820 chr7:117913880-117916110 chr7:117921530-117926100 chr7:117961860-117962950 chr7:117986620-117987850 chr7:118064900-118066590 chr7:118145150-118149450 chr7:118321510-118324950 chr7:118061880-118064820 chr7:117983880-117984280 chr7:118238590-118239120 chr7:118370230-118371040 chr7:118225580-118226290 chr7:117964870-117965580 chr7:118124170-118125520 chr7:118224300-118224410 chr7:118046300-118047750 chr7:118224020-118224410 chr7:117911890-117913490 chr7:117916410-117918700 chr7:117922900-117927340 chr7:117958470-117960040 chr7:117983880-117984130 chr7:118005930-118006290 chr7:118034180-118035830 chr7:118084250-118086720 chr7:118092950-118095160 chr7:118096270-118097240 chr7:118124070-118125520 chr7:118197440-118198870 chr7:118211140-118211490 chr7:118219220-118219330 chr7:117915420-117916110 chr7:118046030-118047740 chr7:118225450-118226290 chr7:118224580-118225020 chr7:118225500-118226290 chr7:117897370-117898090 chr7:117911890-117913550 chr7:118023670-118026400 chr7:118084710-118086310 chr7:118115270-118117500 chr7:118146120-118146750 chr7:118192050-118192770 chr7:118241440-118242540 chr7:118225310-118226290 chr7:117756640-117758220 chr7:117916410-117918600 chr7:117923600-117932120 chr7:117934860-117937150 chr7:117995870-117996340 chr7:117996420-117997210 chr7:117997500-118001200 chr7:118020490-118021650 chr7:118021770-118022800 chr7:118033000-118039300 chr7:118039440-118040000 chr7:118084200-118087000 chr7:118240400-118243200 chr7:118225270-118226290 chr7:118085220-118086020 chr7:117832360-117833380 chr7:117965120-117965480 chr7:118085320-118086120 chr7:118323060-118323760 chr7:118335260-118335480 chr7:117921530-117927170 chr7:117961640-117964400 chr7:118048610-118048940 chr7:118049060-118049210 chr7:118049360-118049510 chr7:118067580-118067820 chr7:118067870-118068040 chr7:118068100-118068760 chr7:118068840-118069080 chr7:118083520-118086460 chr7:118140540-118143560 chr7:118143660-118149810 chr7:118223110-118223690 chr7:118046110-118048490 chr7:118061510-118064820 chr7:117912370-117916110 chr7:118036860-118037980 chr7:118064900-118065770 chr7:118084110-118085880 chr7:118141660-118143570 chr7:118321150-118324880 chr7:118062280-118064820 chr7:117911890-117914760 chr7:117924480-117932120 chr7:117982760-117985390 chr7:118000560-118002870 chr7:118003270-118006290 chr7:118021770-118021970 chr7:118032220-118039300 chr7:118076770-118077790 chr7:117914930-117916110 chr7:118045790-118048490 chr7:118062700-118064820 chr7:117811810-117812970 chr7:117911890-117912960 chr7:117916540-117917220 chr7:117947720-117948330 chr7:117965130-117965920 chr7:117983740-117984220 chr7:118020490-118020700 chr7:118036370-118037920 chr7:118076840-118078820 chr7:118084670-118086090 chr7:118093880-118094320 chr7:118124350-118125520 chr7:117848890-117851150 chr7:118063710-118064820 chr7:118225190-118226290 chr7:117844090-117853940 chr7:117856210-117862060 chr7:117873630-117877350 chr7:117881990-117885180 chr7:117894680-117899880 chr7:117916410-117919770 chr7:117922730-117927940 chr7:117939320-117943990 chr7:117947410-117948330 chr7:117951460-117953300 chr7:118083730-118089340 chr7:118090610-118100160 chr7:118297700-118304380 chr7:118322810-118323690 chr7:118225150-118226290 chr7:118022320-118026400 chr7:118078360-118080770 chr7:118084040-118086180 chr7:118092660-118098960 chr7:118119840-118121510 chr7:118146190-118148140 chr7:117717060-117717890 chr7:117845230-117845550 chr7:117858530-117859060 chr7:117916410-117920440 chr7:117921530-117923440 chr7:117924280-117926870 chr7:117962250-117963380 chr7:117983500-117984660 chr7:118051030-118052670 chr7:118064900-118066420 chr7:118079750-118080640 chr7:118083720-118086460 chr7:118094960-118100260 chr7:118109700-118110970 chr7:118112840-118114040 chr7:118141200-118143980 chr7:118146860-118148890 chr7:118320770-118321370 chr7:118322160-118324830 chr7:117850230-117851100 chr7:118062000-118064820 chr7:118096010-118102330 chr7:118108500-118109550 chr7:117756890-117758220 chr7:117922810-117926120 chr7:117964230-117964760 chr7:117964870-117965960 chr7:118512880-118515040 chr7:117922920-117925240 chr7:118225430-118226290 chr7:118097390-118098100 chr7:118225330-118226290 chr7:117937070-117937150 chr7:118033730-118037060 chr7:118064900-118066570 chr7:118061060-118064820 chr7:117911890-117913560 chr7:117919770-117921310 chr7:117983000-117985520 chr7:118032650-118038760 chr7:118064900-118066540 chr7:118238680-118239120 chr7:117914590-117916110 chr7:118061010-118064820 chr7:117832860-117833300 chr7:118224730-118225020 chr7:117916410-117918070 chr7:117919770-117920800 chr7:117965640-117968730 chr7:117983600-117984560 chr7:118021770-118022230 chr7:118034840-118035580 chr7:118064900-118065740 chr7:118092660-118102910 chr7:118119880-118122290 chr7:118141610-118143660 chr7:118300810-118303150 chr7:117915930-117916110 chr7:118062790-118064820 chr7:118092830-118095680 chr7:118095770-118100370 chr7:117811210-117814340 chr7:117882340-117886620 chr7:117916410-117918910 chr7:117922830-117932120 chr7:117961100-117964760 chr7:117995870-117996320 chr7:118034310-118039300 chr7:118039440-118040540 chr7:118083620-118088600 chr7:118090670-118098050 chr7:118298470-118304210 chr7:118321270-118323750 chr7:117848820-117854660 chr7:118062030-118064760 chr7:117832000-117834760 chr7:118225360-118226290 chr7:118062120-118064820 chr7:117781830-117783400 chr7:117790550-117793260 chr7:117911890-117912720 chr7:117916680-117918070 chr7:117928140-117928820 chr7:118034290-118035510 chr7:118036960-118037940 chr7:118124490-118125520 chr7:118224860-118225020 chr7:118322950-118323670 chr7:118063770-118064820 chr7:117832590-117833500 chr7:118122500-118123020 chr7:118083410-118086580 chr7:118106960-118110290 chr7:118299730-118302460 chr7:118061930-118064770 chr7:118095210-118101180 chr7:118062810-118064690 chr7:118225340-118226290 chr7:118096020-118096910 chr7:118099390-118101210 chr7:118120340-118122160 chr7:118142700-118143440 chr7:118062800-118063880 chr7:117911890-117912970 chr7:118225380-118226290 chr7:117813530-117814220 chr7:117874410-117875920 chr7:117883050-117885080 chr7:117899750-117900580 chr7:117911890-117913400 chr7:117916410-117918810 chr7:117943910-117944150 chr7:118091800-118092860 chr7:118095760-118097460 chr7:118099030-118099820 chr7:118123380-118125520 chr7:118211040-118211490 chr7:117849640-117851100 chr7:117915800-117916110 chr7:117911890-117913110 chr7:117916580-117918510 chr7:117920270-117921310 chr7:117922470-117923490 chr7:117935330-117937150 chr7:118064900-118065080 chr7:118225420-118226290

Promoter:

chr7:111026950-111030950

 ChIP-seq based regulatory details of Ctr9
Sample ID Experiment target Biosample term name Cell type Tissue type Source
TcoF_01_30039 Ctr9 C2C12 Muscle Skeletal Muscle ChIP_Atlas
TcoF_01_30038 Ctr9 C2C12 Muscle Skeletal Muscle ChIP_Atlas
TcoF_01_20181 Ctr9 None Embryonic Stem Cell Embryo Cistrome
TcoF_01_20180 Ctr9 None Embryonic Stem Cell Embryo Cistrome
TcoF_01_20015 Ctr9 V6.5 Embryonic Stem Cell Embryo Cistrome
 Downstream target genes of Ctr9
 Upstream regulatory details of Ctr9
 Protein-protein interaction of Ctr9
OFFICIAL_SYMBOL_A OFFICIAL_SYMBOL_B EXPERIMENTAL_SYSTEM PUBMED_ID ORGANISM_A_ID ORGANISM_B_ID SOURCE
Ctr9 Paf1 Affinity Capture-MS 19345177 10090 10090 BIOGRID
Ctr9 Cdc73 Affinity Capture-MS 19345177 10090 10090 BIOGRID
Ctr9 Leo1 Affinity Capture-MS 19345177 10090 10090 BIOGRID
Ctr9 Wdr61 Affinity Capture-MS 19345177 10090 10090 BIOGRID
Ctr9 Pabpc1 Affinity Capture-MS 19345177 10090 10090 BIOGRID
Ctr9 Ruvbl1 Affinity Capture-MS 19345177 10090 10090 BIOGRID
Ctr9 Rcor2 Affinity Capture-MS 19345177 10090 10090 BIOGRID
Ctr9 Ruvbl2 Affinity Capture-MS 19345177 10090 10090 BIOGRID
Ctr9 Sfpq Affinity Capture-MS 19345177 10090 10090 BIOGRID
Ctr9 Cacna2d2 Co-fractionation 32325033 10090 10090 BIOGRID
Ctr9 Ciao1 Co-fractionation 32325033 10090 10090 BIOGRID
Ctr9 Paf1 Co-fractionation 32325033 10090 10090 BIOGRID
Ctr9 Supt16 Co-fractionation 32325033 10090 10090 BIOGRID
 Annotation of Ctr9
 Disease information of Ctr9